Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30812
(749 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.015
SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0) 34 0.14
SB_24697| Best HMM Match : Filament (HMM E-Value=0.11) 33 0.19
SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33) 33 0.19
SB_2296| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 33 0.33
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.33
SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1) 31 0.76
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 31 0.76
SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07) 31 1.00
SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28) 30 1.7
SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0) 30 1.7
SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06) 30 2.3
SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11) 30 2.3
SB_1296| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.3
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 3.0
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_26603| Best HMM Match : SNF (HMM E-Value=0) 29 3.0
SB_17575| Best HMM Match : CBM_19 (HMM E-Value=9.6) 29 3.0
SB_27628| Best HMM Match : His_kinase (HMM E-Value=3.7) 29 4.0
SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 29 4.0
SB_978| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27) 29 4.0
SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6) 29 4.0
SB_14528| Best HMM Match : CXCXC (HMM E-Value=8.1) 29 4.0
SB_34876| Best HMM Match : TehB (HMM E-Value=5.4) 29 5.3
SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_26703| Best HMM Match : TehB (HMM E-Value=5.4) 29 5.3
SB_51107| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64) 28 7.0
SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_34592| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_21297| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 9.3
SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05) 28 9.3
>SB_18600| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2388
Score = 37.1 bits (82), Expect = 0.015
Identities = 19/74 (25%), Positives = 39/74 (52%)
Frame = +2
Query: 503 GGEESINSITEELVAASDKAKEGQGTWRTGRKRNMPIKLLRPPTKSRRKRPLPKAKTVNF 682
G +S+ + ++++ A + ++ + +TG IK +P +K+R+KR AK NF
Sbjct: 1905 GKRKSMLAKSKDVKNAEEASRNDEDDTKTGNVSEDLIKQAKPTSKTRKKRASLSAKVTNF 1964
Query: 683 ERRVQTKLDYSCSK 724
E+ V ++ S+
Sbjct: 1965 EKTVNVDVESQSSE 1978
>SB_11152| Best HMM Match : Myosin_head (HMM E-Value=0)
Length = 1997
Score = 33.9 bits (74), Expect = 0.14
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +3
Query: 282 EQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAI 461
EQG + + EL+DL +LDE + +EL K ++I K K+ +Q +H+QA+
Sbjct: 1170 EQGKELEHELDDLNERLDEQGGATQAQMELNK---KRESDIIKLRKDLEEQAL-AHEQAV 1225
Query: 462 QA 467
+
Sbjct: 1226 NS 1227
Score = 32.3 bits (70), Expect = 0.43
Identities = 23/80 (28%), Positives = 40/80 (50%), Gaps = 3/80 (3%)
Frame = +3
Query: 270 RDLLEQGHDRQE---ELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVT 440
+D+LEQ D +E EL+ + KL+ + K D+E ATL E K + +Q+
Sbjct: 911 KDMLEQLEDEEEASAELSSVKHKLEGEISDLKQDIEELDATLKKVEEEGKQKDKNIEQLN 970
Query: 441 ESHKQAIQATMDVPAVQEKV 500
E +Q +A + +++V
Sbjct: 971 EELQQQDEAIAKLQKAKKQV 990
>SB_24697| Best HMM Match : Filament (HMM E-Value=0.11)
Length = 266
Score = 33.5 bits (73), Expect = 0.19
Identities = 14/34 (41%), Positives = 23/34 (67%)
Frame = +1
Query: 145 NKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHN 246
NKLHEDS+E+ RTI + ++ ++ + +D HN
