Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30812
(749 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75533-2|CAA99816.1| 245|Caenorhabditis elegans Hypothetical pr... 33 0.29
Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical p... 31 1.2
Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical pr... 31 1.2
U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical pr... 31 1.2
J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy ch... 31 1.2
AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical... 31 1.2
U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical pr... 30 1.5
U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical pr... 30 1.5
U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical p... 30 1.5
U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical p... 30 1.5
U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical p... 30 1.5
U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical p... 30 1.5
U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical pr... 29 2.7
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 29 2.7
AL137227-8|CAB70242.1| 258|Caenorhabditis elegans Hypothetical ... 29 2.7
U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical pr... 29 3.5
AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical ... 29 4.7
Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical p... 28 6.2
Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical pr... 28 6.2
Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical pr... 28 6.2
AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical ... 28 6.2
Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 8.1
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 8.1
U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical pr... 28 8.1
AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein... 28 8.1
AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans hom... 28 8.1
>Z75533-2|CAA99816.1| 245|Caenorhabditis elegans Hypothetical
protein C54G4.3 protein.
Length = 245
Score = 32.7 bits (71), Expect = 0.29
Identities = 19/70 (27%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Frame = +1
Query: 52 DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTI--DEKSAELDRLIAE 225
+Q +++A+A D+AL V L + K+N L E +++N++ EK +++ L+ +
Sbjct: 67 NQKMEKAKATADQALASTLMVKDVQLLEKKVNILKESVVQVNKSFYKYEKDVDMNDLMDQ 126
Query: 226 NEDTLHNLEE 255
D +H E+
Sbjct: 127 VIDMVHRTEK 136
>Z83107-10|CAB05505.1| 1963|Caenorhabditis elegans Hypothetical
protein F11C3.3 protein.
Length = 1963
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 234 HPSQFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATL----TAANE 401
H +Q G ++ D + + D+ ++LN AK+++ +AQA D E A L +
Sbjct: 1194 HENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLN 1253
Query: 402 IYKTLKEFSDQVTESHKQA 458
K K+F Q+TE +A
Sbjct: 1254 NEKLAKQFELQLTELQSKA 1272
>Z81499-3|CAB04089.1| 1963|Caenorhabditis elegans Hypothetical protein
F11C3.3 protein.
Length = 1963
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 234 HPSQFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATL----TAANE 401
H +Q G ++ D + + D+ ++LN AK+++ +AQA D E A L +
Sbjct: 1194 HENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLN 1253
Query: 402 IYKTLKEFSDQVTESHKQA 458
K K+F Q+TE +A
Sbjct: 1254 NEKLAKQFELQLTELQSKA 1272
>U23452-3|AAU87818.1| 1982|Caenorhabditis elegans Hypothetical protein
R07G3.3a protein.
Length = 1982
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 303 EELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQ 464
EE L A+L ++Q + K D+E ++ L+A+NE K SDQ K+ I+
Sbjct: 1227 EEKTKLQAQLHQIQKE-KADLENQRSRLSASNEEQKLKIASSDQEANQRKREIE 1279
>U23452-2|AAU87819.1| 1987|Caenorhabditis elegans Hypothetical protein
R07G3.3b protein.
Length = 1987
Score = 30.7 bits (66), Expect = 1.2
Identities = 19/54 (35%), Positives = 30/54 (55%)
Frame = +3
Query: 303 EELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQ 464
EE L A+L ++Q + K D+E ++ L+A+NE K SDQ K+ I+
Sbjct: 1227 EEKTKLQAQLHQIQKE-KADLENQRSRLSASNEEQKLKIASSDQEANQRKREIE 1279
>J01050-1|AAA28124.1| 1966|Caenorhabditis elegans myosin heavy chain
protein.
Length = 1966
Score = 30.7 bits (66), Expect = 1.2
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Frame = +3
Query: 234 HPSQFRGGIRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATL----TAANE 401
H +Q G ++ D + + D+ ++LN AK+++ +AQA D E A L +
Sbjct: 1197 HENQLGGLRKKHTDAVAELTDQLDQLNKAKAKVEKDKAQAVRDAEDLAAQLDQETSGKLN 1256
Query: 402 IYKTLKEFSDQVTESHKQA 458
K K+F Q+TE +A
Sbjct: 1257 NEKLAKQFELQLTELQSKA 1275
>AF047655-10|AAC04396.1| 335|Caenorhabditis elegans Hypothetical
protein C17B7.2 protein.
Length = 335
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 300 QEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLK 419
++ L D LAK+DE+ A+ KND+ + T +TL+
Sbjct: 176 KDNLKDFLAKIDEVDAKNKNDLNKFDKSCTQFTPCLRTLQ 215
>U80955-9|AAN65296.1| 863|Caenorhabditis elegans Hypothetical
protein T04C9.1b protein.
