Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30799
(832 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p pro... 190 2e-48
AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation ... 190 2e-48
AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation ... 190 2e-48
AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-P... 190 2e-48
AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-P... 190 2e-48
BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p pro... 94 2e-19
AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA ... 32 1.1
AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC... 30 3.4
AE014298-2161|AAF48463.1| 916|Drosophila melanogaster CG6324-PA... 30 4.5
AY058376-1|AAL13605.1| 499|Drosophila melanogaster GH14326p pro... 29 7.8
AE013599-3349|AAF46811.1| 499|Drosophila melanogaster CG3045-PA... 29 7.8
>BT001612-1|AAN71367.1| 460|Drosophila melanogaster RE32823p
protein.
Length = 460
Score = 190 bits (463), Expect = 2e-48
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = +2
Query: 257 MSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYES 436
MSCNLITGMFQRLDKMRK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE
Sbjct: 361 MSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEV 420
Query: 437 YDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
YDWKKLD SEETKKLV YFSW+ TDKDGRKFNQGKIF+
Sbjct: 421 YDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 460
Score = 107 bits (257), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKV 254
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EYKY EEL+KV
Sbjct: 305 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKV 359
>AF148814-1|AAF26671.1| 431|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 431
Score = 190 bits (463), Expect = 2e-48
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = +2
Query: 257 MSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYES 436
MSCNLITGMFQRLDKMRK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE
Sbjct: 332 MSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEV 391
Query: 437 YDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
YDWKKLD SEETKKLV YFSW+ TDKDGRKFNQGKIF+
Sbjct: 392 YDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
Score = 107 bits (257), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKV 254
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EYKY EEL+KV
Sbjct: 276 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKV 330
>AF148813-1|AAF26670.1| 360|Drosophila melanogaster translation
elongation factor1 gamma protein.
Length = 360
Score = 190 bits (463), Expect = 2e-48
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = +2
Query: 257 MSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYES 436
MSCNLITGMFQRLDKMRK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE
Sbjct: 261 MSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEV 320
Query: 437 YDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
YDWKKLD SEETKKLV YFSW+ TDKDGRKFNQGKIF+
Sbjct: 321 YDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 360
Score = 107 bits (257), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKV 254
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EYKY EEL+KV
Sbjct: 205 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKV 259
>AE014297-4355|AAN14165.1| 431|Drosophila melanogaster CG11901-PB,
isoform B protein.
Length = 431
Score = 190 bits (463), Expect = 2e-48
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = +2
Query: 257 MSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYES 436
MSCNLITGMFQRLDKMRK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE
Sbjct: 332 MSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEV 391
Query: 437 YDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
YDWKKLD SEETKKLV YFSW+ TDKDGRKFNQGKIF+
Sbjct: 392 YDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
Score = 107 bits (257), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKV 254
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EYKY EEL+KV
Sbjct: 276 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKV 330
>AE014297-4354|AAF56877.2| 431|Drosophila melanogaster CG11901-PA,
isoform A protein.
Length = 431
Score = 190 bits (463), Expect = 2e-48
Identities = 83/100 (83%), Positives = 89/100 (89%)
Frame = +2
Query: 257 MSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELVFPLSSDWQVDYES 436
MSCNLITGMFQRLDKMRK AFASVCLFGED NSTISG+WVWRG++L F LS DWQ+DYE
Sbjct: 332 MSCNLITGMFQRLDKMRKAAFASVCLFGEDGNSTISGIWVWRGQDLAFTLSPDWQIDYEV 391
Query: 437 YDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
YDWKKLD SEETKKLV YFSW+ TDKDGRKFNQGKIF+
Sbjct: 392 YDWKKLDAKSEETKKLVTQYFSWSGTDKDGRKFNQGKIFK 431
Score = 107 bits (257), Expect = 2e-23
Identities = 45/55 (81%), Positives = 51/55 (92%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEYKYPEELAKV 254
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EYKY EEL+KV
Sbjct: 276 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDAENYSIWFGEYKYNEELSKV 330
>BT012478-1|AAS93749.1| 341|Drosophila melanogaster RE15368p
protein.
