Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30806
(834 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0360 + 22353057-22353691,22354716-22355144,22355233-223553... 129 2e-30
04_04_0141 + 23079516-23079925,23080006-23080084,23080204-230803... 127 1e-29
08_02_0753 - 20805672-20805731,20805825-20805941,20806394-208065... 124 1e-28
11_06_0036 + 19474848-19475188,19475696-19475774,19475880-194760... 118 4e-27
03_05_0881 + 28461857-28462263,28462357-28462435,28462798-284629... 114 7e-26
08_02_1026 + 23743186-23743686,23743793-23743915,23744734-237448... 112 4e-25
11_06_0360 - 22699524-22699529,22699865-22699899,22700650-227007... 80 2e-15
01_01_0767 + 5931031-5931281,5931414-5931594,5932020-5932129,593... 51 1e-06
12_02_0413 - 18803875-18803938,18804009-18804787 32 0.65
02_02_0415 - 9981345-9981440,9981716-9981784,9982035-9982155,998... 29 6.0
08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034 28 8.0
>02_04_0360 +
22353057-22353691,22354716-22355144,22355233-22355311,
22355472-22355594,22356256-22356372,22356636-22356833
Length = 526
Score = 129 bits (312), Expect = 2e-30
Identities = 75/156 (48%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Frame = +1
Query: 256 IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK E G+E + + KEYR K+E EL +IC +L LLD HL+P ++ PESKVFYLKMK
Sbjct: 291 IEQKEESRGNEDRCTLIKEYRGKIETELSKICDGILKLLDSHLVPSSTAPESKVFYLKMK 350
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDYYRYLAE TG R E++ A K A + P P FYYEIL
Sbjct: 351 GDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEIL 410
Query: 610 NSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
NSPD+AC LAK F + +E Y+DSTL
Sbjct: 411 NSPDRACNLAKQAFDEAISELDTL--SEESYKDSTL 444
Score = 84.2 bits (199), Expect = 1e-16
Identities = 43/75 (57%), Positives = 56/75 (74%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 223
S + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 220 SQPAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 279
Query: 224 ARRSSWRVIS*LNRK 268
ARR+SWR+IS + +K
Sbjct: 280 ARRASWRIISSIEQK 294
>04_04_0141 +
23079516-23079925,23080006-23080084,23080204-23080326,
23081655-23081771,23081886-23081945
Length = 262
Score = 127 bits (306), Expect = 1e-29
Identities = 73/156 (46%), Positives = 91/156 (58%), Gaps = 2/156 (1%)
Frame = +1
Query: 256 IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK E G+E + + K+YR K+E EL +IC +L LL+ HL+P ++ PESKVFYLKMK
Sbjct: 73 IEQKEESRGNEDRVTLIKDYRGKIETELTKICDGILKLLESHLVPSSTAPESKVFYLKMK 132
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDYYRYLAE TG R E++ A K A + P P FYYEIL
Sbjct: 133 GDYYRYLAEFKTGAERKDAAENTMVAYKAAQDIALAELPPTHPIRLGLALNFSVFYYEIL 192
Query: 610 NSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
NSPD+AC LAK F + +E Y+DSTL
Sbjct: 193 NSPDRACNLAKQAFDEAISELDTL--SEESYKDSTL 226
Score = 84.6 bits (200), Expect = 9e-17
Identities = 43/75 (57%), Positives = 57/75 (76%), Gaps = 2/75 (2%)
Frame = +2
Query: 50 SSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTET--GVELSNEERNLLSVAYKNVVG 223
S+ + +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+G
Sbjct: 2 SAQAELSREENVYMAKLAEQAERYEEMVEFMEKVAKTVDSEELTVEERNLLSVAYKNVIG 61
Query: 224 ARRSSWRVIS*LNRK 268
ARR+SWR+IS + +K
Sbjct: 62 ARRASWRIISSIEQK 76
>08_02_0753 -
20805672-20805731,20805825-20805941,20806394-20806516,
20806700-20806778,20806867-20807258
Length = 256
Score = 124 bits (298), Expect = 1e-28
Identities = 74/156 (47%), Positives = 87/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 256 IEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK EG +E + KEYR K+E EL +IC +L LLD HL+P ++ ESKVFYLKMK
Sbjct: 67 IEQKEEGRGNEEHVTLIKEYRGKIEAELSKICDGILKLLDSHLVPSSTAAESKVFYLKMK 126
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDY+RYLAE TG R E + A K A +P P FYYEIL