Length = 863
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 291 HDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEF 425
HD + L+D + ++ Q K + TK TA KTL EF
Sbjct: 23 HDHEVALDDAFKNIKLIENQCKELIACTKKLSTAQRAFAKTLSEF 67
>U80955-8|AAN65295.1| 881|Caenorhabditis elegans Hypothetical
protein T04C9.1a protein.
Length = 881
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/45 (33%), Positives = 21/45 (46%)
Frame = +3
Query: 291 HDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEF 425
HD + L+D + ++ Q K + TK TA KTL EF
Sbjct: 23 HDHEVALDDAFKNIKLIENQCKELIACTKKLSTAQRAFAKTLSEF 67
>U29381-14|ABI54346.1| 1840|Caenorhabditis elegans Hypothetical
protein F35D11.11a protein.
Length = 1840
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 225 ERRHPSQFRGGIRRGRDLLEQGHDRQ---EELNDLLAKLDELQAQAKNDVELTKATLTAA 395
E+R +R ++ HD + +EL K+ L+ Q ++ +LT + +
Sbjct: 379 EKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSL 438
Query: 396 NEIYKTLKEFSDQVTESHKQAIQATMD 476
NE ++ K+F +++ H++ ++ D
Sbjct: 439 NEAHRQHKQFIEELMIRHREELKERED 465
>U29381-13|ABI54348.1| 1898|Caenorhabditis elegans Hypothetical
protein F35D11.11c protein.
Length = 1898
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 225 ERRHPSQFRGGIRRGRDLLEQGHDRQ---EELNDLLAKLDELQAQAKNDVELTKATLTAA 395
E+R +R ++ HD + +EL K+ L+ Q ++ +LT + +
Sbjct: 379 EKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSL 438
Query: 396 NEIYKTLKEFSDQVTESHKQAIQATMD 476
NE ++ K+F +++ H++ ++ D
Sbjct: 439 NEAHRQHKQFIEELMIRHREELKERED 465
>U29381-12|AAM98022.3| 1671|Caenorhabditis elegans Hypothetical
protein F35D11.11d protein.
Length = 1671
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 225 ERRHPSQFRGGIRRGRDLLEQGHDRQ---EELNDLLAKLDELQAQAKNDVELTKATLTAA 395
E+R +R ++ HD + +EL K+ L+ Q ++ +LT + +
Sbjct: 139 EKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSL 198
Query: 396 NEIYKTLKEFSDQVTESHKQAIQATMD 476
NE ++ K+F +++ H++ ++ D
Sbjct: 199 NEAHRQHKQFIEELMIRHREELKERED 225
>U29381-11|ABI54347.1| 1911|Caenorhabditis elegans Hypothetical
protein F35D11.11b protein.
Length = 1911
Score = 30.3 bits (65), Expect = 1.5
Identities = 18/87 (20%), Positives = 41/87 (47%), Gaps = 3/87 (3%)
Frame = +3
Query: 225 ERRHPSQFRGGIRRGRDLLEQGHDRQ---EELNDLLAKLDELQAQAKNDVELTKATLTAA 395
E+R +R ++ HD + +EL K+ L+ Q ++ +LT + +
Sbjct: 379 EKRRKDDREAERKRSSVYSQREHDLKKLDDELRKASEKIRNLEEQRESQEKLTISVQNSL 438
Query: 396 NEIYKTLKEFSDQVTESHKQAIQATMD 476
NE ++ K+F +++ H++ ++ D
Sbjct: 439 NEAHRQHKQFIEELMIRHREELKERED 465
>U40800-4|AAO91742.1| 763|Caenorhabditis elegans Hypothetical
protein D2096.12 protein.
Length = 763
Score = 29.5 bits (63), Expect = 2.7
Identities = 20/71 (28%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Frame = +3
Query: 258 IRRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTA-ANEIYKTLKEFSDQ 434
+R D + H ++EE LA D + + K D+E+ K+++ +EIY T K Q
Sbjct: 236 LRLQADFQKDVHKKEEEHLRHLAAKDLIIEKQKKDLEMMKSSIACRKSEIYSTPKTTVTQ 295
Query: 435 VTESHKQAIQA 467
+++Q+ A
Sbjct: 296 NFPTNRQSSTA 306
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +1
Query: 145 NKLHEDSMEMNRTIDEKSAELDRLIAE 225
N +++ ME RT+DEK E+ RL E
Sbjct: 227 NSFYQEMMENRRTVDEKEQEMHRLEKE 253
>AL137227-8|CAB70242.1| 258|Caenorhabditis elegans Hypothetical
protein F58D5.7 protein.
