Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30799
(832 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 153 2e-37
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 153 2e-37
Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical pr... 31 1.0
U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein. 31 1.0
L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical pr... 31 1.3
U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical p... 30 1.8
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 30 2.3
AF068709-12|AAO26013.1| 304|Caenorhabditis elegans Serpentine r... 30 2.3
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 30 2.3
AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical ... 29 4.1
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 29 5.4
Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical pr... 28 7.1
AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calc... 28 7.1
AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calc... 28 7.1
AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPas... 28 7.1
Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical pr... 28 9.4
AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like ... 28 9.4
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 153 bits (370), Expect = 2e-37
Identities = 69/113 (61%), Positives = 82/113 (72%)
Frame = +2
Query: 218 CRIQIP*GTR*GVMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 397
C + P MSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 254 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 313
Query: 398 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
F LS DWQVDYESY W KLD S+ TKK V +Y W E D G+KFNQGKIF+
Sbjct: 314 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMW-EGDFGGKKFNQGKIFK 365
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEEL 245
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 210 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDL 262
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 153 bits (370), Expect = 2e-37
Identities = 69/113 (61%), Positives = 82/113 (72%)
Frame = +2
Query: 218 CRIQIP*GTR*GVMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 397
C + P MSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 262 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 321
Query: 398 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
F LS DWQVDYESY W KLD S+ TKK V +Y W E D G+KFNQGKIF+
Sbjct: 322 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMW-EGDFGGKKFNQGKIFK 373
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEEL 245
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 218 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDL 270
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 153 bits (370), Expect = 2e-37
Identities = 69/113 (61%), Positives = 82/113 (72%)
Frame = +2
Query: 218 CRIQIP*GTR*GVMSCNLITGMFQRLDKMRKQAFASVCLFGEDNNSTISGVWVWRGKELV 397
C + P MSCNLI GM+QRL+K++K AFAS+ LFG DNNSTISG+WVW+G +L
Sbjct: 287 CEYKYPEDLTLAFMSCNLINGMYQRLEKLKKNAFASMILFGTDNNSTISGIWVWKGDKLA 346
Query: 398 FPLSSDWQVDYESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQ 556
F LS DWQVDYESY W KLD S+ TKK V +Y W E D G+KFNQGKIF+
Sbjct: 347 FELSPDWQVDYESYTWTKLDAKSDATKKEVNEYLMW-EGDFGGKKFNQGKIFK 398
Score = 85.0 bits (201), Expect = 6e-17
Identities = 36/53 (67%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 90 FDSMPKGTFNMDDFKRVYSNEDEA-KSIPYFWEKFDPENYSIWYAEYKYPEEL 245
F MPKGTF +D+FKR YSNED A K+IP+FWE FD +N+SIW EYKYPE+L
Sbjct: 243 FQDMPKGTFVLDNFKRSYSNEDTATKAIPHFWENFDADNWSIWKCEYKYPEDL 295
>Z71259-7|CAA95793.1| 423|Caenorhabditis elegans Hypothetical
protein F13G3.8 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 393 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 283
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>U59210-1|AAB09669.1| 423|Caenorhabditis elegans EAT-5 protein.
Length = 423
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/37 (35%), Positives = 18/37 (48%)
Frame = -2
Query: 393 SSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 283
S F H TP+++ LL N T C I+ +WN
Sbjct: 346 SEFCLHKFTPDIIILLKMINNHTGDIVCTEIVGRMWN 382
>L07144-7|AAK21444.2| 646|Caenorhabditis elegans Hypothetical
protein R05D3.9 protein.
Length = 646
Score = 30.7 bits (66), Expect = 1.3
Identities = 16/42 (38%), Positives = 23/42 (54%)
Frame = +1
Query: 676 FFGKLSPPILLDFLLKTIQVIKLVFPIRPGFTLKLQFPEKRP 801
+ GK P L++F+ K+ I + I GFT L F +KRP
Sbjct: 442 YSGKFDPATLMEFITKSS--IPSIIGISNGFTTDLLFHQKRP 481
>U00054-3|AAM48546.1| 12268|Caenorhabditis elegans Hypothetical
protein K07E12.1b protein.
Length = 12268
Score = 30.3 bits (65), Expect = 1.8
Identities = 10/18 (55%), Positives = 15/18 (83%)
Frame = +2
Query: 401 PLSSDWQVDYESYDWKKL 454
PL D QVD+++Y+W+KL
Sbjct: 2672 PLGPDGQVDFQNYEWQKL 2689
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 396 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 283
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF068709-12|AAO26013.1| 304|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 57 protein.
