Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30818
(758 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 29 3.6
Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 28 8.3
AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 8.3
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 28 8.3
AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 28 8.3
AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 8.3
AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 8.3
AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 8.3
AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 8.3
AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 8.3
>AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical
protein Y39G10AR.7 protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/40 (35%), Positives = 17/40 (42%)
Frame = -2
Query: 142 CPTNASGDPRAVDSRPDRIPRQFPHHHHGHLPSCVPTEPG 23
CP +S P +I F H H PSC+PT G
Sbjct: 91 CPKPSSESAFPFPISPTQIDLPFGHTAHDRKPSCLPTPRG 130
>Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical
protein F33H1.3 protein.
Length = 359
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -2
Query: 124 GDPRAVDSRPDRIPRQFPHHHHGHLP 47
G P + +S P R+P HHHH H P
Sbjct: 233 GPPSSYNSMPTRMP----HHHHHHHP 254
>AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein.
Length = 4250
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1146 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1178
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 27.9 bits (59), Expect = 8.3
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = -2
Query: 79 QFPHHHHGHLPSCVPTEPGFSTGS 8
Q HHHH +P+ P EP S+G+
Sbjct: 214 QQQHHHHQQIPTSAP-EPSVSSGT 236
>AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical
protein Y46G5A.26a protein.
Length = 515
Score = 27.9 bits (59), Expect = 8.3
Identities = 14/33 (42%), Positives = 19/33 (57%)
Frame = -3
Query: 114 ALWIVGQIVFLVSFLIITTVTFLLAFQQNQVFP 16
+LW+ + F II T+TFLL F N+V P
Sbjct: 307 SLWMENETSFQDMISIILTITFLL-FSYNEVMP 338
>AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform b protein.
Length = 4203
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1063 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1095
>AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform a protein.
Length = 4488
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416
>AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform d protein.
Length = 4369
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416
>AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila
actin-binding)homolog protein 1, isoform c protein.
Length = 4447
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416
>AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein.
Length = 4219
Score = 27.9 bits (59), Expect = 8.3
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Frame = -2
Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341
Y +NILY Y ++N TY +++ N + E + +D
Sbjct: 1079 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1111
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,373,707
Number of Sequences: 27780
Number of extensions: 247703
Number of successful extensions: 823
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 740
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 821
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1809061256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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