Length = 258
Score = 29.5 bits (63), Expect = 2.7
Identities = 17/70 (24%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 52 DQALKRARAVYDEALGLYAEVNTTLLPDIKLNKLHEDSMEMNRTI--DEKSAELDRLIAE 225
++ +++A+A D+AL V L + K+N L + +++N+ EK ++ L+ +
Sbjct: 77 NRKMEKAKATADQALASTLMVKDVQLLEKKVNILKDSVIQVNKAFYKYEKDVDMKDLMDQ 136
Query: 226 NEDTLHNLEE 255
D +H E+
Sbjct: 137 VTDMVHRTEK 146
>U50309-7|AAG24132.1| 1974|Caenorhabditis elegans Hypothetical protein
F58G4.1 protein.
Length = 1974
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/65 (26%), Positives = 34/65 (52%)
Frame = +3
Query: 300 QEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHKQAIQATMDV 479
Q ++ +LLA++ EL+ + + A NE+ L+E D++ E+ A QA +++
Sbjct: 1115 QRQIKELLARIQELEEELDAERNSRSKAEKARNEMQMELEELGDRLDEA-GGATQAQIEL 1173
Query: 480 PAVQE 494
+E
Sbjct: 1174 NKKRE 1178
>AF043693-3|AAB97537.1| 207|Caenorhabditis elegans Hypothetical
protein C34B2.5 protein.
Length = 207
Score = 28.7 bits (61), Expect = 4.7
Identities = 12/34 (35%), Positives = 21/34 (61%)
Frame = +1
Query: 157 EDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA 258
ED ++ ++ ++ ELDR IAE + ++N EA
Sbjct: 113 EDYKQLQESLPKRRVELDRKIAEINEKINNRNEA 146
>Z99771-2|CAB16920.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 315 DLLAKLDELQAQAKNDVELTKATLTAAN-EIYKTLKEFSDQVTESHKQAIQATMDVPAVQ 491
+L K E Q +++ + A AA E+ K ++EF D+V + +A D+ A +
Sbjct: 278 ELTLKKQEAQKTLQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKK 337
Query: 492 EKV 500
KV
Sbjct: 338 RKV 340
>Z66513-16|CAA91339.1| 1130|Caenorhabditis elegans Hypothetical
protein F54D5.14 protein.
Length = 1130
Score = 28.3 bits (60), Expect = 6.2
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 315 DLLAKLDELQAQAKNDVELTKATLTAAN-EIYKTLKEFSDQVTESHKQAIQATMDVPAVQ 491
+L K E Q +++ + A AA E+ K ++EF D+V + +A D+ A +
Sbjct: 278 ELTLKKQEAQKTLQDETKKEYAKNRAARTEVEKKIQEFRDEVEVQDAEIAEAREDLDAKK 337
Query: 492 EKV 500
KV
Sbjct: 338 RKV 340
>Z27081-3|CAH19085.1| 869|Caenorhabditis elegans Hypothetical
protein M01A8.2b protein.
Length = 869
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +3
Query: 261 RRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTK-----ATLTAANEIYKTLKEF 425
R+ ++ EQ + EL DL LDE + + + DVE K AN + K
Sbjct: 502 RKLGNISEQYEKKVSELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTH 561
Query: 426 SDQVTESHKQ 455
Q+ E +K+
Sbjct: 562 ETQIAEKNKE 571
>Z27081-2|CAA81607.2| 937|Caenorhabditis elegans Hypothetical
protein M01A8.2a protein.
Length = 937
Score = 28.3 bits (60), Expect = 6.2
Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 5/70 (7%)
Frame = +3
Query: 261 RRGRDLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTK-----ATLTAANEIYKTLKEF 425
R+ ++ EQ + EL DL LDE + + + DVE K AN + K
Sbjct: 570 RKLGNISEQYEKKVSELGDLKKMLDEARKKFEEDVEQMKNSNQQVIRNHANAVESLQKTH 629
Query: 426 SDQVTESHKQ 455
Q+ E +K+
Sbjct: 630 ETQIAEKNKE 639
>AL031629-2|CAA20975.1| 248|Caenorhabditis elegans Hypothetical
protein Y106G6D.2 protein.
