Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30812
         (749 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    24   1.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    24   1.3  
DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.              23   3.1  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    22   5.3  
DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chlor...    22   7.1  
X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor pro...    21   9.3  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    21   9.3  

>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 663 LGSGRFLLDFVGGLR 619
           LGSG+++ DFVG  R
Sbjct: 263 LGSGQYISDFVGSCR 277


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/15 (60%), Positives = 12/15 (80%)
 Frame = -3

Query: 663 LGSGRFLLDFVGGLR 619
           LGSG+++ DFVG  R
Sbjct: 301 LGSGQYISDFVGSCR 315


>DQ435338-1|ABD92653.1|  135|Apis mellifera OBP21 protein.
          Length = 135

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = +3

Query: 312 NDLLAKLDELQAQAKNDVELTKATLTAANEIYKTLKEFSDQ 434
           N++   + E  A +  D+ L  + L      YKTLKE  ++
Sbjct: 95  NEVNKLITECSAISDADIHLKSSKLIKCFAKYKTLKEIMNE 135


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/33 (33%), Positives = 17/33 (51%)
 Frame = -1

Query: 497 LLLDSRHVHRGLDRLLVRLGHLITELFQSLVNL 399
           + L  +H H+G    + +  HL  EL Q + NL
Sbjct: 537 VFLGPKHDHQGRPISISKNQHLFVELDQFIQNL 569


>DQ667188-1|ABG75740.1|  383|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 383

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 10/33 (30%), Positives = 16/33 (48%)
 Frame = +3

Query: 315 DLLAKLDELQAQAKNDVELTKATLTAANEIYKT 413
           DL   +DE +   +ND E  ++ +  A   Y T
Sbjct: 316 DLREAIDEFKTPMRNDSERNRSPVRPATVQYDT 348


>X72577-1|CAA51169.1|  283|Apis mellifera Apidaecin precursor
           protein.
          Length = 283

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = +2

Query: 563 KEGQGTWRTGRKRNMPIKLLRPPTKSRRKRPLPKAKTVN 679
           +E +     G  R + I   RPP    R+   P+AK  N
Sbjct: 229 REAEPEAEPGNNRPVYIPQPRPPHPRLRREAKPEAKPGN 267


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/10 (70%), Positives = 9/10 (90%)
 Frame = -2

Query: 97  LKLRHTQLWL 68
           L LRHT++WL
Sbjct: 220 LHLRHTKIWL 229


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,103
Number of Sequences: 438
Number of extensions: 3088
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23510295
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)