BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30818 (758 letters) Database: uniref50 1,657,284 sequences; 575,637,011 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intro... 41 0.029 UniRef50_Q2GZU6 Cluster: Putative uncharacterized protein; n=1; ... 36 0.82 UniRef50_Q007R7 Cluster: Patched protein; n=4; Eukaryota|Rep: Pa... 31 0.95 UniRef50_Q9V426 Cluster: CG4170-PA, isoform A; n=2; Sophophora|R... 36 1.4 UniRef50_Q54KT2 Cluster: Putative uncharacterized protein; n=1; ... 30 3.7 >UniRef50_UPI000051ACE1 Cluster: PREDICTED: similar to vasa intronic gene CG4170-PA, isoform A; n=1; Apis mellifera|Rep: PREDICTED: similar to vasa intronic gene CG4170-PA, isoform A - Apis mellifera Length = 414 Score = 41.1 bits (92), Expect = 0.029 Identities = 25/67 (37%), Positives = 31/67 (46%) Frame = +1 Query: 1 EDLSQWKNLVLLXXXXXXXXXXXXXXXXXXXXXXXPQRVGRQKRLLGIEFTFTLRCDARR 180 EDL++WK + L PQRVGRQKR+LGIE F+ D+RR Sbjct: 296 EDLTRWKKMYALERKKEGADDEEEEEEEYDAAAEYPQRVGRQKRVLGIEIQFS---DSRR 352 Query: 181 CGRARPR 201 R R Sbjct: 353 GSGGRGR 359 >UniRef50_Q2GZU6 Cluster: Putative uncharacterized protein; n=1; Chaetomium globosum|Rep: Putative uncharacterized protein - Chaetomium globosum (Soil fungus) Length = 609 Score = 36.3 bits (80), Expect = 0.82 Identities = 16/42 (38%), Positives = 21/42 (50%), Gaps = 1/42 (2%) Frame = -2 Query: 148 TQCPTNASG-DPRAVDSRPDRIPRQFPHHHHGHLPSCVPTEP 26 TQ PT+ + P +D P + P Q PHHHHG +P Sbjct: 507 TQPPTSQNPTQPSELDPNPHQHPHQHPHHHHGQYQHASELDP 548 >UniRef50_Q007R7 Cluster: Patched protein; n=4; Eukaryota|Rep: Patched protein - Lytechinus variegatus (Sea urchin) Length = 1416 Score = 30.7 bits (66), Expect(2) = 0.95 Identities = 13/25 (52%), Positives = 15/25 (60%) Frame = -2 Query: 79 QFPHHHHGHLPSCVPTEPGFSTGSS 5 Q+PHHHH H P C FST +S Sbjct: 1299 QYPHHHHQH-PHCSRQSFPFSTNNS 1322 Score = 24.2 bits (50), Expect(2) = 0.95 Identities = 9/26 (34%), Positives = 14/26 (53%), Gaps = 1/26 (3%) Frame = -2 Query: 127 SGDPRAVDSRPDRIPRQFPH-HHHGH 53 + P + +RP R ++PH HH H Sbjct: 1267 ANSPNSQRTRPQRTSSKYPHRQHHQH 1292 >UniRef50_Q9V426 Cluster: CG4170-PA, isoform A; n=2; Sophophora|Rep: CG4170-PA, isoform A - Drosophila melanogaster (Fruit fly) Length = 490 Score = 35.5 bits (78), Expect = 1.4 Identities = 23/62 (37%), Positives = 29/62 (46%) Frame = +1 Query: 1 EDLSQWKNLVLLXXXXXXXXXXXXXXXXXXXXXXXPQRVGRQKRLLGIEFTFTLRCDARR 180 ED +QWK +V+L PQRVGRQ+R+L I+F F D RR Sbjct: 321 EDTTQWKKMVVLTSNKKKENDSEEELEYDPALY--PQRVGRQQRVLDIQFNFN---DGRR 375 Query: 181 CG 186 G Sbjct: 376 GG 377 >UniRef50_Q54KT2 Cluster: Putative uncharacterized protein; n=1; Dictyostelium discoideum AX4|Rep: Putative uncharacterized protein - Dictyostelium discoideum AX4 Length = 72 Score = 29.9 bits (64), Expect(2) = 3.7 Identities = 10/15 (66%), Positives = 11/15 (73%) Frame = -2 Query: 70 HHHHGHLPSCVPTEP 26 HHHH HLPS P+ P Sbjct: 40 HHHHHHLPSSPPSPP 54 Score = 23.4 bits (48), Expect(2) = 3.7 Identities = 6/8 (75%), Positives = 7/8 (87%) Frame = -2 Query: 76 FPHHHHGH 53 +PHHHH H Sbjct: 16 YPHHHHHH 23 Database: uniref50 Posted date: Oct 5, 2007 11:19 AM Number of letters in database: 575,637,011 Number of sequences in database: 1,657,284 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 628,871,676 Number of Sequences: 1657284 Number of extensions: 10313352 Number of successful extensions: 32896 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 30976 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 32722 length of database: 575,637,011 effective HSP length: 99 effective length of database: 411,565,895 effective search space used: 62969581935 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -