Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30796
(776 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical ... 36 0.043
U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interactin... 33 0.30
AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical... 32 0.40
AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical ... 31 0.92
AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein. 29 2.8
AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical ... 29 2.8
AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical ... 29 2.8
U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related... 29 3.7
U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in bl... 29 4.9
AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical... 29 4.9
Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical pr... 28 6.5
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 28 6.5
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 6.5
AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical ... 28 6.5
AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein. 28 6.5
Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical p... 28 8.6
Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical pr... 28 8.6
Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical pr... 28 8.6
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 8.6
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 28 8.6
>AF067222-1|AAC17017.2| 1464|Caenorhabditis elegans Hypothetical
protein H11E01.3 protein.
Length = 1464
Score = 35.5 bits (78), Expect = 0.043
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Frame = +3
Query: 261 SSYIHASPVVQHFSPVQHAPVVHHAAI--PIAVEHSDHVE--DHAPA--KYEF--SYSVE 416
S+ H+S +H + +PV + ++ P A EH +H E H+PA + EF S SV
Sbjct: 703 SNQFHSS---EHIEEARQSPVTNQESVHSPHASEHFEHREVVPHSPAASQEEFGRSPSVH 759
Query: 417 DPHTGDHKSQHE 452
PH +H HE
Sbjct: 760 SPHVSEHFEHHE 771
>U42841-12|AAC48169.2| 1030|Caenorhabditis elegans Gex interacting
protein protein16, isoform d protein.
Length = 1030
Score = 32.7 bits (71), Expect = 0.30
Identities = 17/55 (30%), Positives = 23/55 (41%), Gaps = 3/55 (5%)
Frame = +3
Query: 234 YCSRRPREH---SSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPA 389
Y RR H SSYIH+S +QH H P + ++H H P+
Sbjct: 78 YSERRASYHVESSSYIHSSQQIQHPPQQHHPPPPSPPPVAETIQHQPHPSQQQPS 132
>AL117204-37|CAB55148.2| 248|Caenorhabditis elegans Hypothetical
protein Y116A8C.10b protein.
Length = 248
Score = 32.3 bits (70), Expect = 0.40
Identities = 22/81 (27%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Frame = +1
Query: 208 APLIQHAGPIVH-AAPVNILRIYMLRQ*SNTSALCNMLQSCTTLRFQLPSNTPIMSKIML 384
A L+ H GP+ + ++ L+I +LR +N+ L SC + N+ S
Sbjct: 153 ADLVPHKGPVSYDRLHIDSLKI-ILRGSANSITLSRFFDSCLDRTRRTSLNSSSSSFFTK 211
Query: 385 PRSMSSHIPSRIPTPAITSPN 447
PRSM+ ++P + A + N
Sbjct: 212 PRSMTPNLPGASASAAAAAAN 232
>AF106579-5|AAC78198.1| 174|Caenorhabditis elegans Hypothetical
protein F54E2.2 protein.
Length = 174
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/26 (50%), Positives = 14/26 (53%)
Frame = -2
Query: 334 AWCTTGACCTGLKCWTTGEACIYEEC 257
+WCTT C G KC TG C Y C
Sbjct: 150 SWCTTDQDCKGKKCCPTG--CDYNVC 173
>AF063023-1|AAD20441.1| 1666|Caenorhabditis elegans AF-6 protein.
Length = 1666
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREH----SSYIHASPVVQHFSPVQHAPV-VHH 332
P E S + + FDS R+P ++ +S + S V SP+ P +H+
Sbjct: 296 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 353
Query: 333 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 494
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 354 LPVLIVMNNDGHLSTHRITLHEGVTGVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 408
>AF003135-4|AAO38590.1| 1039|Caenorhabditis elegans Hypothetical
protein W03F11.6e protein.
Length = 1039
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREH----SSYIHASPVVQHFSPVQHAPV-VHH 332
P E S + + FDS R+P ++ +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 333 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 494
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-3|AAO38589.1| 1184|Caenorhabditis elegans Hypothetical
protein W03F11.6d protein.
Length = 1184
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREH----SSYIHASPVVQHFSPVQHAPV-VHH 332
P E S + + FDS R+P ++ +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 333 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 494
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-2|AAO38588.1| 1419|Caenorhabditis elegans Hypothetical
protein W03F11.6c protein.
