Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30798
         (829 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0764 + 31589040-31589309,31589322-31589529,31589892-31590193     31   1.1  
09_04_0715 + 19697134-19697211,19697212-19697300,19697416-196974...    29   6.0  
08_02_0580 - 18953208-18953513,18953668-18953868,18953929-189540...    29   6.0  
05_03_0242 + 10823312-10823342,10823662-10823732,10824010-108240...    29   6.0  
09_06_0234 - 21747724-21747839,21748027-21748096,21749157-217492...    28   7.9  

>02_05_0764 + 31589040-31589309,31589322-31589529,31589892-31590193
          Length = 259

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 23/43 (53%)
 Frame = +3

Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETL 356
           D  RC+RQ+RR ++ M     V  +   ++V V  SVD  E L
Sbjct: 143 DCERCERQVRRALAGMRGVQHVEVSRRQQKVTVTGSVDPHEVL 185


>09_04_0715 +
           19697134-19697211,19697212-19697300,19697416-19697485,
           19697756-19697816,19698223-19698461,19698578-19698704,
           19698908-19699181,19699479-19699611,19700023-19700109,
           19700231-19700365
          Length = 430

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/41 (36%), Positives = 21/41 (51%), Gaps = 1/41 (2%)
 Frame = +1

Query: 37  FTVEFGLCKE-NQQLKAYGAALLSSIGELLHALSDKPELRP 156
           F    G C E NQ+L AY  A + S+ ++LH     P  +P
Sbjct: 191 FVEMLGYCVEGNQRLVAYEFATMGSLHDILHGRKGVPGAQP 231


>08_02_0580 -
           18953208-18953513,18953668-18953868,18953929-18954009,
           18954096-18954410,18954493-18954636,18954733-18954822,
           18954907-18954983,18955122-18955182,18955264-18955490,
           18955581-18955740,18955825-18956025,18956114-18956209,
           18956380-18956565,18956641-18956810,18957044-18957275,
           18958652-18959029
          Length = 974

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 13/26 (50%), Positives = 14/26 (53%)
 Frame = -2

Query: 729 PNINGLKGIPAMYNFSSVKWGNSENL 652
           PNING   +P   N  SVKW   E L
Sbjct: 756 PNINGNTEVPVNPNIESVKWFFKERL 781


>05_03_0242 +
           10823312-10823342,10823662-10823732,10824010-10824021,
           10827329-10827394,10827564-10827766,10827977-10828266,
           10828377-10828468,10829876-10830344,10830670-10830978,
           10831290-10831364,10831457-10831614
          Length = 591

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 21/61 (34%), Positives = 31/61 (50%), Gaps = 3/61 (4%)
 Frame = +1

Query: 292 CASTLTQSA*RCSTPL---ISWKLSSGSSTPRCCISPTPLRSSRAHTSSDLLTFTVHNSG 462
           C+  L Q A R   P+   ISW L +  + PR C +   L++ + H+  DLL+   H  G
Sbjct: 429 CSLELNQRAAR-RVPVQTGISWMLET-MANPRQCKAMFRLKAEQIHSLHDLLSSKYHLHG 486

Query: 463 S 465
           S
Sbjct: 487 S 487


>09_06_0234 -
           21747724-21747839,21748027-21748096,21749157-21749294,
           21749389-21749493,21750157-21750527,21750612-21750694,
           21750803-21751063,21751425-21751606,21752539-21752649,
           21752727-21752798,21752883-21753036,21753329-21753341,
           21754015-21754084,21754409-21754485,21754582-21754640,
           21755327-21755580
          Length = 711

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -1

Query: 241 HLRRSQLRNRWAGTPGLGRVARMWMQARTVS 149
           HL   Q    W+ +PG+G +A++W + R  S
Sbjct: 447 HLDSEQEHKFWSNSPGIG-IAQLWAKVRMAS 476


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,606,814
Number of Sequences: 37544
Number of extensions: 492405
Number of successful extensions: 1320
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2279943096
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)