BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30818 (758 letters) Database: celegans 27,780 sequences; 12,740,198 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical... 29 3.6 Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical pr... 28 8.3 AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. 28 8.3 AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 28 8.3 AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical... 28 8.3 AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (droso... 28 8.3 AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (droso... 28 8.3 AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (droso... 28 8.3 AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (droso... 28 8.3 AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. 28 8.3 >AC025716-10|AAK39607.1| 474|Caenorhabditis elegans Hypothetical protein Y39G10AR.7 protein. Length = 474 Score = 29.1 bits (62), Expect = 3.6 Identities = 14/40 (35%), Positives = 17/40 (42%) Frame = -2 Query: 142 CPTNASGDPRAVDSRPDRIPRQFPHHHHGHLPSCVPTEPG 23 CP +S P +I F H H PSC+PT G Sbjct: 91 CPKPSSESAFPFPISPTQIDLPFGHTAHDRKPSCLPTPRG 130 >Z48783-4|CAA88698.1| 359|Caenorhabditis elegans Hypothetical protein F33H1.3 protein. Length = 359 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/26 (46%), Positives = 15/26 (57%) Frame = -2 Query: 124 GDPRAVDSRPDRIPRQFPHHHHGHLP 47 G P + +S P R+P HHHH H P Sbjct: 233 GPPSSYNSMPTRMP----HHHHHHHP 254 >AY819766-1|AAV69856.1| 4250|Caenorhabditis elegans kettin protein. Length = 4250 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1146 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1178 >AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical protein Y67H2A.10 protein. Length = 608 Score = 27.9 bits (59), Expect = 8.3 Identities = 11/24 (45%), Positives = 15/24 (62%) Frame = -2 Query: 79 QFPHHHHGHLPSCVPTEPGFSTGS 8 Q HHHH +P+ P EP S+G+ Sbjct: 214 QQQHHHHQQIPTSAP-EPSVSSGT 236 >AL110485-27|CAB60369.3| 515|Caenorhabditis elegans Hypothetical protein Y46G5A.26a protein. Length = 515 Score = 27.9 bits (59), Expect = 8.3 Identities = 14/33 (42%), Positives = 19/33 (57%) Frame = -3 Query: 114 ALWIVGQIVFLVSFLIITTVTFLLAFQQNQVFP 16 +LW+ + F II T+TFLL F N+V P Sbjct: 307 SLWMENETSFQDMISIILTITFLL-FSYNEVMP 338 >AF106579-4|AAK82895.1| 4203|Caenorhabditis elegans Kettin (drosophila actin-binding)homolog protein 1, isoform b protein. Length = 4203 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1063 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1095 >AF106579-3|ABS19464.1| 4488|Caenorhabditis elegans Kettin (drosophila actin-binding)homolog protein 1, isoform a protein. Length = 4488 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416 >AF106579-2|AAM45364.1| 4369|Caenorhabditis elegans Kettin (drosophila actin-binding)homolog protein 1, isoform d protein. Length = 4369 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416 >AF106579-1|AAM45363.1| 4447|Caenorhabditis elegans Kettin (drosophila actin-binding)homolog protein 1, isoform c protein. Length = 4447 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1384 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1416 >AB026846-1|BAA90302.2| 4219|Caenorhabditis elegans kettin protein. Length = 4219 Score = 27.9 bits (59), Expect = 8.3 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%) Frame = -2 Query: 436 YTLVNILYIYFKNNSTY-IIICNSSFEREKNLD 341 Y +NILY Y ++N TY +++ N + E + +D Sbjct: 1079 YIALNILYCYPEDNGTYTLVVRNRAGEAQSTVD 1111 Database: celegans Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 12,740,198 Number of sequences in database: 27,780 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 14,373,707 Number of Sequences: 27780 Number of extensions: 247703 Number of successful extensions: 823 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 740 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 821 length of database: 12,740,198 effective HSP length: 80 effective length of database: 10,517,798 effective search space used: 1809061256 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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