BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30804 (760 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 24 1.3 AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 24 1.3 EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. 24 1.8 EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. 24 1.8 AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 23 2.4 AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 23 2.4 AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor ... 22 7.2 AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 21 9.5 >AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule AbsCAM-Ig7B protein. Length = 1923 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 736 PPFALQPPSAVESSN 692 P F ++PPS VE SN Sbjct: 30 PSFVMEPPSRVEFSN 44 >AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member AbsCAM-Ig7A protein. Length = 1919 Score = 24.2 bits (50), Expect = 1.3 Identities = 9/15 (60%), Positives = 11/15 (73%) Frame = -1 Query: 736 PPFALQPPSAVESSN 692 P F ++PPS VE SN Sbjct: 30 PSFVMEPPSRVEFSN 44 >EF625897-1|ABR45904.1| 684|Apis mellifera hexamerin protein. Length = 684 Score = 23.8 bits (49), Expect = 1.8 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = -1 Query: 64 WVDNLLLNTFFTALRQAFIF 5 +++++ LNT++ LRQAF F Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242 >EF591128-1|ABQ59246.1| 684|Apis mellifera hexamerin 70a protein. Length = 684 Score = 23.8 bits (49), Expect = 1.8 Identities = 9/20 (45%), Positives = 16/20 (80%) Frame = -1 Query: 64 WVDNLLLNTFFTALRQAFIF 5 +++++ LNT++ LRQAF F Sbjct: 223 FIEDIGLNTYYFFLRQAFPF 242 >AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor protein. Length = 1770 Score = 23.4 bits (48), Expect = 2.4 Identities = 11/21 (52%), Positives = 15/21 (71%) Frame = -2 Query: 261 D*LNLRKDLSASVSACRSARE 199 D LNLR D+S+S S+ S+ E Sbjct: 363 DILNLRTDISSSSSSISSSEE 383 >AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. Length = 735 Score = 23.4 bits (48), Expect = 2.4 Identities = 10/29 (34%), Positives = 17/29 (58%), Gaps = 2/29 (6%) Frame = +1 Query: 91 QGSVYVQQEASRHH--ACQPYPGNENCFG 171 Q S+Y+QQ+ +HH + + N+ FG Sbjct: 94 QHSLYLQQQQQQHHQDSSSEHASNQERFG 122 >AB267886-1|BAF46356.1| 567|Apis mellifera ecdysteroid receptor A isoform protein. Length = 567 Score = 21.8 bits (44), Expect = 7.2 Identities = 8/17 (47%), Positives = 10/17 (58%) Frame = -2 Query: 681 DLETGLHFNTLHLFGCK 631 D +G H+N L GCK Sbjct: 192 DRASGYHYNALTCEGCK 208 >AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate receptor protein. Length = 1040 Score = 21.4 bits (43), Expect = 9.5 Identities = 8/21 (38%), Positives = 13/21 (61%) Frame = +2 Query: 581 QGHRERPAHGIYPLGRCLHPK 643 +GH +R +YPL R +P+ Sbjct: 59 EGHDDREQPSVYPLLRFENPE 79 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 211,428 Number of Sequences: 438 Number of extensions: 4827 Number of successful extensions: 12 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 11 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 12 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 23875740 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -