Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30819
         (971 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p pro...    49   8e-06
AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA...    49   8e-06
X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like p...    40   0.007
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    30   5.5  
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    30   5.5  

>AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p
           protein.
          Length = 236

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%)
 Frame = +1

Query: 508 SNIGKLDNFHPTTKEEYTEFADLLTKKITFYKAKDEFPGFIXDLVKNILVQM 663
           S  G LD F+P TKEE+ EF   L+ K+  ++  + FP F+ DLV+++ V +
Sbjct: 120 STCGGLDAFNPETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNL 171



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 32/103 (31%), Positives = 46/103 (44%)
 Frame = +2

Query: 395 KTAEEMTPEQKXAEKLRQQKLQEESDLRLAMETFGVTEVTLVNLTISTQLQKKSTXXXXX 574
           K    ++P +K AEKLR QK+QE SDL+ A E FGVT  T   L       K+       
Sbjct: 83  KRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTS-TCGGLDAFNPETKEEFKEFGA 141

Query: 575 XXXXXXXXXKPRMSFQDSLXT*SRIF*SRCSSADIRRIKLTVD 703
                    +    F   +    R      S+ADI+++K+ V+
Sbjct: 142 TLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVE 184



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 PTTLAASNKWEGEDEDDNVKESWE 254
           PT  A+ NKWEGEDED+++K+SWE
Sbjct: 17  PTAAASVNKWEGEDEDEDIKDSWE 40


>AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA
           protein.
          Length = 236

 Score = 49.2 bits (112), Expect = 8e-06
 Identities = 21/52 (40%), Positives = 33/52 (63%)
 Frame = +1

Query: 508 SNIGKLDNFHPTTKEEYTEFADLLTKKITFYKAKDEFPGFIXDLVKNILVQM 663
           S  G LD F+P TKEE+ EF   L+ K+  ++  + FP F+ DLV+++ V +
Sbjct: 120 STCGGLDAFNPETKEEFKEFGATLSWKVGQFRESEHFPQFVEDLVRSLCVNL 171



 Score = 46.4 bits (105), Expect = 6e-05
 Identities = 32/103 (31%), Positives = 46/103 (44%)
 Frame = +2

Query: 395 KTAEEMTPEQKXAEKLRQQKLQEESDLRLAMETFGVTEVTLVNLTISTQLQKKSTXXXXX 574
           K    ++P +K AEKLR QK+QE SDL+ A E FGVT  T   L       K+       
Sbjct: 83  KRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVTS-TCGGLDAFNPETKEEFKEFGA 141

Query: 575 XXXXXXXXXKPRMSFQDSLXT*SRIF*SRCSSADIRRIKLTVD 703
                    +    F   +    R      S+ADI+++K+ V+
Sbjct: 142 TLSWKVGQFRESEHFPQFVEDLVRSLCVNLSAADIKKVKMNVE 184



 Score = 45.2 bits (102), Expect = 1e-04
 Identities = 16/24 (66%), Positives = 21/24 (87%)
 Frame = +3

Query: 183 PTTLAASNKWEGEDEDDNVKESWE 254
           PT  A+ NKWEGEDED+++K+SWE
Sbjct: 17  PTAAASVNKWEGEDEDEDIKDSWE 40


>X85998-1|CAA59990.1|  110|Drosophila melanogaster elastin like
          protein protein.
          Length = 110

 Score = 39.5 bits (88), Expect = 0.007
 Identities = 17/17 (100%), Positives = 17/17 (100%)
 Frame = +1

Query: 22 AAALELVDPPGCRNSAR 72
          AAALELVDPPGCRNSAR
Sbjct: 7  AAALELVDPPGCRNSAR 23


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 383 LVTEKTAEEMTPEQKXAEKLRQQKLQE-ESDLRLAMET 493
           L+ +K  EE   E+K  EK RQ+KL+E E + +L  ET
Sbjct: 42  LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 79


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 29.9 bits (64), Expect = 5.5
 Identities = 17/38 (44%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = +2

Query: 383 LVTEKTAEEMTPEQKXAEKLRQQKLQE-ESDLRLAMET 493
           L+ +K  EE   E+K  EK RQ+KL+E E + +L  ET
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,761,932
Number of Sequences: 53049
Number of extensions: 613883
Number of successful extensions: 1842
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1842
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4874050314
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)