Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30796
         (776 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    23   2.1  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    23   2.7  
DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory pro...    23   3.6  
EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive pep...    22   4.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   4.8  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   6.3  
AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein ...    21   8.3  

>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = -2

Query: 502 SGWSREYSPFTTSPSRVSCWDL 437
           S WS   +P T     ++CW L
Sbjct: 305 STWSTVQTPTTVMSPTINCWSL 326


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 23.0 bits (47), Expect = 2.7
 Identities = 9/27 (33%), Positives = 11/27 (40%)
 Frame = -2

Query: 328 CTTGACCTGLKCWTTGEACIYEECSRG 248
           CT     +G+ C T  E C    C  G
Sbjct: 9   CTCPLGFSGINCQTNDEDCTETSCMNG 35


>DQ855492-1|ABH88179.1|  251|Tribolium castaneum chemosensory
           protein 6 protein.
          Length = 251

 Score = 22.6 bits (46), Expect = 3.6
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 364 IMSKIMLPRSMSSHIPSRIPTPAITSPNTKP 456
           ++S   LP + S+   + + T   T P+TKP
Sbjct: 155 VISSTPLPPTTSTTTRTTLTTKFTTKPSTKP 185


>EF222292-1|ABN79652.1|  354|Tribolium castaneum cardioactive
           peptide receptor 2 protein.
          Length = 354

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 10/25 (40%), Positives = 11/25 (44%)
 Frame = -3

Query: 432 RRCGDPRRNMRTHTSREHDLRHDRS 358
           R+C D R     H   EHD R   S
Sbjct: 249 RQCDDHRDRPPRHFHEEHDTRRASS 273


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 6/10 (60%), Positives = 8/10 (80%)
 Frame = +2

Query: 674  WWNSTSGSKW 703
            WW+ST+ S W
Sbjct: 1042 WWSSTTTSPW 1051


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 699 SGFQIWPLVSFNSNPW 746
           +GF +WP++   ++ W
Sbjct: 239 TGFVVWPIIEQRADLW 254


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 699 SGFQIWPLVSFNSNPW 746
           +GF +WP++   ++ W
Sbjct: 239 TGFVVWPIIEQRADLW 254


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 699 SGFQIWPLVSFNSNPW 746
           +GF +WP++   ++ W
Sbjct: 239 TGFVVWPIIEQRADLW 254


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.8 bits (44), Expect = 6.3
 Identities = 5/16 (31%), Positives = 11/16 (68%)
 Frame = +3

Query: 699 SGFQIWPLVSFNSNPW 746
           +GF +WP++   ++ W
Sbjct: 239 TGFVVWPIIEQRADLW 254


>AF236856-1|AAG17563.2|  370|Tribolium castaneum Kruppel protein
           protein.
          Length = 370

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 9/32 (28%), Positives = 15/32 (46%)
 Frame = +1

Query: 337 RFQLPSNTPIMSKIMLPRSMSSHIPSRIPTPA 432
           R  LP+N       +LP +  ++ P   P P+
Sbjct: 47  RLSLPTNPAFFHPGLLPLAWQANSPPSPPAPS 78


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 188,650
Number of Sequences: 336
Number of extensions: 4136
Number of successful extensions: 16
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20961338
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)