Sbjct: 127 GDYHRYLAEFKTGAERKEAAESTMVAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEIL 186
Query: 610 NSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
NSPDKAC LAK F + E Y+DSTL
Sbjct: 187 NSPDKACNLAKQAFDEAISELDTL--GEESYKDSTL 220
Score = 81.8 bits (193), Expect = 6e-16
Identities = 41/70 (58%), Positives = 55/70 (78%), Gaps = 2/70 (2%)
Frame = +2
Query: 65 VDKEELVQRAKLAEQAERYDDMAAAMKEVTETG--VELSNEERNLLSVAYKNVVGARRSS 238
+ +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GARR+S
Sbjct: 1 MSREENVYMAKLAEQAERYEEMVEYMEKVAKTVDVEELTVEERNLLSVAYKNVIGARRAS 60
Query: 239 WRVIS*LNRK 268
WR++S + +K
Sbjct: 61 WRIVSSIEQK 70
>11_06_0036 +
19474848-19475188,19475696-19475774,19475880-19476002,
19476970-19477086,19477169-19477228
Length = 239
Score = 118 bits (285), Expect = 4e-27
Identities = 65/134 (48%), Positives = 75/134 (55%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 IEQKTEGSERKQQMA--KEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK EG A + YR K+E EL IC +L LLD HL+P A ESKVFYLKMK
Sbjct: 50 IEQKEEGRGNDAHAATIRSYRGKIEAELARICDGILALLDSHLVPSAGAAESKVFYLKMK 109
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDY+RYLAE +G+ R E + A K A +P P FYYEIL
Sbjct: 110 GDYHRYLAEFKSGDERKQAAESTMNAYKAAQDIALADLAPTHPIRLGLALNFSVFYYEIL 169
Query: 610 NSPDKACQLAKTGF 651
NSPD+AC LAK F
Sbjct: 170 NSPDRACNLAKQAF 183
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/36 (72%), Positives = 32/36 (88%)
Frame = +2
Query: 161 GVELSNEERNLLSVAYKNVVGARRSSWRVIS*LNRK 268
G EL+ EERNLLSVAYKNV+GARR+SWR+IS + +K
Sbjct: 18 GEELTVEERNLLSVAYKNVIGARRASWRIISSIEQK 53
>03_05_0881 +
28461857-28462263,28462357-28462435,28462798-28462920,
28463632-28463748,28463861-28463917
Length = 260
Score = 114 bits (275), Expect = 7e-26
Identities = 65/134 (48%), Positives = 77/134 (57%), Gaps = 2/134 (1%)
Frame = +1
Query: 256 IEQKTE--GSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK E G+E KEYR ++E EL +IC +L LLD HL+P A+ ESKVFYLKMK
Sbjct: 72 IEQKEESRGNEAYVASIKEYRSRIETELSKICDGILKLLDSHLVPSATAAESKVFYLKMK 131
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDY+RYLAE +G R E++ A K A P FYYEIL
Sbjct: 132 GDYHRYLAEFKSGAERKEAAENTLVAYKSAQDIALADLPTTHPIRLGLALNFSVFYYEIL 191
Query: 610 NSPDKACQLAKTGF 651
NSPD+AC LAK F
Sbjct: 192 NSPDRACNLAKQAF 205
Score = 82.6 bits (195), Expect = 3e-16
Identities = 43/74 (58%), Positives = 55/74 (74%), Gaps = 2/74 (2%)
Frame = +2
Query: 53 STMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGV--ELSNEERNLLSVAYKNVVGA 226
S +EE V AKLAEQAERY++M M++V +T EL+ EERNLLSVAYKNV+GA
Sbjct: 2 SPAEASREENVYMAKLAEQAERYEEMVEFMEKVAKTTDVGELTVEERNLLSVAYKNVIGA 61
Query: 227 RRSSWRVIS*LNRK 268
RR+SWR+IS + +K
Sbjct: 62 RRASWRIISSIEQK 75
>08_02_1026 +
23743186-23743686,23743793-23743915,23744734-23744850,
23744948-23745001
Length = 264
Score = 112 bits (269), Expect = 4e-25
Identities = 68/156 (43%), Positives = 86/156 (55%), Gaps = 2/156 (1%)
Frame = +1
Query: 256 IEQKTEG--SERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMK 429
IEQK EG + A+ YR +VE EL IC +L LLD+ L+P A+ ++KVFYLKMK
Sbjct: 77 IEQKEEGRGAAGHAAAARSYRARVEAELSNICAGILRLLDERLVPAAAAVDAKVFYLKMK 136
Query: 430 GDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEIL 609
GDY+RYLAE TG R + + A + A ++ SP P FYYEIL
Sbjct: 137 GDYHRYLAEFKTGAERKDAADATLAAYQAAQDIAMKELSPTHPIRLGLALNFSVFYYEIL 196
Query: 610 NSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
NSPD+AC LAK F + E Y+DSTL
Sbjct: 197 NSPDRACTLAKQAFDEAISELDTL--GEESYKDSTL 230
Score = 81.4 bits (192), Expect = 8e-16
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 5/71 (7%)
Frame = +2
Query: 71 KEELVQRAKLAEQAERYDDMAAAMKEVTET-----GVELSNEERNLLSVAYKNVVGARRS 235
+EE+V AKLAEQAERY++M M++V G EL+ EERNLLSVAYKNV+GARR+
Sbjct: 10 REEMVYMAKLAEQAERYEEMVEFMEKVVTAAAAGGGGELTVEERNLLSVAYKNVIGARRA 69
Query: 236 SWRVIS*LNRK 268
