Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30798
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal catech... 120 1e-27
Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical pr... 110 1e-24
AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine... 110 1e-24
U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan hyd... 60 3e-09
U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan hyd... 60 3e-09
AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan hy... 60 3e-09
Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical pr... 29 3.1
Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 28 7.1
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 28 7.1
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 28 7.1
Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical pr... 28 9.4
AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassi... 28 9.4
AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical ... 28 9.4
>U80836-2|AAV58890.1| 454|Caenorhabditis elegans Abnormal
catecholamine distributionprotein 2, isoform b protein.
Length = 454
Score = 120 bits (290), Expect = 1e-27
Identities = 54/85 (63%), Positives = 67/85 (78%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLCKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSV 180
D IEKLSTVYWF VEFGLCKE+ +LKA GA LLS+ GEL+HA SD PE + F+PA T+V
Sbjct: 312 DEHIEKLSTVYWFIVEFGLCKEDGKLKAIGAGLLSAYGELMHACSDAPEHKDFDPAVTAV 371
Query: 181 QPYQDQEYQPIYYVAETFEDAKDKL 255
Q Y+D +YQP+Y+VA++ DA KL
Sbjct: 372 QKYEDDDYQPLYFVADSIHDALAKL 396
>Z66497-9|CAA91286.1| 457|Caenorhabditis elegans Hypothetical
protein K08F8.4 protein.
Length = 457
Score = 110 bits (265), Expect = 1e-24
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLCKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSV 180
D IEKL+T+YWFT+EFG+C+++ + KAYGA LLSS GEL +ALSDKPE+ F+PA V
Sbjct: 315 DDVIEKLATLYWFTIEFGICQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVCCV 374
Query: 181 QPYQDQEYQPIYYVAETFEDAKDKL 255
Y EYQP Y++AE+F AK+KL
Sbjct: 375 TKYPITEYQPKYFLAESFASAKNKL 399
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/56 (33%), Positives = 39/56 (69%)
Frame = +3
Query: 243 QRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAVKKL 410
+ +++ W +T++RPF++R+N +T+RVE+LD V L+ L + +++ L A+ K+
Sbjct: 396 KNKLKSWAATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451
>AF119388-1|AAD31643.1| 457|Caenorhabditis elegans phenylalanine
hydroxylase protein.
Length = 457
Score = 110 bits (265), Expect = 1e-24
Identities = 50/85 (58%), Positives = 65/85 (76%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLCKENQQLKAYGAALLSSIGELLHALSDKPELRPFEPASTSV 180
D IEKL+T+YWFT+EFG+C+++ + KAYGA LLSS GEL +ALSDKPE+ F+PA V
Sbjct: 315 DDVIEKLATLYWFTIEFGICQQDGEKKAYGAGLLSSFGELQYALSDKPEVVDFDPAVCCV 374
Query: 181 QPYQDQEYQPIYYVAETFEDAKDKL 255
Y EYQP Y++AE+F AK+KL
Sbjct: 375 TKYPITEYQPKYFLAESFASAKNKL 399
Score = 50.8 bits (116), Expect = 1e-06
Identities = 19/56 (33%), Positives = 39/56 (69%)
Frame = +3
Query: 243 QRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAVKKL 410
+ +++ W +T++RPF++R+N +T+RVE+LD V L+ L + +++ L A+ K+
Sbjct: 396 KNKLKSWAATINRPFQIRYNAYTQRVEILDKVAALQRLARDIRSDISTLEEALGKV 451
>U21308-14|ABB88222.1| 429|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform b protein.
Length = 429
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLC---------KEN----QQLKAYGAALLSSIGELLHALSDK 141
+ +++KL+T+Y+F++EFGL KEN ++ K YGA LLSS GEL HA+
Sbjct: 279 EEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVEGS 338
Query: 142 PELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKL 255
+ F+P Q +Q Y+ FE+A+ KL
Sbjct: 339 ATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKL 376
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 401
+ Q+++R + + M RPF VR+NP+TE VEVL++ + + L +++ L A+
Sbjct: 368 NFEEAQQKLRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 425
>U21308-13|ABB88221.1| 532|Caenorhabditis elegans Tryptophan
hydroxylase protein1, isoform a protein.
Length = 532
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLC---------KEN----QQLKAYGAALLSSIGELLHALSDK 141
+ +++KL+T+Y+F++EFGL KEN ++ K YGA LLSS GEL HA+
Sbjct: 382 EEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVEGS 441
Query: 142 PELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKL 255
+ F+P Q +Q Y+ FE+A+ KL
Sbjct: 442 ATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKL 479
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 401
+ Q+++R + + M RPF VR+NP+TE VEVL++ + + L +++ L A+
Sbjct: 471 NFEEAQQKLRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528
>AF135186-1|AAD30115.1| 532|Caenorhabditis elegans tryptophan
hydroxylase protein.
