Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30819
         (971 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulf...    27   1.1  
AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulf...    27   1.1  
AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reduct...    27   1.1  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            25   4.5  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            25   4.5  

>AJ549085-1|CAD70159.1|  529|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 529

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 15  AVGGRSRTSGSPGLQEFGTRSD 80
           AVGGR R    PG  E+G  SD
Sbjct: 187 AVGGRPRYPDIPGAAEYGITSD 208


>AJ549084-1|CAD70158.1|  505|Anopheles gambiae thioredoxin-disulfide
           reductase protein.
          Length = 505

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 15  AVGGRSRTSGSPGLQEFGTRSD 80
           AVGGR R    PG  E+G  SD
Sbjct: 163 AVGGRPRYPDIPGAAEYGITSD 184


>AJ459821-1|CAD30858.1|  502|Anopheles gambiae thioredoxin reductase
           protein.
          Length = 502

 Score = 26.6 bits (56), Expect = 1.1
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = +3

Query: 15  AVGGRSRTSGSPGLQEFGTRSD 80
           AVGGR R    PG  E+G  SD
Sbjct: 160 AVGGRPRYPDIPGAAEYGITSD 181


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 737  RLIKLKKGHXGARARAKF 790
            +L+KLK  H G   RAKF
Sbjct: 2148 KLLKLKPSHLGTGRRAKF 2165


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 10/18 (55%), Positives = 12/18 (66%)
 Frame = +2

Query: 737  RLIKLKKGHXGARARAKF 790
            +L+KLK  H G   RAKF
Sbjct: 2149 KLLKLKPSHLGTGRRAKF 2166



 Score = 24.2 bits (50), Expect = 6.0
 Identities = 11/33 (33%), Positives = 16/33 (48%)
 Frame = +1

Query: 502  NRSNIGKLDNFHPTTKEEYTEFADLLTKKITFY 600
            NR++   LDN     KE++  F   +    TFY
Sbjct: 3221 NRNSGNWLDNIFKDIKEDFNVFLSTVNPSRTFY 3253


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 793,405
Number of Sequences: 2352
Number of extensions: 12836
Number of successful extensions: 20
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106063542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)