Length = 304
Score = 29.9 bits (64), Expect = 2.3
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = -1
Query: 604 LV*NVYTLAGTFVGIHL-KYLALVELSTVFVGFVPREVVLDKFLGLLARRIQFLPVVGLV 428
L+ N+ T A T++ + L K+ + + + +VP + L K+ L +QFL L
Sbjct: 65 LLTNMLTYANTWIALRLEKFQSCIFMLRCVEFYVPSFLTLSKYFSLFFNNMQFLLAAVLN 124
Query: 427 VH 422
+H
Sbjct: 125 IH 126
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 29.9 bits (64), Expect = 2.3
Identities = 12/38 (31%), Positives = 17/38 (44%)
Frame = -2
Query: 396 TSSFPRHTHTPEMVELLSSPNRQTDAKACLRILSNLWN 283
T +P T + + + PN D CL IL N W+
Sbjct: 60 TEEYPNKPPTVKFISKMFHPNVYADGSICLDILQNRWS 97
>AF016670-7|AAB66102.3| 361|Caenorhabditis elegans Hypothetical
protein K02F6.2 protein.
Length = 361
Score = 29.1 bits (62), Expect = 4.1
Identities = 12/31 (38%), Positives = 18/31 (58%)
Frame = +3
Query: 123 DDFKRVYSNEDEAKSIPYFWEKFDPENYSIW 215
D+ V+ N+ + K P + KF PENY +W
Sbjct: 42 DELLAVF-NKFKGKKFPRKFPKFGPENYKVW 71
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 28.7 bits (61), Expect = 5.4
Identities = 9/26 (34%), Positives = 13/26 (50%)
Frame = +3
Query: 369 CGCGAERSSCSRCRLIGRWTTSPTTG 446
C C + + CRL+ W+ TTG
Sbjct: 696 CSCNGDTTESENCRLLSSWSEWTTTG 721
>Z68221-3|CAA92495.1| 1249|Caenorhabditis elegans Hypothetical protein
W09C2.3c protein.
Length = 1249
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1197 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1242
>Z68221-2|CAD59229.1| 1228|Caenorhabditis elegans Hypothetical protein
W09C2.3b protein.
Length = 1228
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1176 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1221
>Z68221-1|CAB61039.2| 1252|Caenorhabditis elegans Hypothetical protein
W09C2.3a protein.
Length = 1252
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1200 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1245
>Z66498-2|CAA91291.2| 419|Caenorhabditis elegans Hypothetical
protein M195.2 protein.
Length = 419
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/49 (28%), Positives = 22/49 (44%)
Frame = +3
Query: 300 KCANRLSHPSACLVKTTIPPSPECGCGAERSSCSRCRLIGRWTTSPTTG 446
KC+ + + + +P + CGC A S + CR R T S + G
Sbjct: 4 KCSTSTNISNRVCSCSPLPSTSSCGCQASSSCANSCRSTCRPTCSSSGG 52
>AY438645-1|AAR00672.1| 1249|Caenorhabditis elegans membrane Calcium
ATPase (136.9kD) (mca-1) protein.
Length = 1249
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1197 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1242
>AY438644-1|AAR00671.1| 1252|Caenorhabditis elegans membrane Calcium
ATPase (136.6kD) (mca-1) protein.
Length = 1252
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1200 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1245
>AJ223616-1|CAA11491.1| 1228|Caenorhabditis elegans calcium ATPase
protein.
Length = 1228
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 431 ESYDWKKLDPSSEETKKLVQDYFSWNETDKDGRKFNQGKIFQVNAD 568
+S DW K ++T K ++ DKD +K ++ + Q N D
Sbjct: 1176 KSADWAKEQKEKKKTFKQIKQVARGKSLDKDSKKHHKKRKDQTNVD 1221
>Z73102-7|CAA97420.1| 727|Caenorhabditis elegans Hypothetical
protein B0035.6 protein.
Length = 727
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -2
Query: 678 KLPNHPTLFNNLEWFPFLVKVFYSY 604
+LP+ TL N EW L +FYSY
Sbjct: 9 ELPDQKTLDMNKEWVQELEDIFYSY 33
>Z68750-3|CAA92964.2| 1092|Caenorhabditis elegans Hypothetical
protein K01A6.2 protein.
Length = 1092
Score = 27.9 bits (59), Expect = 9.4
Identities = 8/25 (32%), Positives = 16/25 (64%)
Frame = +3
Query: 153 DEAKSIPYFWEKFDPENYSIWYAEY 227
D+ + +P WE+ D +NY +Y ++
Sbjct: 327 DDPRELPPGWEQVDDQNYGTFYVDH 351
>AF068713-14|AAK73895.1| 172|Caenorhabditis elegans Ground-like
(grd related) protein29 protein.
Length = 172
Score = 27.9 bits (59), Expect = 9.4
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +3
Query: 333 CLVKTTIPPSPECGCGAERSS 395
C + PP P+CGCG ++ S
Sbjct: 63 CGIPPPPPPPPQCGCGRKKRS 83
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,944,975
Number of Sequences: 27780
Number of extensions: 512001
Number of successful extensions: 1677
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1548
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1670
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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