Length = 532
Score = 59.7 bits (138), Expect = 3e-09
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Frame = +1
Query: 1 DSEIEKLSTVYWFTVEFGLC---------KEN----QQLKAYGAALLSSIGELLHALSDK 141
+ +++KL+T+Y+F++EFGL KEN ++ K YGA LLSS GEL HA+
Sbjct: 382 EEDLKKLATLYFFSIEFGLSSDDAADSPVKENGSNHERFKVYGAGLLSSAGELQHAVEGS 441
Query: 142 PELRPFEPASTSVQPYQDQEYQPIYYVAETFEDAKDKL 255
+ F+P Q +Q Y+ FE+A+ KL
Sbjct: 442 ATIIRFDPDRVVEQECLITTFQSAYFYTRNFEEAQQKL 479
Score = 42.3 bits (95), Expect = 4e-04
Identities = 19/58 (32%), Positives = 35/58 (60%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLNTEMLHLTNAV 401
+ Q+++R + + M RPF VR+NP+TE VEVL++ + + L +++ L A+
Sbjct: 471 NFEEAQQKLRMFTNNMKRPFIVRYNPYTESVEVLNNSRSIMLAVNSLRSDINLLAGAL 528
>Z46934-7|CAA87047.1| 472|Caenorhabditis elegans Hypothetical
protein ZK1320.9 protein.
Length = 472
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = -1
Query: 604 TIRYKKRIQRSTIGWLSHLFTHVPRTPTTVLH 509
+++ K++ +S++ LS FT+ PR PT +LH
Sbjct: 2 SLKLAKQLSKSSVISLSRHFTNGPRLPTKLLH 33
>Z68220-10|CAA92491.2| 1843|Caenorhabditis elegans Hypothetical
protein T20D3.11 protein.
Length = 1843
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/62 (27%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Frame = +3
Query: 303 PHTERVEVLDSVDKLETLI---WQLNTEMLHLTNAVKKLKGSHFE*SPYLYSTQQWFSAR 473
P + V+ + V+K+ET + WQ + L NAV G+H + Y ++
Sbjct: 972 PSLQLVQSANDVEKMETAVSVDWQQKSSATRLLNAVVNCIGAHTDILCYFFAIMTQVMTG 1031
Query: 474 GL 479
GL
Sbjct: 1032 GL 1033
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLN 371
DLR + ++ + S F+V+++PH E + DK +W L+
Sbjct: 294 DLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK-RLHVWDLS 340
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLN 371
DLR + ++ + S F+V+++PH E + DK +W L+
Sbjct: 294 DLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK-RLHVWDLS 340
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 28.3 bits (60), Expect = 7.1
Identities = 13/48 (27%), Positives = 24/48 (50%)
Frame = +3
Query: 228 DLRRCQRQIRRWVSTMSRPFEVRFNPHTERVEVLDSVDKLETLIWQLN 371
DLR + ++ + S F+V+++PH E + DK +W L+
Sbjct: 294 DLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDK-RLHVWDLS 340
>Z77658-8|CAE17788.1| 79|Caenorhabditis elegans Hypothetical
protein F14D7.11 protein.
Length = 79
Score = 27.9 bits (59), Expect = 9.4
Identities = 13/32 (40%), Positives = 17/32 (53%)
Frame = +1
Query: 181 QPYQDQEYQPIYYVAETFEDAKDKLDAGCQPC 276
QPY Q QPIY V + + +D D C+ C
Sbjct: 20 QPYGQQGQQPIYVVQQQPQQNRDP-DGCCESC 50
>AY572975-1|AAT77228.1| 580|Caenorhabditis elegans KQT-3 potassium
channel protein.
Length = 580
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 590 FVPYCSIILPQLICLGLRKVHRFSELPHFTEEKLYIAGI 706
F+ + S+ L LICL L + E HF E LYI I
Sbjct: 36 FLYHFSVFLIVLICLILSVLSTVEEHSHFAAELLYILEI 74
>AL032648-2|CAA21699.2| 621|Caenorhabditis elegans Hypothetical
protein Y54G9A.3 protein.
Length = 621
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/39 (41%), Positives = 20/39 (51%)
Frame = +2
Query: 590 FVPYCSIILPQLICLGLRKVHRFSELPHFTEEKLYIAGI 706
F+ + S+ L LICL L + E HF E LYI I
Sbjct: 77 FLYHFSVFLIVLICLILSVLSTVEEHSHFAAELLYILEI 115
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,376,507
Number of Sequences: 27780
Number of extensions: 426477
Number of successful extensions: 1229
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 1148
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1226
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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