BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30807 (771 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284,335... 79 3e-15 01_06_0634 + 30746767-30747012,30747083-30747118,30747554-307478... 33 0.19 04_04_0339 - 24513699-24516827 31 0.77 07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390,516... 31 1.0 03_06_0352 - 33312443-33312652,33312747-33312854,33313224-333133... 31 1.0 03_05_0934 - 28935728-28935859,28936000-28936122,28936172-289362... 30 1.8 01_05_0175 - 18936752-18937621,18938855-18941641 30 1.8 01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791,372... 29 4.1 06_03_0690 + 23545198-23545305,23545437-23547246,23547265-235473... 29 5.4 08_02_1437 - 27096364-27097252,27098931-27099022,27099382-270996... 28 7.2 02_05_0850 + 32209798-32210086,32210779-32212316 28 7.2 07_01_1214 - 11583510-11583653,11585063-11585148,11585234-115853... 28 9.5 06_03_0051 - 16023915-16023944,16024025-16024680,16024808-16025300 28 9.5 >07_01_0444 + 3357048-3357425,3357841-3357969,3358165-3358284, 3358661-3358753,3358935-3359014,3359180-3359293, 3359530-3359603,3359757-3359833,3360558-3360641, 3360732-3360824,3360901-3361008,3361130-3361204, 3361507-3361911 Length = 609 Score = 79.4 bits (187), Expect = 3e-15 Identities = 40/117 (34%), Positives = 63/117 (53%) Frame = +1 Query: 1 RLQKIGLNCPDMICLKKHILLMSFIGKDNKPAPKLRDIILRSDKWHSVYNEVVESMHKMY 180 R+ G+ CP + L+ H+L+M FIGK AP+L+D L DK Y E++ +M +Y Sbjct: 305 RVGAAGIRCPKPLLLRLHVLVMEFIGKGGWAAPRLKDAALSDDKLRESYFELITTMRTLY 364 Query: 181 NVGHLIHADLSEYNILWWDNKCWFMMFLSLCNLTTLTGWSFYFEIVVILSISLKKRG 351 L+H DLSEYNIL+++ + + +L + F E + ++ KKRG Sbjct: 365 QKCKLVHGDLSEYNILYFEGHLYIIDVSQSVDLDHPSALEFLKEDCLHVTDFFKKRG 421 Score = 55.6 bits (128), Expect = 4e-08 Identities = 26/57 (45%), Positives = 37/57 (64%) Frame = +3 Query: 243 MLVYDVSQSVQPDHPNGLEFLLRDCRNIVNFFEKKGVSHVQTAEELFKSITGFNEVD 413 + + DVSQSV DHP+ LEFL DC ++ +FF+K+GV+ V + ELF + N D Sbjct: 386 LYIIDVSQSVDLDHPSALEFLKEDCLHVTDFFKKRGVA-VMSVTELFNFVIDQNIAD 441 >01_06_0634 + 30746767-30747012,30747083-30747118,30747554-30747850, 30748482-30748544,30748643-30748696,30748837-30748854, 30749554-30749625,30749731-30749787,30750160-30750236, 30751013-30751094,30751585-30751701,30752083-30752210, 30753074-30753143,30753725-30753765,30753963-30753990, 30754151-30754210 Length = 481 Score = 33.5 bits (73), Expect = 0.19 Identities = 14/43 (32%), Positives = 24/43 (55%) Frame = +1 Query: 115 ILRSDKWHSVYNEVVESMHKMYNVGHLIHADLSEYNILWWDNK 243 I+ +DKW +Y + E + +YN G+ + +E NI W+ K Sbjct: 307 IVGADKWSLLYESIPEKLQILYNDGYKLVIFTNESNIERWNKK 349 >04_04_0339 - 24513699-24516827 Length = 1042 Score = 31.5 bits (68), Expect = 0.77 Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 2/56 (3%) Frame = -3 Query: 427 SNKFTSTSLKPVIDLKSSSAVCTCETPFFSKKLTILRQSRSK-NSNPLGWSG-CTD 266 +++ T + L+P++ LK S +C E F ++ Q +++ S L W+G CTD Sbjct: 716 NHEHTISELRPLVSLKELS-ICNMENASFDDARNVILQKKNRLVSLALSWTGSCTD 770 >07_01_0684 - 5161218-5161427,5161509-5161616,5162217-5162390, 5162515-5162643,5162722-5163009,5163114-5163346, 5164235-5165060 Length = 655 Score = 31.1 bits (67), Expect = 1.0 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%) Frame = +1 Query: 118 LRSDKWHSVYNEVVESMHKMY--NVGHLIHADLSEYNILWWDNK 243 LRS KW Y E E + Y G++I AD++ Y + +DN+ Sbjct: 540 LRSGKWAVTYEEWPEEAYPNYANGPGYVISADIARYIVSEFDNQ 583 >03_06_0352 - 33312443-33312652,33312747-33312854,33313224-33313397, 33313489-33313695,33313700-33313987,33314087-33314319, 33314450-33315263 Length = 677 Score = 31.1 bits (67), Expect = 1.0 Identities = 15/44 (34%), Positives = 26/44 (59%), Gaps = 2/44 (4%) Frame = +1 Query: 118 LRSDKWHSVYNEVVESMHKMY--NVGHLIHADLSEYNILWWDNK 243 LRS KW Y E E ++ Y G++I +D+++Y + +DN+ Sbjct: 562 LRSGKWSVSYEEWQEEVYPPYANGPGYVISSDIAQYIVSEFDNQ 605 >03_05_0934 - 