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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30818
         (758 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical...    29   3.6  
Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical pr...    28   8.3  
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.     28   8.3  
AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical ...    28   8.3  
AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical...    28   8.3  
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso...    28   8.3  
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso...    28   8.3  
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso...    28   8.3  
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso...    28   8.3  
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.     28   8.3  

>AC025716-10|AAK39607.1|  474|Caenorhabditis elegans Hypothetical
           protein Y39G10AR.7 protein.
          Length = 474

 Score = 29.1 bits (62), Expect = 3.6
 Identities = 14/40 (35%), Positives = 17/40 (42%)
 Frame = -2

Query: 142 CPTNASGDPRAVDSRPDRIPRQFPHHHHGHLPSCVPTEPG 23
           CP  +S         P +I   F H  H   PSC+PT  G
Sbjct: 91  CPKPSSESAFPFPISPTQIDLPFGHTAHDRKPSCLPTPRG 130


>Z48783-4|CAA88698.1|  359|Caenorhabditis elegans Hypothetical
           protein F33H1.3 protein.
          Length = 359

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = -2

Query: 124 GDPRAVDSRPDRIPRQFPHHHHGHLP 47
           G P + +S P R+P    HHHH H P
Sbjct: 233 GPPSSYNSMPTRMP----HHHHHHHP 254


>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
          Length = 4250

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1146 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1178


>AL132951-7|CAD89753.2|  608|Caenorhabditis elegans Hypothetical
           protein Y67H2A.10 protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 11/24 (45%), Positives = 15/24 (62%)
 Frame = -2

Query: 79  QFPHHHHGHLPSCVPTEPGFSTGS 8
           Q  HHHH  +P+  P EP  S+G+
Sbjct: 214 QQQHHHHQQIPTSAP-EPSVSSGT 236


>AL110485-27|CAB60369.3|  515|Caenorhabditis elegans Hypothetical
           protein Y46G5A.26a protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = -3

Query: 114 ALWIVGQIVFLVSFLIITTVTFLLAFQQNQVFP 16
           +LW+  +  F     II T+TFLL F  N+V P
Sbjct: 307 SLWMENETSFQDMISIILTITFLL-FSYNEVMP 338


>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform b protein.
          Length = 4203

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1063 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1095


>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform a protein.
          Length = 4488

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416


>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform d protein.
          Length = 4369

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416


>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
            actin-binding)homolog protein 1, isoform c protein.
          Length = 4447

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416


>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
          Length = 4219

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
 Frame = -2

Query: 436  YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
            Y  +NILY Y ++N TY +++ N + E +  +D
Sbjct: 1079 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1111


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,373,707
Number of Sequences: 27780
Number of extensions: 247703
Number of successful extensions: 823
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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