Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30806
(834 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.) 119 3e-27
SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44) 100 1e-21
SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0) 99 5e-21
SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 1e-18
SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.) 72 5e-13
SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.0
SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4) 29 4.6
SB_3265| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.1
SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.1
SB_12646| Best HMM Match : SSrecog (HMM E-Value=0) 28 8.1
>SB_34219| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 309
Score = 119 bits (287), Expect = 3e-27
Identities = 71/156 (45%), Positives = 88/156 (56%), Gaps = 2/156 (1%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
IEQK EGSERK+Q + YR +E EL E+C VL LL+ LIP A + ESKVFYLKMKGD
Sbjct: 44 IEQKLEGSERKKQNTETYRQTIENELNEVCETVLKLLESKLIPNAQSTESKVFYLKMKGD 103
Query: 436 YYRYLAEVATGETRHSVVEDSQKASKMLLKSARR--KCSPHTP*GWVWR*ISQFFYYEIL 609
YYRY EVA + R VV+ + KA + A + K P P FYYEI+
Sbjct: 104 YYRYEGEVAGADRRREVVQKAMKAYSEAQEIAEKDPKLPPTDPIRLGLALNFSVFYYEIV 163
Query: 610 NSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
+AC LAK F + +E +Y+DSTL
Sbjct: 164 EDSKQACDLAKKAFDDAIAELDTL--SEDQYKDSTL 197
Score = 68.9 bits (161), Expect = 5e-12
Identities = 34/47 (72%), Positives = 37/47 (78%)
Frame = +2
Query: 128 MAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRVIS*LNRK 268
MA AMKE TE L EERNLLSVAYKNVVGA+RSSWRVIS + +K
Sbjct: 1 MAKAMKEATEISETLEQEERNLLSVAYKNVVGAKRSSWRVISSIEQK 47
Score = 37.5 bits (83), Expect = 0.013
Identities = 17/27 (62%), Positives = 20/27 (74%)
Frame = +3
Query: 510 QDAFEISKAKMQPTHPIRLGLALNFSV 590
++A E K+ PT PIRLGLALNFSV
Sbjct: 220 KEAAETGDGKLAPTDPIRLGLALNFSV 246
Score = 28.7 bits (61), Expect = 6.1
Identities = 16/42 (38%), Positives = 25/42 (59%)
Frame = +1
Query: 592 FYYEILNSPDKACQLAKTGFRRLPIRRNWTH*TEIRYQDSTL 717
F+YEI + ++AC+LAK F + + E +Y+DSTL
Sbjct: 247 FHYEIQENQEEACKLAKQAFDDAIAELDSLN--EDQYKDSTL 286
>SB_37955| Best HMM Match : 14-3-3 (HMM E-Value=6.5861e-44)
Length = 251
Score = 100 bits (240), Expect = 1e-21
Identities = 48/74 (64%), Positives = 59/74 (79%)
Frame = +2
Query: 68 DKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSSWRV 247
DKEE V AKLAEQAERYDDM +MKEV + G ELS E+RNLLSVAYKNV+GARR+SWR+
Sbjct: 3 DKEEHVYMAKLAEQAERYDDMVNSMKEVAKMGTELSTEDRNLLSVAYKNVIGARRASWRI 62
Query: 248 IS*LNRKPRVQKEN 289
I+ + +K + E+
Sbjct: 63 ITSIEQKEESKGED 76
Score = 51.6 bits (118), Expect = 8e-07
Identities = 27/60 (45%), Positives = 37/60 (61%), Gaps = 3/60 (5%)
Frame = +1
Query: 256 IEQKTEGSER---KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKM 426
IEQK E K +M + YR +E+EL+ IC ++L LLD LI + + ESKVFY K+
Sbjct: 66 IEQKEESKGEDMAKLEMIRNYRKTIEEELKTICGEILSLLDDSLIKNSQSEESKVFYNKI 125
>SB_36368| Best HMM Match : 14-3-3 (HMM E-Value=0)
Length = 248
Score = 98.7 bits (235), Expect = 5e-21
Identities = 48/74 (64%), Positives = 57/74 (77%)
Frame = +2
Query: 47 PSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGA 226
P+ +EEL+ AK+AEQAERYDDM AM VT+ G L++EERNLLSVAYKNVVGA
Sbjct: 3 PNFVSKCSREELIHLAKMAEQAERYDDMVNAMSAVTKEGKPLNDEERNLLSVAYKNVVGA 62
Query: 227 RRSSWRVIS*LNRK 268
RRSSWRVIS + +K
Sbjct: 63 RRSSWRVISSMEQK 76
Score = 91.9 bits (218), Expect = 6e-19
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 3/135 (2%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKAS---NPESKVFYLKM 426
+EQK E + K+YR + EL C +VL +L+ +L+ N E+KVFYLKM
Sbjct: 73 MEQKAP--EEMAALTKKYREDITNELNGKCAEVLDILENYLLKDGQDDINTEAKVFYLKM 130
Query: 427 KGDYYRYLAEVATGETRHSVVEDSQKASKMLLKSARRKCSPHTP*GWVWR*ISQFFYYEI 606
+GDY+RYL EVA G++R +E S++A K A + SP P FYYEI
Sbjct: 131 RGDYHRYLVEVAEGDSRKENIEKSREAYKDASAKA-EELSPSHPIRLGLALNFSVFYYEI 189
