Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30810
         (760 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    24   1.5  
EF592538-1|ABQ95984.1|  582|Tribolium castaneum beta-N-acetylglu...    23   3.5  
EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D pro...    23   3.5  
U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           22   6.1  
AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein pr...    22   6.1  
AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory recept...    22   6.1  

>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 23.8 bits (49), Expect = 1.5
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 2/27 (7%)
 Frame = +2

Query: 89  MRAFVV--LACVAMAYGRPEPPVGYSY 163
           MR FV+  +ACV++A  RPE      Y
Sbjct: 1   MRFFVIFFVACVSVALARPEDQYTIKY 27


>EF592538-1|ABQ95984.1|  582|Tribolium castaneum
           beta-N-acetylglucosaminidase NAG3 protein.
          Length = 582

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 6/21 (28%), Positives = 10/21 (47%)
 Frame = -3

Query: 497 WSHSRDTRKSLLNWFWGRYVN 435
           W  ++   K  +  FW +Y N
Sbjct: 378 WQDTKSANKIAMKLFWAQYTN 398


>EF125547-1|ABL73931.1|  255|Tribolium castaneum obstractor D
           protein.
          Length = 255

 Score = 22.6 bits (46), Expect = 3.5
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = +3

Query: 441 VPPPEPVEQRLPRIPAVAPPQKHTRF 518
           +PPP P E     IP   P  K   F
Sbjct: 213 IPPPPPEEDDDSNIPQNNPKNKQHNF 238


>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 7/11 (63%), Positives = 10/11 (90%)
 Frame = +1

Query: 655 NIPNFQAPTSS 687
           N+PNF AP++S
Sbjct: 32  NVPNFAAPSTS 42


>AY293621-1|AAP46162.1|  392|Tribolium castaneum glass protein
           protein.
          Length = 392

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/47 (21%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
 Frame = +1

Query: 559 APINSYSNHKNEEEDTPLYVLVKKPEEASLIINIPNFQA-PTSSPSK 696
           +P N+ +N+K+E ++ P        + A +++++ +    P  SP++
Sbjct: 64  SPCNNTANYKSEAQNQPSSYKQPSSDMADVLLSLKHAVVHPGQSPAE 110


>AM292371-1|CAL23183.2|  350|Tribolium castaneum gustatory receptor
           candidate 50 protein.
          Length = 350

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +2

Query: 17  LIGY*INYHRVS 52
           L+GY INY R+S
Sbjct: 112 LLGYSINYRRIS 123


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,888
Number of Sequences: 336
Number of extensions: 2936
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20338724
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)