Length = 248
Score = 28.3 bits (60), Expect = 6.2
Identities = 19/69 (27%), Positives = 33/69 (47%)
Frame = +1
Query: 115 NTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*GAVGTCWNKVT 294
N T+ ++ + ++ + R +DE LD+L +EN+ L E WN VT
Sbjct: 107 NNTIHGNVLRFRREYENEDSKRKLDEMKNTLDQLKSENK-AWKILSEDVQCESDLWNLVT 165
Query: 295 TGRRSSTIS 321
R+SS ++
Sbjct: 166 EKRKSSWLT 174
>Z81522-9|CAB61005.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 EALGLYAEVNTTLLPDIKLN-KLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*G 264
E+ G A ++ L I+L+ K + + TID+ + + + EN+ ++ LE+A
Sbjct: 460 ESFGPLAADSSQALRQIELHTKFQQKLNDFQETIDKLESFVAVVDEENDASVATLEDALS 519
Query: 265 AVGTCWNKV 291
AV W V
Sbjct: 520 AVSVRWGHV 528
>Z81508-5|CAB04138.1| 357|Caenorhabditis elegans Hypothetical
protein F20E11.7 protein.
Length = 357
Score = 27.9 bits (59), Expect = 8.1
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = -2
Query: 79 QLWLSLKLGRLVLSYCSVFLKP 14
Q WL LK GRL C+ F+ P
Sbjct: 261 QTWLRLKRGRLPCQTCTAFMDP 282
>Z81063-9|CAB61012.2| 3674|Caenorhabditis elegans Hypothetical
protein F15D3.1a protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 EALGLYAEVNTTLLPDIKLN-KLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*G 264
E+ G A ++ L I+L+ K + + TID+ + + + EN+ ++ LE+A
Sbjct: 460 ESFGPLAADSSQALRQIELHTKFQQKLNDFQETIDKLESFVAVVDEENDASVATLEDALS 519
Query: 265 AVGTCWNKV 291
AV W V
Sbjct: 520 AVSVRWGHV 528
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 10 NAASGKLNSMTELADQALKRARAVYDEALGLYAEVNTTLLPDIKL--NKLHEDSMEMNRT 183
+A ++ S +L ++ALK Y E L A+ + L D N+L+ ++ ++NR+
Sbjct: 1246 HATDSEVRSRQDL-EKALKTIEVQYSE-LQTKADEQSRQLQDFAALKNRLNNENSDLNRS 1303
Query: 184 IDEKSAELDRL 216
++E +L+ L
Sbjct: 1304 LEEMDNQLNSL 1314
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Frame = +1
Query: 10 NAASGKLNSMTELADQALKRARAVYDEALGLYAEVNTTLLPDIKL--NKLHEDSMEMNRT 183
+A ++ S +L ++ALK Y E L A+ + L D N+L+ ++ ++NR+
Sbjct: 1246 HATDSEVRSRQDL-EKALKTIEVQYSE-LQTKADEQSRQLQDFAALKNRLNNENSDLNRS 1303
Query: 184 IDEKSAELDRL 216
++E +L+ L
Sbjct: 1304 LEEMDNQLNSL 1314
>U61954-5|AAK29812.1| 575|Caenorhabditis elegans Hypothetical
protein F41H10.4 protein.
Length = 575
Score = 27.9 bits (59), Expect = 8.1
Identities = 14/40 (35%), Positives = 25/40 (62%)
Frame = +1
Query: 109 EVNTTLLPDIKLNKLHEDSMEMNRTIDEKSAELDRLIAEN 228
E N ++ + K KL +D++E +T+ + +E+D L AEN
Sbjct: 224 ESNNAVMDENK--KLSDDNLEYRKTMLSQKSEIDSLKAEN 261
>AJ012469-1|CAA10033.1| 3674|Caenorhabditis elegans DYS-1 protein
protein.
Length = 3674
Score = 27.9 bits (59), Expect = 8.1
Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Frame = +1
Query: 88 EALGLYAEVNTTLLPDIKLN-KLHEDSMEMNRTIDEKSAELDRLIAENEDTLHNLEEA*G 264
E+ G A ++ L I+L+ K + + TID+ + + + EN+ ++ LE+A
Sbjct: 460 ESFGPLAADSSQALRQIELHTKFQQKLNDFQETIDKLESFVAVVDEENDASVATLEDALS 519
Query: 265 AVGTCWNKV 291
AV W V
Sbjct: 520 AVSVRWGHV 528
>AC025723-8|AAK29942.1| 1273|Caenorhabditis elegans C.elegans
homeobox protein 44,isoform a protein.
Length = 1273
Score = 27.9 bits (59), Expect = 8.1
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 273 DLLEQGHDRQEELNDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQVTESHK 452
D E + E L + + LD L A+ ++ A+L AN+ +K + V+ SH
Sbjct: 362 DSAEANAESIERLGETVETLDRLLAEKNRRLQNENASLRVANDGFKGDEVMKAIVSGSHS 421
Query: 453 QAIQ 464
+ ++
Sbjct: 422 RVVE 425
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,902,702
Number of Sequences: 27780
Number of extensions: 235808
Number of successful extensions: 1283
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1283
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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