Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30800
(743 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical pr... 142 2e-34
Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical pr... 30 2.0
U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical p... 30 2.0
Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical p... 28 6.1
Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical pr... 28 6.1
U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in bl... 28 8.0
U64859-8|AAC69096.1| 378|Caenorhabditis elegans Prion-like-(q/n... 28 8.0
>Z81453-1|CAB03792.1| 260|Caenorhabditis elegans Hypothetical
protein B0250.1 protein.
Length = 260
Score = 142 bits (345), Expect = 2e-34
Identities = 61/83 (73%), Positives = 73/83 (87%)
Frame = +3
Query: 255 PEGTIVCNLEEKMGDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVG 434
PEGT +CN+E K GDRG +ARASGN+ATVI HNPD K+TR++LPSGAKKV+ S NR M+G
Sbjct: 108 PEGTTICNVENKSGDRGVIARASGNYATVIAHNPDTKKTRIRLPSGAKKVVQSVNRAMIG 167
Query: 435 IVAGGGRIDKPILKAGRAYHKYK 503
+VAGGGR DKP+LKAGR+YHKYK
Sbjct: 168 LVAGGGRTDKPLLKAGRSYHKYK 190
Score = 104 bits (249), Expect = 8e-23
Identities = 46/59 (77%), Positives = 51/59 (86%)
Frame = +2
Query: 2 RKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTRKELFIAPEG 178
RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA++ FRDPYK+KT K +A EG
Sbjct: 23 RKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAIIAFRDPYKYKTVKTTVVAAEG 81
Score = 72.9 bits (171), Expect = 2e-13
Identities = 29/38 (76%), Positives = 33/38 (86%)
Frame = +2
Query: 500 QGQRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKK 613
+ +RN WP VRGVAMNPVEHPHGGGNHQHIG STV++
Sbjct: 190 KAKRNSWPRVRGVAMNPVEHPHGGGNHQHIGHPSTVRR 227
Score = 38.7 bits (86), Expect = 0.004
Identities = 11/26 (42%), Positives = 22/26 (84%)
Frame = +1
Query: 178 LYTGQFVYCGKXSTLEVGNVMPVGAI 255
++TGQF++CG + +++GN++PVG +
Sbjct: 82 MHTGQFIHCGAKAQIQIGNIVPVGTL 107
>Z81586-6|CAB04697.2| 393|Caenorhabditis elegans Hypothetical
protein T05F1.8 protein.
Length = 393
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 511 TLTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 389
TLT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 308 TLTALQWFIYDSFKVAMNLPRPPPPQMPESLKKKLGIPGTTEVAP 352
>U49830-16|AAK31480.1| 392|Caenorhabditis elegans Hypothetical
protein C33F10.12 protein.
Length = 392
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -2
Query: 511 TLTLYLWYALPAFKIGLSI-RPPPATIP---TMPLLLDGRTFLAP 389
TLT W+ +FK+ +++ RPPP +P L + G T +AP
Sbjct: 308 TLTALQWFIYDSFKVAMNLPRPPPPRMPESLKKKLGIPGTTEVAP 352
>Z81589-11|CAI58924.1| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 47 HGYIKGVVKDIIHDPGRGAPLAVVHFR 127
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z81555-8|CAB04512.2| 330|Caenorhabditis elegans Hypothetical
protein F58E10.6 protein.
Length = 330
Score = 28.3 bits (60), Expect = 6.1
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 47 HGYIKGVVKDIIHDPGRGAPLAVVHFR 127
HG + +V I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311
>Z68338-1|CAA92757.1| 134|Caenorhabditis elegans Hypothetical
protein T24B8.1 protein.
Length = 134
Score = 28.3 bits (60), Expect = 6.1
Identities = 14/22 (63%), Positives = 16/22 (72%)
Frame = +3
Query: 342 IGHNPDAKRTRVKLPSGAKKVL 407
IGH D +RTR LP+G KKVL
Sbjct: 57 IGHGSD-RRTRFVLPNGYKKVL 77
>U64859-9|AAC69090.1| 378|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 9 protein.
Length = 378
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -3
Query: 501 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 322
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 321 RHVPDDLYHPFSLQDC 274
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
>U64859-8|AAC69096.1| 378|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 57
protein.
Length = 378
Score = 27.9 bits (59), Expect = 8.0
Identities = 22/76 (28%), Positives = 27/76 (35%)
Frame = -3
Query: 501 CTCGMPFQLSK*VCQYVHLQQQYRPCLCCLMAEPSWLQTVALLLYA*HQDCVQSQWRSFQ 322
C+C Q CQ +QQQ C C A+P QTV + C QS + Q
Sbjct: 37 CSCQQVQQTQSCSCQSAPVQQQAPSCSC---AQPQQTQTVQVQSTQCAPACQQSCRQQCQ 93
Query: 321 RHVPDDLYHPFSLQDC 274
P Q C
Sbjct: 94 SAPAVSQCQPMCQQQC 109
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,895,821
Number of Sequences: 27780
Number of extensions: 443295
Number of successful extensions: 1205
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1205
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1756472266
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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