Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30807
         (771 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          24   1.8  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      24   1.8  
AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.           22   5.5  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   7.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   7.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    22   7.3  
DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein pr...    21   9.6  

>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 115 ILRSD-KWHSVYNEVVESMHKMYNV-GHLIHADLSEYN 222
           IL +D KWH++Y+E      K  N+ G++I  +   YN
Sbjct: 343 ILNNDGKWHNIYSE------KGLNILGNIIEGNADSYN 374


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
 Frame = +1

Query: 115 ILRSD-KWHSVYNEVVESMHKMYNV-GHLIHADLSEYN 222
           IL +D KWH++Y+E      K  N+ G++I  +   YN
Sbjct: 343 ILNNDGKWHNIYSE------KGLNILGNIIEGNADSYN 374


>AY545000-1|AAS50159.2|  126|Apis mellifera profilin protein.
          Length = 126

 Score = 22.2 bits (45), Expect = 5.5
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = +3

Query: 372 EELFKSITGFNEVDVNLLEGV 434
           EEL K + GF E D+    GV
Sbjct: 41  EELTKLVQGFEEQDILTSSGV 61


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +3

Query: 24  LSG-YDLLEETYTFNVIYW 77
           LSG YD   + Y F +++W
Sbjct: 766 LSGHYDSSVDVYAFGILFW 784


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 8/19 (42%), Positives = 12/19 (63%), Gaps = 1/19 (5%)
 Frame = +3

Query: 24  LSG-YDLLEETYTFNVIYW 77
           LSG YD   + Y F +++W
Sbjct: 804 LSGHYDSSVDVYAFGILFW 822


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.8 bits (44), Expect = 7.3
 Identities = 10/21 (47%), Positives = 14/21 (66%)
 Frame = -3

Query: 433 TPSNKFTSTSLKPVIDLKSSS 371
           TP+ K T+   KPV  +KSS+
Sbjct: 887 TPAKKATNIGGKPVAVVKSSA 907


>DQ011228-1|AAY63897.1|  486|Apis mellifera Amt-2-like protein
           protein.
          Length = 486

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 5/16 (31%), Positives = 12/16 (75%)
 Frame = -2

Query: 731 SSINISTIQRVLESCW 684
           ++IN+  +Q +++ CW
Sbjct: 78  NNINLILLQNIIDICW 93


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 211,659
Number of Sequences: 438
Number of extensions: 4378
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 24154023
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)