28935728-28935859,28936000-28936122,28936172-28936284, 28936363-28936430,28936517-28936600,28936937-28936980, 28937061-28937204,28937518-28937582,28937722-28937814, 28938132-28938262,28938375-28938394,28938904-28938987, 28939157-28939330,28940106-28940195,28940293-28940364, 28941318-28941365,28941458-28941570,28942786-28942849, 28942943-28943016,28943162-28943201 Length = 591 Score = 30.3 bits (65), Expect = 1.8 Identities = 13/27 (48%), Positives = 20/27 (74%) Frame = -2 Query: 302 KLQPVRVVRLHRLRNIINQHLLSHQRM 222 +LQP+ VV H L+ I++QHL+S R+ Sbjct: 235 ELQPIDVVVEHVLKQILSQHLVSQGRL 261 >01_05_0175 - 18936752-18937621,18938855-18941641 Length = 1218 Score = 30.3 bits (65), Expect = 1.8 Identities = 14/33 (42%), Positives = 22/33 (66%) Frame = +1 Query: 148 NEVVESMHKMYNVGHLIHADLSEYNILWWDNKC 246 N + E++ ++ N H++HADLSEY + D KC Sbjct: 938 NMISENLGRICNA-HVVHADLSEYGAM--DEKC 967 >01_01_0510 - 3723983-3724416,3724895-3725766,3725797-3726791, 3727332-3727439 Length = 802 Score = 29.1 bits (62), Expect = 4.1 Identities = 14/41 (34%), Positives = 23/41 (56%), Gaps = 3/41 (7%) Frame = +1 Query: 238 NKCWFMMFLSLCN---LTTLTGWSFYFEIVVILSISLKKRG 351 ++CW +F ++ N L +TGWS Y EI ++ + K G Sbjct: 212 HRCWEDIFDAISNAQHLIYITGWSVYTEITLVRDSNRPKPG 252 >06_03_0690 + 23545198-23545305,23545437-23547246,23547265-23547348, 23547732-23548048,23549498-23549605,23550038-23550046 Length = 811 Score = 28.7 bits (61), Expect = 5.4 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 3/31 (9%) Frame = +1 Query: 241 KCWFMMFLSLCN---LTTLTGWSFYFEIVVI 324 +CW +F ++ N L LTGWS Y EI +I Sbjct: 215 RCWEDVFDAISNAKHLIYLTGWSVYTEITLI 245 >08_02_1437 - 27096364-27097252,27098931-27099022,27099382-27099654, 27099872-27100819 Length = 733 Score = 28.3 bits (60), Expect = 7.2 Identities = 14/40 (35%), Positives = 22/40 (55%) Frame = -2 Query: 764 PLKSNSQTMIPSSINISTIQRVLESCWKLISIGQSWTSLP 645 PL+ S + S+ NI+ + ++ + KL SWTSLP Sbjct: 362 PLRRTSG--VSSNTNITNLVKIASNSKKLTDASASWTSLP 399 >02_05_0850 + 32209798-32210086,32210779-32212316 Length = 608 Score = 28.3 bits (60), Expect = 7.2 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 1/37 (2%) Frame = +1 Query: 199 HADLSEYNILWWDNKCWFMMFL-SLCNLTTLTGWSFY 306 H + + D K W M+L SLC++ +GWS + Sbjct: 490 HEEYQHFGEKSHDGKAWAEMYLLSLCDVLVTSGWSTF 526 >07_01_1214 - 11583510-11583653,11585063-11585148,11585234-11585316, 11585415-11585572,11587083-11587243,11588058-11588279, 11588553-11588677,11589538-11589656,11589961-11590020, 11590292-11590370,11591936-11592100,11592632-11592660, 11593439-11593500,11594724-11594859,11594999-11595161, 11595245-11595384,11597811-11597899,11598914-11599001, 11599558-11599658,11599711-11599859,11600769-11600870, 11601888-11601973,11602064-11602309 Length = 930 Score = 27.9 bits (59), Expect = 9.5 Identities = 14/31 (45%), Positives = 19/31 (61%) Frame = -2 Query: 674 SIGQSWTSLPKIGQPLSNSFTFGSMIPPFPQ 582 S+ + WTS+ I PLSN ++F M P PQ Sbjct: 828 SLSEIWTSVLNITGPLSN-WSFSDMTLPDPQ 857 >06_03_0051 - 16023915-16023944,16024025-16024680,16024808-16025300 Length = 392 Score = 27.9 bits (59), Expect = 9.5 Identities = 12/43 (27%), Positives = 25/43 (58%) Frame = +3 Query: 351 VSHVQTAEELFKSITGFNEVDVNLLEGVHTTYNSLACRFEIAP 479 V+H+QTA E++ +++ F++ N+ E + +FE+ P Sbjct: 82 VAHLQTAHEIWVALSNFHQGTNNIKELRRDLFKKEYIKFEMKP 124 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 20,413,040 Number of Sequences: 37544 Number of extensions: 412054 Number of successful extensions: 1002 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 966 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1001 length of database: 14,793,348 effective HSP length: 80 effective length of database: 11,789,828 effective search space used: 2075009728 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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