Query: 607 LNSPDKACQLAKTGF 651
N P +AC+LAK F
Sbjct: 190 ENKPPEACKLAKEAF 204
>SB_34217| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 90.6 bits (215), Expect = 1e-18
Identities = 44/70 (62%), Positives = 54/70 (77%)
Frame = +2
Query: 59 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 238
M V +E L+ AKL+EQ +RYD+MA MKEV+E +LS EERNLLSV+YKN+VG RRSS
Sbjct: 80 MMVVRETLIYNAKLSEQCDRYDEMAKIMKEVSEKYPKLSKEERNLLSVSYKNIVGQRRSS 139
Query: 239 WRVIS*LNRK 268
WRVIS + K
Sbjct: 140 WRVISSIEEK 149
Score = 78.6 bits (185), Expect = 6e-15
Identities = 37/72 (51%), Positives = 54/72 (75%)
Frame = +1
Query: 256 IEQKTEGSERKQQMAKEYRVKVEKELREICYDVLGLLDKHLIPKASNPESKVFYLKMKGD 435
IE+KT S + K+Y+ +EKEL+++C +VLG+L++ LIP A + E+KVFY K+KGD
Sbjct: 146 IEEKTAESS-SLAIVKKYKACIEKELKDLCKEVLGILER-LIPGAEDEENKVFYFKLKGD 203
Query: 436 YYRYLAEVATGE 471
YYRYLAE + G+
Sbjct: 204 YYRYLAEFSHGQ 215
>SB_34218| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 607
Score = 72.1 bits (169), Expect = 5e-13
Identities = 34/62 (54%), Positives = 43/62 (69%)
Frame = +2
Query: 59 MSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEERNLLSVAYKNVVGARRSS 238
M + ELVQ AKLAEQ ER++D+ MK+ E L+ E RNLLSV YKNVVG++R +
Sbjct: 186 MQDSRNELVQLAKLAEQTERFEDVILYMKKAIEINPSLNKEHRNLLSVGYKNVVGSKRFA 245
Query: 239 WR 244
WR
Sbjct: 246 WR 247
>SB_42896| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 994
Score = 30.3 bits (65), Expect = 2.0
Identities = 16/51 (31%), Positives = 28/51 (54%)
Frame = +2
Query: 35 ISPLPSSTMSVDKEELVQRAKLAEQAERYDDMAAAMKEVTETGVELSNEER 187
+SPLPS+ +E+V KLAE+ E ++++ T+ E + EE+
Sbjct: 643 VSPLPSTATEDQMQEVVDSNKLAEKKEVTEEVSPVKPLSTKESKENALEEK 693
>SB_52435| Best HMM Match : RYDR_ITPR (HMM E-Value=1.4)
Length = 954
Score = 29.1 bits (62), Expect = 4.6
Identities = 17/66 (25%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
Frame = -2
Query: 818 VPRPSGKARSANRLWSALKSKKRSSYPPQQLPLFNVESW*RISVQCVQFRRMGNRR--NP 645
+PR S A SA++ + L + + Q++P + + W R+ + F R R NP
Sbjct: 126 LPRTSEPAMSASQFLNVLNDPEENKRLVQKIPGYLINCWSRVVEEFCHFVRTEARTACNP 185
Query: 644 VLAS*H 627
++ + H
Sbjct: 186 IMMNSH 191
>SB_3265| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 118
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 468 RNQTFCCRGFTESIQDAFEISKAKMQPTHPIR 563
+N+T CC G T S ++ F + K K P R
Sbjct: 10 KNKTICCPGRTFSYKEVFSMGKRKSASLSPQR 41
>SB_5537| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 496
Score = 28.7 bits (61), Expect = 6.1
Identities = 21/74 (28%), Positives = 31/74 (41%), Gaps = 1/74 (1%)
Frame = +1
Query: 334 REICYDVLGLLDKHLIPKASNPESKVFYLKMKGDYYRYLAEVATGET-RHSVVEDSQKAS 510
R + L +HL+P+A + S+ F + R+L A T RH V S S
Sbjct: 393 RHLVPRALDSTSRHLVPRALDSTSRHFVPQALDSTSRHLVPRALDSTSRHLVPRASDSTS 452
Query: 511 KMLLKSARRKCSPH 552
+ L+ A S H
Sbjct: 453 RHLVPQALDSTSRH 466
>SB_30638| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 318
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 2/47 (4%)
Frame = +1
Query: 196 FSCL*ECRRCPTVIMACHFLIEQKTEGSERKQQMA--KEYRVKVEKE 330
FSC EC R + + +F IE+ ++G + + KE + K+EK+
Sbjct: 46 FSCTRECSRAEGLCASVNFYIEKGSDGKHLCELLTDDKEQQGKLEKD 92
>SB_12646| Best HMM Match : SSrecog (HMM E-Value=0)
Length = 783
Score = 28.3 bits (60), Expect = 8.1
Identities = 11/34 (32%), Positives = 22/34 (64%)
Frame = +1
Query: 286 KQQMAKEYRVKVEKELREICYDVLGLLDKHLIPK 387
K++M ++Y K+EKE+ Y+++ L K ++ K
Sbjct: 292 KEEMKEKYDGKIEKEMSGAIYEIISRLMKAVVGK 325
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,415,894
Number of Sequences: 59808
Number of extensions: 580384
Number of successful extensions: 1583
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1438
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1578
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2347493764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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