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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30811
         (531 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC032797-1|AAH32797.1|  247|Homo sapiens non-SMC element 2, MMS2...    60   5e-09
AK057002-1|BAB71338.1|  247|Homo sapiens protein ( Homo sapiens ...    60   5e-09
Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease...    33   0.83 
EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.               33   0.83 
AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disea...    33   0.83 
AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disea...    33   0.83 
AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disea...    33   0.83 
BC029520-1|AAH29520.1|  384|Homo sapiens WDSUB1 protein protein.       31   2.5  
AK093494-1|BAC04184.1|  476|Homo sapiens protein ( Homo sapiens ...    31   2.5  
AC009307-1|AAX93043.1|  219|Homo sapiens unknown protein.              31   2.5  
CR457150-1|CAG33431.1|  245|Homo sapiens RNF138 protein.               29   7.7  
BT006878-1|AAP35524.1|  245|Homo sapiens STRIN protein protein.        29   7.7  
BC018107-1|AAH18107.1|  245|Homo sapiens ring finger protein 138...    29   7.7  
AF162680-1|AAD46623.2|  245|Homo sapiens HSD-4 protein protein.        29   7.7  

>BC032797-1|AAH32797.1|  247|Homo sapiens non-SMC element 2, MMS21
           homolog (S. cerevisiae) protein.
          Length = 247

 Score = 60.1 bits (139), Expect = 5e-09
 Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLI----RRKHRIRCPVAGCANPESVQENHL 426
           F  PITK+ +  PVKN +CGH YE + I+ +I    +RK +  CP  GC++ + ++++ L
Sbjct: 167 FTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTD-IRKSDL 225

Query: 427 LEDEELR 447
           ++DE LR
Sbjct: 226 IQDEALR 232


>AK057002-1|BAB71338.1|  247|Homo sapiens protein ( Homo sapiens
           cDNA FLJ32440 fis, clone SKMUS2001492. ).
          Length = 247

 Score = 60.1 bits (139), Expect = 5e-09
 Identities = 27/67 (40%), Positives = 44/67 (65%), Gaps = 4/67 (5%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLI----RRKHRIRCPVAGCANPESVQENHL 426
           F  PITK+ +  PVKN +CGH YE + I+ +I    +RK +  CP  GC++ + ++++ L
Sbjct: 167 FTCPITKEEMKKPVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTD-IRKSDL 225

Query: 427 LEDEELR 447
           ++DE LR
Sbjct: 226 IQDEALR 232


>Z93024-4|CAI18792.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 399 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 280
           +G + +WT    LP  EI+NS  FIH+  +  L W  Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305


>EF517278-1|ABR22603.1| 2255|Homo sapiens PKDREJ protein.
          Length = 2255

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 399 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 280
           +G + +WT    LP  EI+NS  FIH+  +  L W  Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305


>AL078611-3|CAI18766.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 399 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 280
           +G + +WT    LP  EI+NS  FIH+  +  L W  Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305


>AL031034-1|CAI18795.1| 2253|Homo sapiens polycystic kidney disease
           (polycystin) and REJ homolog (sperm receptor for egg
           protein.
          Length = 2253

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 399 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 280
           +G + +WT    LP  EI+NS  FIH+  +  L W  Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305


>AF116458-1|AAD18021.1| 2253|Homo sapiens polycystic kidney disease
           and receptor for egg jelly related protein protein.
          Length = 2253

 Score = 32.7 bits (71), Expect = 0.83
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = -1

Query: 399 IGTSRNWTSDSMLPSYEIQNSLSFIHMATHCILHWI*YMF 280
           +G + +WT    LP  EI+NS  FIH+  +  L W  Y+F
Sbjct: 267 VGQAPDWTQPLDLPQLEIRNSPLFIHIPNNS-LQWGVYVF 305


>BC029520-1|AAH29520.1|  384|Homo sapiens WDSUB1 protein protein.
          Length = 384

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 256 QFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESV 411
           +F+ PIT++ + DPV     G+ YE+E + N I +K R   P+     P +V
Sbjct: 315 EFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 364


>AK093494-1|BAC04184.1|  476|Homo sapiens protein ( Homo sapiens
           cDNA FLJ36175 fis, clone TESTI2026453, weakly similar to
           PUTATIVE SERINE/THREONINE-PROTEIN KINASE PKWA (EC
           2.7.1.-). ).
          Length = 476

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 256 QFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESV 411
           +F+ PIT++ + DPV     G+ YE+E + N I +K R   P+     P +V
Sbjct: 407 EFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 456


>AC009307-1|AAX93043.1|  219|Homo sapiens unknown protein.
          Length = 219

 Score = 31.1 bits (67), Expect = 2.5
 Identities = 18/52 (34%), Positives = 29/52 (55%)
 Frame = +1

Query: 256 QFLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPVAGCANPESV 411
           +F+ PIT++ + DPV     G+ YE+E + N I +K R   P+     P +V
Sbjct: 150 EFICPITRELMKDPV-IASDGYSYEKEAMENWISKKKR-TSPMTNLVLPSAV 199


>CR457150-1|CAG33431.1|  245|Homo sapiens RNF138 protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 384
           F  P+ ++ +  PV+ T C HV+ R+  L  + R+    CP+
Sbjct: 16  FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56


>BT006878-1|AAP35524.1|  245|Homo sapiens STRIN protein protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 384
           F  P+ ++ +  PV+ T C HV+ R+  L  + R+    CP+
Sbjct: 16  FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56


>BC018107-1|AAH18107.1|  245|Homo sapiens ring finger protein 138
           protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 384
           F  P+ ++ +  PV+ T C HV+ R+  L  + R+    CP+
Sbjct: 16  FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56


>AF162680-1|AAD46623.2|  245|Homo sapiens HSD-4 protein protein.
          Length = 245

 Score = 29.5 bits (63), Expect = 7.7
 Identities = 13/42 (30%), Positives = 23/42 (54%)
 Frame = +1

Query: 259 FLDPITKKHISDPVKNTMCGHVYERETILNLIRRKHRIRCPV 384
           F  P+ ++ +  PV+ T C HV+ R+  L  + R+    CP+
Sbjct: 16  FYCPVCQEVLKTPVRTTACQHVFCRKCFLTAM-RESGAHCPL 56


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,136,064
Number of Sequences: 237096
Number of extensions: 1447058
Number of successful extensions: 10451
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10337
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10449
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 5160237082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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