Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30800
(743 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 164 2e-42
AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein. 27 0.46
CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein ... 27 0.61
AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox prote... 25 3.3
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.3
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.3
AY745224-1|AAU93491.1| 103|Anopheles gambiae cytochrome P450 pr... 24 4.3
AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein pr... 24 4.3
AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP prot... 23 10.0
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 164 bits (399), Expect = 2e-42
Identities = 86/148 (58%), Positives = 95/148 (64%)
Frame = +3
Query: 255 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 434
PEGTIVCNLEEK GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVG
Sbjct: 108 PEGTIVCNLEEKTGDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVG 167
Query: 435 IVAGGGRIDKPILKAGRAYHKYKVNVTAGHMYXXXXXXXXXXXXXXXXXXXXXRLPLSRR 614
IVAGGGRIDKPILKAGRAYHKYKV + +R
Sbjct: 168 IVAGGGRIDKPILKAGRAYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
Query: 615 GDICWSQSWAYCCSQGPGRIRGGKTDSK 698
G + ++ GRIRGGK D K
Sbjct: 228 GTPP-GRKVGLIAARRTGRIRGGKGDEK 254
Score = 105 bits (253), Expect = 1e-24
Identities = 47/59 (79%), Positives = 52/59 (88%)
Frame = +2
Query: 2 RKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 178
RKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAVV+FRDPY+F+ K+LFIA EG
Sbjct: 23 RKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAVVNFRDPYRFRLSKQLFIAAEG 81
Score = 82.2 bits (194), Expect = 2e-17
Identities = 33/36 (91%), Positives = 35/36 (97%)
Frame = +2
Query: 506 QRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKK 613
+RNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVK+
Sbjct: 192 KRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKR 227
Score = 44.8 bits (101), Expect = 3e-06
Identities = 17/38 (44%), Positives = 27/38 (71%)
Frame = +1
Query: 178 LYTGQFVYCGKXSTLEVGNVMPVGAILRVPLCAILKRK 291
+YTGQFVYCG+ + L++GNV+P+G + + L+ K
Sbjct: 82 MYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEK 119
Score = 25.0 bits (52), Expect = 2.5
Identities = 11/17 (64%), Positives = 13/17 (76%)
Frame = +1
Query: 610 EEGTSAGRKVGPIAARK 660
+ GT GRKVG IAAR+
Sbjct: 226 KRGTPPGRKVGLIAARR 242
>AY994095-1|AAX86008.1| 144|Anopheles gambiae unknown protein.
Length = 144
Score = 27.5 bits (58), Expect = 0.46
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = +3
Query: 411 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 497
S+ + +G V GG D IL GRAYH+
Sbjct: 81 SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109
>CR954257-4|CAJ14155.1| 196|Anopheles gambiae predicted protein
protein.
Length = 196
Score = 27.1 bits (57), Expect = 0.61
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = +1
Query: 109 GCCTLPRSIQVQDKEGALHCSRRLYTGQFVYCGKXSTLE 225
GCC LP + Q K+ + + + R T F Y + S +E
Sbjct: 16 GCCALPANTNAQTKQDSSNNNNRT-TELFAYPAEQSAIE 53
>AJ439353-4|CAD27926.1| 338|Anopheles gambiae putative hox protein
protein.
Length = 338
Score = 24.6 bits (51), Expect = 3.3
Identities = 7/15 (46%), Positives = 13/15 (86%)
Frame = +2
Query: 413 KQQRHGRYCCWRWTY 457
+QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 44 RHGYIKGVVKDIIHDP 91
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.3
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 44 RHGYIKGVVKDIIHDP 91
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AY745224-1|AAU93491.1| 103|Anopheles gambiae cytochrome P450
protein.
Length = 103
Score = 24.2 bits (50), Expect = 4.3
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 119 HFRDPYKFKTRKELFIAPEGSTQA 190
HF DPYK+ ++ F A G ++A
Sbjct: 28 HFADPYKYDPKR--FAAENGGSKA 49
>AF387862-1|AAL56547.1| 476|Anopheles gambiae gag polyprotein
protein.
Length = 476
Score = 24.2 bits (50), Expect = 4.3
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 3/54 (5%)
Frame = -3
Query: 309 DDLYHPFSLQDC-TQWYPQDSSNRHHISNFKS*XLSTINKLACVE--PSGAMKS 157
DD HP ++DC T D+ +HH S +S + KL E SG M++
Sbjct: 64 DDCQHPL-IRDCKTAKGTWDALQKHHQKTTMSTKVSLLKKLCKAEYDESGDMEA 116
>AJ439060-4|CAD27755.1| 151|Anopheles gambiae putative sRNP
protein.
Length = 151
Score = 23.0 bits (47), Expect = 10.0
Identities = 7/13 (53%), Positives = 10/13 (76%)
Frame = -2
Query: 463 LSIRPPPATIPTM 425
+ +RPPP +PTM
Sbjct: 114 MGMRPPPMMVPTM 126
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 886,840
Number of Sequences: 2352
Number of extensions: 21137
Number of successful extensions: 51
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 51
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 76507752
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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