BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30819 (971 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 02_01_0170 - 1174224-1174321,1174429-1174588,1174673-1174823,117... 42 6e-04 11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228,530... 29 5.6 04_03_0659 - 18453778-18453903,18453976-18454963,18455496-184562... 29 5.6 04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607,690... 29 5.6 06_01_0789 - 5901888-5902940,5903685-5903824,5904606-5904665,590... 29 7.4 04_03_0114 + 11417041-11417188,11418325-11418399,11421007-114211... 29 7.4 01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848 28 9.8 >02_01_0170 - 1174224-1174321,1174429-1174588,1174673-1174823, 1175005-1175156,1175647-1175768,1176773-1176785 Length = 231 Score = 42.3 bits (95), Expect = 6e-04 Identities = 18/37 (48%), Positives = 27/37 (72%), Gaps = 3/37 (8%) Frame = +3 Query: 153 WDADNFEPKLPTTLA--ASNKWEGED-EDDNVKESWE 254 WD+++F+P +P+ A +KW ED E+D+VKESWE Sbjct: 4 WDSEDFQPAVPSAKAEPLKSKWADEDVEEDDVKESWE 40 Score = 30.3 bits (65), Expect = 2.4 Identities = 13/22 (59%), Positives = 16/22 (72%) Frame = +2 Query: 434 EKLRQQKLQEESDLRLAMETFG 499 EKLRQQ+L EE+D + E FG Sbjct: 90 EKLRQQRLVEEADFKSTTELFG 111 Score = 30.3 bits (65), Expect = 2.4 Identities = 10/41 (24%), Positives = 25/41 (60%) Frame = +1 Query: 523 LDNFHPTTKEEYTEFADLLTKKITFYKAKDEFPGFIXDLVK 645 LD F P ++ ++ E+A+L+ K+ Y+ + G + ++++ Sbjct: 120 LDTFIPKSESDFAEYAELIANKLRPYEKSFHYMGLLKNVMR 160 >11_01_0656 - 5301048-5301441,5301779-5301976,5302056-5302228, 5302691-5302935,5303014-5303191,5303578-5303760, 5303858-5303962,5304621-5304758,5304846-5305802 Length = 856 Score = 29.1 bits (62), Expect = 5.6 Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 3/50 (6%) Frame = +1 Query: 514 IGKLDNFHPTTKEEYTEFADLLTKKITF---YKAKDEFPGFIXDLVKNIL 654 +G LD F P EY F D + K YK KDE F+ D+ + L Sbjct: 552 MGDLDAFFPAATREYAPFVDEMWKDPAIQATYKRKDEL-HFLPDVAEYFL 600 >04_03_0659 - 18453778-18453903,18453976-18454963,18455496-18456229, 18456292-18456360,18456528-18456605,18456703-18456789, 18456881-18456931,18457021-18457092,18457177-18457304, 18458194-18458275,18458705-18458754,18459043-18459096, 18459586-18459675,18459903-18459983,18460443-18460538, 18460960-18461022,18461313-18461402,18461630-18461698, 18462051-18462291 Length = 1082 Score = 29.1 bits (62), Expect = 5.6 Identities = 23/76 (30%), Positives = 36/76 (47%) Frame = +3 Query: 30 SRTSGSPGLQEFGTRSDFGVQVKSFHINSAADSGVLKMDVSWDADNFEPKLPTTLAASNK 209 S+ S S QE T S+F ++F NS + D+ +D D + A +N+ Sbjct: 364 SQPSISEVQQEISTESNFVATPRAFQ-NSMILTTSRTEDIPFDMDYAD----MDYADTNQ 418 Query: 210 WEGEDEDDNVKESWEM 257 E ED +DN E+W + Sbjct: 419 VEDEDLEDNELENWNL 434 >04_01_0526 - 6901003-6901056,6901070-6901404,6901423-6901607, 6902201-6904641 Length = 1004 Score = 29.1 bits (62), Expect = 5.6 Identities = 16/60 (26%), Positives = 30/60 (50%) Frame = +1 Query: 514 IGKLDNFHPTTKEEYTEFADLLTKKITFYKAKDEFPGFIXDLVKNILVQMFXSGYPTNKI 693 + K+D P T++E+ ++ T TF+K GF + + +LV F + P N++ Sbjct: 552 VKKIDKLQPETEKEF--MVEVETIGQTFHKNLVRLLGFCNEGAERLLVYEFMTNGPLNRL 609 >06_01_0789 - 5901888-5902940,5903685-5903824,5904606-5904665, 5904794-5904854 Length = 437 Score = 28.7 bits (61), Expect = 7.4 Identities = 28/129 (21%), Positives = 53/129 (41%) Frame = +2 Query: 401 AEEMTPEQKXAEKLRQQKLQEESDLRLAMETFGVTEVTLVNLTISTQLQKKSTXXXXXXX 580 ++ +T + ++L ++QEESDLR+ ++ F V L L + + K+ Sbjct: 107 SKSLTSKLYLKQQLYGLQMQEESDLRMHVDVFNQLIVDLSKLDVKLDDEDKAIILLCSLP 166 Query: 581 XXXXXXXKPRMSFQDSLXT*SRIF*SRCSSADIRRIKLTVDNSXF*KTEGRXRLIKLKKG 760 +D++ T I S + D+RR K N ++ L+K K Sbjct: 167 PSYEHVVTTLTYGKDTVKTEEII--SSLLARDLRRSK---KNEAMEASQAESLLVKAKHD 221 Query: 761 HXGARARAK 787 H +++K Sbjct: 222 HEAGVSKSK 230 >04_03_0114 + 11417041-11417188,11418325-11418399,11421007-11421107, 11422049-11422120,11422239-11422757,11422949-11423149 Length = 371 Score = 28.7 bits (61), Expect = 7.4 Identities = 28/113 (24%), Positives = 44/113 (38%) Frame = +2 Query: 455 LQEESDLRLAMETFGVTEVTLVNLTISTQLQKKSTXXXXXXXXXXXXXXKPRMSFQDSLX 634 +QEESDLR ++ F V L L + + K+ M +D++ Sbjct: 133 MQEESDLRKHVDVFNQLVVDLSKLDVKLDDEDKAIILLCSLPPSYEHVVTTLMHGKDTIK 192 Query: 635 T*SRIF*SRCSSADIRRIKLTVDNSXF*KTEGRXRLIKLKKGHXGARARAKFK 793 T I S + D+RR K N ++ L+K K H ++K K Sbjct: 193 TEEII--SSLLARDLRRSK---KNEAMEASQAESLLVKAKHDHEAGVLKSKEK 240 >01_06_1029 - 33923733-33924679,33925448-33925459,33925770-33925848 Length = 345 Score = 28.3 bits (60), Expect = 9.8 Identities = 17/77 (22%), Positives = 33/77 (42%) Frame = +3 Query: 24 GRSRTSGSPGLQEFGTRSDFGVQVKSFHINSAADSGVLKMDVSWDADNFEPKLPTTLAAS 203 G TS +PG Q++ T + H+ ++ ++ V+WD +P T +S Sbjct: 159 GDGETSNTPG-QQYPTNWNN-------HVKQPTEANCMQSSVNWDNYVSQPPQATVQQSS 210 Query: 204 NKWEGEDEDDNVKESWE 254 W+ + + +WE Sbjct: 211 GNWDMYVKQQDQANNWE 227 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 21,575,723 Number of Sequences: 37544 Number of extensions: 388465 Number of successful extensions: 1087 Number of sequences better than 10.0: 7 Number of HSP's better than 10.0 without gapping: 1053 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1086 length of database: 14,793,348 effective HSP length: 82 effective length of database: 11,714,740 effective search space used: 2823252340 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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