Length = 341
Score = 93.9 bits (223), Expect = 2e-19
Identities = 38/46 (82%), Positives = 43/46 (93%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEAKSIPYFWEKFDPENYSIWYAEY 227
FD++PKGTFN DDFKRVYSNEDEAKSIPYF++KFD ENYSIW+ EY
Sbjct: 296 FDALPKGTFNFDDFKRVYSNEDEAKSIPYFFDKFDTENYSIWFGEY 341
>AE014134-808|AAF50957.4| 1286|Drosophila melanogaster CG3047-PA
protein.
Length = 1286
Score = 31.9 bits (69), Expect = 1.1
Identities = 30/105 (28%), Positives = 42/105 (40%)
Frame = +3
Query: 324 PSACLVKTTIPPSPECGCGAERSSCSRCRLIGRWTTSPTTGRNWILRARRPRNLSRTTSR 503
PS TT P S + S+C+ R TT+P+T R PR S TT+
Sbjct: 342 PSTSRPTTTTPRST-----TKTSTCAPTTTTPRPTTTPSTSRP---TTTTPR--STTTTS 391
Query: 504 GTKPTKTVESSTRARYFK*MPTNVPANVYTFHTNNYKKLLPKKET 638
++PT T ST + T P + T T+ P+ T
Sbjct: 392 TSRPTTTTPRSTTTTTTRRPTTTTPRSTTTTSTSRPTTTTPRSTT 436
Score = 29.5 bits (63), Expect = 5.9
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 3/107 (2%)
Frame = +3
Query: 327 SACLVKTTIPPSPEC---GCGAERSSCSRCRLIGRWTTSPTTGRNWILRARRPRNLSRTT 497
S C +TT P+P C G +C++ R TT+ +T R PR S TT
Sbjct: 192 SPCTQETTT-PTPTCSTQGTQTTPCTCAQTTTTPRSTTTTSTSRP---TTTTPR--STTT 245
Query: 498 SRGTKPTKTVESSTRARYFK*MPTNVPANVYTFHTNNYKKLLPKKET 638
+ ++PT T ST + T P T T P+ T
Sbjct: 246 TTTSRPTTTTPRSTTTTTTRRPTTTTPRCTTTTSTCAPTTTTPRSTT 292
>AE013599-616|AAF59114.3| 4699|Drosophila melanogaster CG33087-PC
protein.
Length = 4699
Score = 30.3 bits (65), Expect = 3.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Frame = +3
Query: 297 TKCAN--RLSHPSAC-LVKTTIPPSPECGC--GAERSSCSRCRLIGRWTTSPTT 443
T+C + S P C V P S EC C G ++ +RCR I T PTT
Sbjct: 194 TRCVDYDECSEPGTCDQVCRNTPGSYECSCVSGYAKTKGNRCRAINVPPTEPTT 247
>AE014298-2161|AAF48463.1| 916|Drosophila melanogaster CG6324-PA
protein.
Length = 916
Score = 29.9 bits (64), Expect = 4.5
Identities = 14/46 (30%), Positives = 24/46 (52%)
Frame = +3
Query: 471 RPRNLSRTTSRGTKPTKTVESSTRARYFK*MPTNVPANVYTFHTNN 608
+PR+++ S + PT ++ S+ A +P N P + HTNN
Sbjct: 626 KPRHVTPNPSTQSNPTISMPSNVTADPTYWIPNNFPMQLANLHTNN 671
>AY058376-1|AAL13605.1| 499|Drosophila melanogaster GH14326p
protein.
Length = 499
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 454 QFLPVVGLVVHLPIRRQREHELLSAPHPHSGDGGIVVFTKQADGCESLFA 305
Q+ P +GL ++L R+H S HP SGD AD L A
Sbjct: 340 QYTPAIGLPLNLFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNA 389
>AE013599-3349|AAF46811.1| 499|Drosophila melanogaster CG3045-PA
protein.
Length = 499
Score = 29.1 bits (62), Expect = 7.8
Identities = 17/50 (34%), Positives = 22/50 (44%)
Frame = -1
Query: 454 QFLPVVGLVVHLPIRRQREHELLSAPHPHSGDGGIVVFTKQADGCESLFA 305
Q+ P +GL ++L R+H S HP SGD AD L A
Sbjct: 340 QYTPAIGLPLNLFRCDFRDHTTRSVNHPSSGDADEEAMDTAADESNDLNA 389
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,612,512
Number of Sequences: 53049
Number of extensions: 966329
Number of successful extensions: 2900
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2627
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2897
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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