Sbjct: 128 NKLHEDSLEVKRTIGDLESDY-KMSMDEKDNAHN 160
>SB_7592| Best HMM Match : PI-PLC-Y (HMM E-Value=1.1e-33)
Length = 997
Score = 33.5 bits (73), Expect = 0.19
Identities = 17/55 (30%), Positives = 29/55 (52%)
Frame = +3
Query: 258 IRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKE 422
++ G+ LLE + QE+LN+ L KL E A A + E+ + + I + L +
Sbjct: 391 LKHGQVLLEAAAESQEQLNEWLVKLQEAAATAPEEKEVLRKQQSMKQNIAQELSD 445
>SB_2296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 185
Score = 33.1 bits (72), Expect = 0.25
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = -3
Query: 489 GQPARPSWLGSLACATRSLDH*TLSKSCKSHLQLSTWLS 373
G P RPSW+ + A R D TL ++CK+ +W+S
Sbjct: 107 GLPGRPSWITVIRYAPRYRDTLTLIRTCKTCSWPKSWIS 145
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 32.7 bits (71), Expect = 0.33
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 234 HPSQFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKT 413
H + R +DL E+ +EE+N+ A++ L+++ ++ TK ANE+ T
Sbjct: 222 HEEEVRRMKEERKDLCEEIKALREEVNEFKARVSHLKSEERSLDRRTKELTNNANELEFT 281
Query: 414 LKE 422
L+E
Sbjct: 282 LRE 284
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 32.7 bits (71), Expect = 0.33
Identities = 21/78 (26%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = +3
Query: 273 DLLEQGHDRQEELNDLLAKLD----ELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVT 440
DL+ H++ E+ND KLD +L + +V K + A + ++K D +
Sbjct: 1639 DLVNSLHEKMSEMNDEKDKLDDENKQLLDEKSREVTDLKGEVKKAQDDADSVKRLVDAII 1698
Query: 441 ESHKQAIQATMDVPAVQE 494
E + Q+ D+ A+QE
Sbjct: 1699 EENDTLKQSEHDLLAIQE 1716
>SB_32575| Best HMM Match : SNF7 (HMM E-Value=1.1)
Length = 579
Score = 31.5 bits (68), Expect = 0.76
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 178 RTIDEKSAELDRLIAENEDTLHNLEEA*GAVGTCWNKV 291
+ + +KS ELD+ I E D + LE+ A+ T WN++
Sbjct: 129 KAVTDKSKELDKKIQEGLDEKNALEKLGDALQTTWNEI 166
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = +3
Query: 312 NDLL-AKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDVPAV 488
N+LL A+LD+L+ Q K+ +N + + +K+ D+ ESHK+A ++
Sbjct: 3055 NELLHAQLDDLRKQITGYQGNIKSLEENSNRLQERIKDLEDENLESHKKASSLECELSTA 3114
Query: 489 QEKV 500
E +
Sbjct: 3115 NENL 3118
>SB_38795| Best HMM Match : M (HMM E-Value=2.4e-07)
Length = 1447
Score = 31.1 bits (67), Expect = 1.00
Identities = 18/82 (21%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 258 IRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQV 437
I++ L Q + + L D +++L +KN++ KA L AN+ L++ +
Sbjct: 639 IQQVESLTVQLAESERMLRDKEEDMEDLDKNSKNEINSLKAKLAKANDELSDLRDELSET 698
Query: 438 TESHKQAIQ-ATMDVPAVQEKV 500
+ +++ +Q A + +EK+
Sbjct: 699 KQGYEKVMQKAKQEASLFKEKL 720
>SB_40567| Best HMM Match : Beta-lactamase (HMM E-Value=9.7e-28)
Length = 1006
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 21/28 (75%)
Frame = +3
Query: 327 KLDELQAQAKNDVELTKATLTAANEIYK 410
KL+EL + +N+VEL KAT +A+ +Y+
Sbjct: 692 KLEELTSFVQNEVELGKATAVSASLVYR 719
>SB_19932| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2201
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/83 (26%), Positives = 45/83 (54%)
Frame = +1
Query: 124 LLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*GAVGTCWNKVTTGR 303
LLP+ L+K H E+N T D S+++ A+N H +E + +++T+ +
Sbjct: 1230 LLPNSSLSKSHYMERELNSTFD-ASSQMTTKAAQNLSKAHYMERELDSTFDDSSQMTS-K 1287
Query: 304 RSSTISSLSWMSCRRKLKTTWNS 372
+S++S +M R+L +T+++
Sbjct: 1288 AASSLSKSHYM--ERELNSTFDA 1308
>SB_15709| Best HMM Match : CAP_GLY (HMM E-Value=0)
Length = 729
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Frame = +3