SWR++S + +K
Sbjct: 70 SWRIVSSIEQK 80
>11_06_0360 -
22699524-22699529,22699865-22699899,22700650-22700792,
22701165-22701220,22701367-22701454,22702737-22703037,
22704365-22704428
Length = 230
Score = 79.8 bits (188), Expect = 2e-15
Identities = 46/129 (35%), Positives = 68/129 (52%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
+EQK ++ Y+ KVE ELR +C +VL ++ H +P A++ E+ VF+ KMKGD
Sbjct: 66 LEQKVTAGDQPGVTINGYKKKVEDELRAVCNEVLSIIAIHCLPLANSGENVVFFYKMKGD 125
Query: 436 YYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEILNS 615
YYRYLAE +TG + + + S A + W F EI+NS
Sbjct: 126 YYRYLAEFSTGTEKKAATDQSLMAYQ------------------AWPCAQLFSLLEIMNS 167
Query: 616 PDKACQLAK 642
P++A Q+AK
Sbjct: 168 PERASQVAK 176
Score = 77.0 bits (181), Expect = 2e-14
Identities = 35/67 (52%), Positives = 49/67 (73%)
Frame = +2
Query: 68 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 247
++E++V+ AKLAEQAERYDDM MK + V++S EER L SV +K +GARR+SWR+
Sbjct: 3 EREKVVRLAKLAEQAERYDDMVEFMKTLARMDVDMSAEERLLFSVGFKKTIGARRASWRI 62
Query: 248 IS*LNRK 268
+ L +K
Sbjct: 63 LESLEQK 69
>01_01_0767 +
5931031-5931281,5931414-5931594,5932020-5932129,
5932212-5932360,5932686-5932738,5933168-5933260
Length = 278
Score = 50.8 bits (116), Expect = 1e-06
Identities = 32/84 (38%), Positives = 44/84 (52%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
++++T+G E + EYR KVE E+ +IC DV+ ++DK KGD
Sbjct: 46 LKEETKGKESHVRQTAEYRRKVEAEMDKICCDVINIIDK------------------KGD 87
Query: 436 YYRYLAEVATGETRHSVVEDSQKA 507
YYRYLAE TG + V E S A
Sbjct: 88 YYRYLAEFKTGTEKIEVSELSLNA 111
Score = 48.4 bits (110), Expect = 7e-06
Identities = 23/55 (41%), Positives = 34/55 (61%)
Frame = +2
Query: 128 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVIS*LNRKPRVQKENS 292
M AM V + L+ EERNLLSV YKN++GA+R++ R+I + K + + S
Sbjct: 1 MVEAMNSVAKLDEGLTKEERNLLSVGYKNLIGAKRAAMRIIGSIELKEETKGKES 55
Score = 40.3 bits (90), Expect = 0.002
Identities = 22/42 (52%), Positives = 25/42 (59%)
Frame = +1
Query: 592 FYYEILNSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
FY EI+NSPDKACQLAK F +E Y+DSTL
Sbjct: 171 FYCEIMNSPDKACQLAKNAFDEAV--AELPSLSEENYKDSTL 210
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 507 IQDAFEISKAKMQPTHPIRLGLALNFSV 590
+ A + ++ + PT PIRLGLALN SV
Sbjct: 143 VYTASKTAQTDLTPTDPIRLGLALNISV 170
>12_02_0413 - 18803875-18803938,18804009-18804787
Length = 280
Score = 31.9 bits (69), Expect = 0.65
Identities = 20/69 (28%), Positives = 38/69 (55%)
Frame = +1
Query: 325 KELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGETRHSVVEDSQK 504
+++RE+ YD +D H + A S++F + + R LAE+ E + V + SQ+
Sbjct: 59 RQVREVGYDTDDWIDSHPLVAAETKGSRIF---SRNNRRRKLAELIK-ELKDRVEDASQR 114
Query: 505 ASKMLLKSA 531
++ +L+SA
Sbjct: 115 RTRYMLQSA 123
>02_02_0415 -
9981345-9981440,9981716-9981784,9982035-9982155,
9982441-9982622,9983320-9984921
Length = 689
Score = 28.7 bits (61), Expect = 6.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +1
Query: 73 GRTGATCQIGRTS*AI*RHGGRDEGSHGNRRRT*QRGEEPP 195
G GAT Q+G + G G HG R +RGE+ P
Sbjct: 64 GAKGATAQVGVATREAGTAGRHGRGRHGGGARPWRRGEDRP 104
>08_02_0539 + 18338781-18339592,18347885-18349860,18350030-18350034
Length = 930
Score = 28.3 bits (60), Expect = 8.0
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 5/40 (12%)
Frame = +1
Query: 328 ELREICYDVLGLLDKHLIPKASNPES-----KVFYLKMKG 432
+LRE+ YD+ LD+ L+ A+ P S K+ K+KG
Sbjct: 71 DLRELSYDMEDSLDRFLVKSAAEPGSCKKLFKILLTKIKG 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,435,142
Number of Sequences: 37544
Number of extensions: 521371
Number of successful extensions: 1420
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1349
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1403
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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