Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30807
         (771 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    27   0.13 
AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esteras...    23   2.0  
AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esteras...    23   2.0  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.2  
AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface pro...    21   8.2  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 27.5 bits (58), Expect = 0.13
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +1

Query: 46  KKHILLMSFIGKDNKPAPKLRDIILRSDKWHSVYNEVVESMHK 174
           +K I  ++F  K   P P ++     +  W SV+N V+E M K
Sbjct: 233 RKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLELMPK 275


>AJ850297-1|CAH64517.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 397 ALMKLM*TYWKEFIPHTILWH 459
           AL+ L+  YW E+IP  + ++
Sbjct: 335 ALLALLDDYWNEYIPPILYYN 355


>AJ850295-1|CAH64515.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +1

Query: 397 ALMKLM*TYWKEFIPHTILWH 459
           AL+ L+  YW E+IP  + ++
Sbjct: 335 ALLALLDDYWNEYIPPILYYN 355


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.2
 Identities = 9/29 (31%), Positives = 15/29 (51%)
 Frame = -1

Query: 690 LLEVNFHWSILDFITKNWAATIKQFYFWQ 604
           L+ +   W +  F  +N +  +KQF F Q
Sbjct: 443 LIALKLVWIVALFKNENLSEMVKQFLFTQ 471


>AF322227-1|AAK01654.1|  782|Tribolium castaneum cell surface
           protein chaoptin protein.
          Length = 782

 Score = 21.4 bits (43), Expect = 8.2
 Identities = 9/23 (39%), Positives = 16/23 (69%)
 Frame = -2

Query: 302 KLQPVRVVRLHRLRNIINQHLLS 234
           K+QP+R +++   RNI N ++ S
Sbjct: 560 KMQPLRTLKIGVYRNIKNFNIPS 582


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 185,918
Number of Sequences: 336
Number of extensions: 4365
Number of successful extensions: 11
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20753800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)