Query: 279 LEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTES-HKQ 455
L++ R EL LA + + D+E TKA L + E + LK+ +++TE+ HK+
Sbjct: 597 LQEKQSRISELEQELASNQLSYEELQTDLEFTKAELQSTVEDNEALKKQVEELTETIHKK 656
>SB_18951| Best HMM Match : EGF (HMM E-Value=2.1e-06)
Length = 1223
Score = 29.9 bits (64), Expect = 2.3
Identities = 23/76 (30%), Positives = 35/76 (46%)
Frame = +3
Query: 270 RDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESH 449
R+L E+ + EL + A+L+ELQ Q A E L+E VTE
Sbjct: 187 RELAEKHESQLNELREQRARLEELQQQLS-------AEQAKQREQQLLLEEKQKTVTEEQ 239
Query: 450 KQAIQATMDVPAVQEK 497
++ IQA +D ++K
Sbjct: 240 QKLIQAQIDEQRERQK 255
>SB_54674| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1149
Score = 29.9 bits (64), Expect = 2.3
Identities = 24/84 (28%), Positives = 37/84 (44%), Gaps = 5/84 (5%)
Frame = +1
Query: 13 AASGKLNSMTELADQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSME-----MN 177
AA GKL S++E + L+R +E L Y + N L D+K + + E N
Sbjct: 543 AAGGKLKSVSEEEQKRLEREIREQEELLKGYQQENERLYRDLKQQQASSKATEGRMFSEN 602
Query: 178 RTIDEKSAELDRLIAENEDTLHNL 249
+ + S E + L ED + L
Sbjct: 603 QKLGATSQEREDLKLRYEDEIDRL 626
>SB_25455| Best HMM Match : DUF948 (HMM E-Value=0.11)
Length = 260
Score = 29.9 bits (64), Expect = 2.3
Identities = 21/65 (32%), Positives = 28/65 (43%)
Frame = +3
Query: 252 GGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSD 431
GGIR L QG+ + LN LLA LD L + T A T N +++
Sbjct: 143 GGIRDEIRKL-QGNISDDGLNTLLAALDSLAVRVDFTTNTTNALFTQLNTTDAAIRDTLS 201
Query: 432 QVTES 446
Q+ S
Sbjct: 202 QINSS 206
>SB_1296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 954
Score = 29.9 bits (64), Expect = 2.3
Identities = 15/76 (19%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Frame = +1
Query: 1 NELNAASGKLNSMTELADQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMN- 177
+++N +N + L +L++ +G + V+ +LPD+K++ ++++
Sbjct: 663 SDVNQNPDSINDYSTLNGSSLRKTGESSTSDVGTHGHVSDNMLPDVKISDERSPDVKLSD 722
Query: 178 -RTIDEKSAELDRLIA 222
R+ D K + D ++A
Sbjct: 723 ERSPDVKVSVFDEMLA 738
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 25/51 (49%)
Frame = +1
Query: 100 LYAEVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLE 252
L A+++ +IKLNKL D M I E DR+ ENE + +E
Sbjct: 1408 LKADIDELKAENIKLNKLIND---MEAGIKRTQTESDRIAFENESNVKKIE 1455
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.5 bits (63), Expect = 3.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +3
Query: 294 DRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 434
+R+E+ LA D+ +N++ K L A E KTL E SD+
Sbjct: 1571 EREEQFKAELADKDDCIQATENELNQVKHQLQLAQEAKKTLLEASDE 1617
>SB_26603| Best HMM Match : SNF (HMM E-Value=0)
Length = 518
Score = 29.5 bits (63), Expect = 3.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 67 RARAVYDEALGLYAEVNTTLLPDIK 141
+A YDE + LY VN TLLP+ K
Sbjct: 218 QANRSYDECIALYGGVNGTLLPENK 242
>SB_17575| Best HMM Match : CBM_19 (HMM E-Value=9.6)
Length = 139
Score = 29.5 bits (63), Expect = 3.0
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Frame = +2
Query: 599 RNMPIKLLRPPTKSR-RKRPLPKAKTVNFERRVQTKLDYSCSKVREKTVSK 748
R P + L PTK + RK P P + V + Q K Y C+++ E T K
Sbjct: 36 RPCPTQELVEPTKGKQRKYPCPTHELVEPTKGKQRKYPYPCNELVEPTKGK 86
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 RKRNMPIKLLRPPTKSR-RKRPLPKAKTVNFERRVQTKLDYSCSKVREKT 739
RK P L PTK + RK P P + V + Q K Y C ++ E T
Sbjct: 88 RKYPCPTHELVEPTKGKQRKYPCPTHELVEPTKGKQRKYPYPCHELVEPT 137
>SB_27628| Best HMM Match : His_kinase (HMM E-Value=3.7)
Length = 99
Score = 29.1 bits (62), Expect = 4.0
Identities = 15/70 (21%), Positives = 31/70 (44%)
Frame = +3
Query: 243 QFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKE 422
+F G R DL++Q +DR L + L L ++A N ++ ++ +
Sbjct: 1 RFNGSFGRLDDLIKQVYDRFANLTSAIDSLKPLASRAGNHSKVLSDQAKQLEDLLRNTSR 60
Query: 423 FSDQVTESHK 452
F+D+ + +
Sbjct: 61 FADKALNASR 70
>SB_11868| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 500
Score = 29.1 bits (62), Expect = 4.0
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +3
Query: 246 FRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAK 356
F +++G DLL G + +L+++ +LDEL+ + K
Sbjct: 222 FGKSLKKGGDLLFPGASYKRKLDEVAGRLDELEREVK 258
>SB_978| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1045
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/55 (32%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +2
Query: 593 RKRNMPIKLLRPPTKSR---RKRPLPKAKTVNFERRVQTKLDYSCSKVREKTVSK 748
RKR M PP+K R R L A + +K+D CSK K S+
Sbjct: 431 RKRRMCANRCFPPSKRHKTLRNRTLKVANLQVISKHTSSKIDNQCSKASSKCFSR 485
>SB_53466| Best HMM Match : SCP (HMM E-Value=2.4e-27)
Length = 5087
Score = 29.1 bits (62), Expect = 4.0
Identities = 23/103 (22%), Positives = 45/103 (43%), Gaps = 2/103 (1%)
Frame = +1
Query: 112 VNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*GAVGTCWNKV 291
V T I++ KL E+ ++ + ++ E D+L+ E LH + E V +
Sbjct: 4371 VEATQQAAIEIEKLCEEKQKLAEHLQNQARENDKLVREEGQYLHRIHELEITVNRLEEEA 4430
Query: 292 TTGRRSSTISSLSW--MSCRRKLKTTWNSRKPR*QLQMRFTRL 414
T R+S + S+ + R LK + +++ RF ++
Sbjct: 4431 TD--RASLLDSIQGDKETISRALKQNKELKTQLEEIEKRFVKM 4471
>SB_31943| Best HMM Match : ResIII (HMM E-Value=1.6)
Length = 1053
Score = 29.1 bits (62), Expect = 4.0
Identities = 18/54 (33%), Positives = 26/54 (48%)
Frame = +3
Query: 267 GRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFS 428
G LL QG+ + + +LD+ Q K DV LT ++ TA T K+ S
Sbjct: 857 GTQLLLQGYAKSHPQCFSIDRLDDSQGHYKWDVRLTSSSFTAMYTSVPTSKDTS 910
>SB_14528| Best HMM Match : CXCXC (HMM E-Value=8.1)
Length = 310
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/28 (46%), Positives = 16/28 (57%)
Frame = -1
Query: 659 AADAFFLISWAASEALSAYSFCALCAKS 576
AA F+LISW A+ A S Y AL +
Sbjct: 116 AASRFYLISWVATNAASRYYLYALATNA 143
>SB_34876| Best HMM Match : TehB (HMM E-Value=5.4)
Length = 172
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 279 LEQGHDRQEELNDLLAKLDELQ---AQAKNDVELTKATL 386
L++ HD++EELN+ + +LD L+ Q + D+E T+
Sbjct: 24 LKRVHDKKEELNNQMKQLDALENSLLQQRKDLEYMDETI 62
>SB_28981| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 655
Score = 28.7 bits (61), Expect = 5.3
Identities = 11/37 (29%), Positives = 22/37 (59%)
Frame = +1
Query: 145 NKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEE 255
+K+ E+ ++ T++EK D+++ E L NLE+
Sbjct: 295 DKMLEEELKKRETLEEKQKLQDKILEEERKRLENLEK 331
>SB_26703| Best HMM Match : TehB (HMM E-Value=5.4)
Length = 168
Score = 28.7 bits (61), Expect = 5.3
Identities = 14/39 (35%), Positives = 25/39 (64%), Gaps = 3/39 (7%)
Frame = +3
Query: 279 LEQGHDRQEELNDLLAKLDELQ---AQAKNDVELTKATL 386
L++ HD++EELN+ + +LD L+ Q + D+E T+
Sbjct: 20 LKRVHDKKEELNNQMKQLDALENSLLQQRKDLEYMDETI 58
>SB_51107| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Frame = +3
Query: 297 RQEELNDLLAKLDELQAQAKNDVEL---TKATLTAANEIYKTLKEFSDQVTESHKQ 455
R++ L+D L L + K+ ++L L NE+ LKEF++ +T+ K+
Sbjct: 58 REQVLSDDSVLLSSLYLREKDVLQLQFLASGKLDEMNELISNLKEFAEAITDDSKR 113
>SB_20622| Best HMM Match : zf-CHC2 (HMM E-Value=0.64)
Length = 276
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/33 (33%), Positives = 22/33 (66%)
Frame = +3
Query: 258 IRRGRDLLEQGHDRQEELNDLLAKLDELQAQAK 356
+++G DLL G + +L+++ +LDEL+ + K
Sbjct: 2 LKKGGDLLFPGASYKRKLDEVAGRLDELEREVK 34
>SB_49946| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 139
Score = 28.3 bits (60), Expect = 7.0
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +3
Query: 357 NDVELTKATLTAANEIYKTLKEFSDQVTESHKQAI 461
N + + L NE Y+ L+E DQ+ +H+Q +
Sbjct: 97 NSCPVCRHELPTDNEAYEELRELKDQLQNTHQQKV 131
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 28.3 bits (60), Expect = 7.0
Identities = 16/67 (23%), Positives = 32/67 (47%), Gaps = 1/67 (1%)
Frame = +3
Query: 279 LEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATL-TAANEIYKTLKEFSDQVTESHKQ 455
LE+ H + E ++A+ E + + + E + L T NE+ + L + ++TE +
Sbjct: 909 LEKKHSQISEEKAIVAEQLESEREVAQETEEMRQRLQTKKNELEELLSDLEGRITEEEEN 968
Query: 456 AIQATMD 476
+ T D
Sbjct: 969 VLALTED 975
>SB_51222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2520
Score = 27.9 bits (59), Expect = 9.3
Identities = 23/81 (28%), Positives = 38/81 (46%)
Frame = +3
Query: 258 IRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQV 437
I R + L++ ++ +EL LA EL K V+ ++T +E +KE Q
Sbjct: 819 IERKDNALKEFQEKNKELECQLAATGEL----KKTVDELSNSITLRDEKITKIKEQLKQT 874
Query: 438 TESHKQAIQATMDVPAVQEKV 500
E K+ +A + A +EKV
Sbjct: 875 LEKFKEKEKALKEEIAEKEKV 895
>SB_34592| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 73
Score = 27.9 bits (59), Expect = 9.3
Identities = 18/50 (36%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +2
Query: 593 RKRNMPIKLLRPPTKSR-RKRPLPKAKTVNFERRVQTKLDYSCSKVREKT 739
RK P L PTK + RK P P + V + Q K Y C ++ E T
Sbjct: 22 RKYPYPCHELVEPTKGKQRKYPCPTHELVEPTKGKQRKYPYPCHELVEPT 71
>SB_28982| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1287
Score = 27.9 bits (59), Expect = 9.3
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 262 GAVGTCWNKVTTGRRSSTISSLSWMSCRRKLKT 360
G+V W VT+ RRSS+ SS ++ + RR LKT
Sbjct: 352 GSVAMFW--VTSYRRSSSPSSKNFSNVRRPLKT 382
>SB_21400| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1531
Score = 27.9 bits (59), Expect = 9.3
Identities = 14/62 (22%), Positives = 33/62 (53%)
Frame = +3
Query: 270 RDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESH 449
R+L ++ ++ +E+N L ++DE ++ ++ + L + + T E KE Q+ +
Sbjct: 507 RELKDELRNKDDEINTLKEQMDEKNSEVRDALALVERSKTLQGE---QCKELDTQIEQLQ 563
Query: 450 KQ 455
K+
Sbjct: 564 KK 565
>SB_21297| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 262
Score = 27.9 bits (59), Expect = 9.3
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Frame = +1
Query: 46 LADQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLH-EDSMEMNRTIDEKSAELDRLIA 222
+AD+ K V D+ L E+N + P+ +L + ++ ++ T D++ E+ +L A
Sbjct: 1 MADEVAKSTEPVKDDDLDDLLEINNAIRPNFQLVSVSPQEPTPLSSTNDDQE-EMGKLFA 59
Query: 223 EN-EDTLHNLEEA*GAVG 273
++ + +LE+A +G
Sbjct: 60 QSFAEAAADLEKAMKTMG 77
>SB_41077| Best HMM Match : LRR_1 (HMM E-Value=1.8e-05)
Length = 1200
Score = 27.9 bits (59), Expect = 9.3
Identities = 20/77 (25%), Positives = 37/77 (48%)
Frame = +3
Query: 243 QFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKE 422
QF G+ + R+ E+ H R + L + L DE +KN + LT + IY+ +
Sbjct: 726 QFVAGLLQWREDKEERHARLQNLIEELINKDE--GTSKNG-----SFLTLSCSIYEAKEM 778
Query: 423 FSDQVTESHKQAIQATM 473
++ E+H++ I +
Sbjct: 779 VKEEALENHRERISTAL 795
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,137,463
Number of Sequences: 59808
Number of extensions: 326611
Number of successful extensions: 1585
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2034222073
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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