Length = 1419
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREH----SSYIHASPVVQHFSPVQHAPV-VHH 332
P E S + + FDS R+P ++ +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 333 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 494
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>AF003135-1|AAK18989.1| 1658|Caenorhabditis elegans Hypothetical
protein W03F11.6a protein.
Length = 1658
Score = 29.5 bits (63), Expect = 2.8
Identities = 26/115 (22%), Positives = 47/115 (40%), Gaps = 6/115 (5%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREH----SSYIHASPVVQHFSPVQHAPV-VHH 332
P E S + + FDS R+P ++ +S + S V SP+ P +H+
Sbjct: 294 PLFEMTARSGNGENGFDSFLA--IKRKPHDYQVPSTSVVAPSSVTLPMSPLTSLPPQIHN 351
Query: 333 AAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQHET-RDGDVVKGEYSLL 494
+ I + + H+ H +E V + SQH DG ++G ++ +
Sbjct: 352 LPVLIVMNNDGHLSTHRITLHEGVTEVGSDSQMSNFSQHNIYLDGPDIRGRHAAI 406
>U88308-9|AAB42325.1| 933|Caenorhabditis elegans Patched related
family protein 2 protein.
Length = 933
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = -1
Query: 449 VLGLVIAGVGILDGI*ELILRGSMIFDMIGV 357
+LG+V AG+ IL G+ L L G D++GV
Sbjct: 304 ILGVVSAGIAILTGVGFLSLMGMPYNDIVGV 334
>U58742-4|AAB36856.1| 242|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 3 protein.
Length = 242
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/59 (25%), Positives = 25/59 (42%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREHSSYIHASPVVQHFSPVQHAPVVHHAAIP 344
P+ + C + +PF + C+S C + + S A+ +PVQH P P
Sbjct: 21 PACQQSCQNQCKSAPFVNQCQSSCQQNCQTSSCSASAT-----LAPVQHVPQCQQQCAP 74
>AC024751-13|AAK21512.2| 488|Caenorhabditis elegans Hypothetical
protein Y18H1A.9 protein.
Length = 488
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 117 KHRSP*RAFSSSNGTLYPSIESCCSSTDSRSPFD 218
K+RSP + + G P +CC D FD
Sbjct: 247 KNRSPPKCIQQATGLFQPPTTTCCQGVDLNRNFD 280
>Z74037-5|CAA98493.3| 509|Caenorhabditis elegans Hypothetical
protein F57B7.4 protein.
Length = 509
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 343 GIAAWCTTGACCTGLKCWTTGEACIYEECSRGRREQ*DRHVESKGLRE 200
G WC G+C K W + + CS+ + + +SK RE
Sbjct: 449 GYNMWCLEGSCVQNTKKWMDCKDINSKTCSKYSTSKLKHYCKSKDFRE 496
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 7/58 (12%)
Frame = +3
Query: 108 VFPKHRSP*RAFS-----SSNGTLYPSIE--SCCSSTDSRSPFDSTCRSYCSRRPREH 260
+ PK +P A+S SS G P+ S +S + R P S Y SRRP+E+
Sbjct: 145 ILPKRYAPREAYSISEKKSSTGGSDPATSGNSSGNSIEKRQPLPSINNRYVSRRPQEN 202
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/64 (26%), Positives = 21/64 (32%)
Frame = +3
Query: 258 HSSYIHASPVVQHFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDH 437
H + HA H HAP H H H H+PA + + E H H
Sbjct: 458 HGEHHHAPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHHSPAHH--GHHGEHHHAPAH 515
Query: 438 KSQH 449
H
Sbjct: 516 HGHH 519
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/60 (28%), Positives = 19/60 (31%), Gaps = 1/60 (1%)
Frame = +3
Query: 273 HASPVVQ-HFSPVQHAPVVHHAAIPIAVEHSDHVEDHAPAKYEFSYSVEDPHTGDHKSQH 449
H SP H HAP H H H E H + + H G H S H
Sbjct: 497 HHSPAHHGHHGEHHHAPAHHGHHGEHGTHHGHHGEHHHAPAHHGHHGEHGTHHGHHGSHH 556
>AC006809-3|AAY86286.1| 558|Caenorhabditis elegans Hypothetical
protein Y5H2A.4 protein.
Length = 558
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/51 (29%), Positives = 24/51 (47%)
Frame = +3
Query: 168 PSIESCCSSTDSRSPFDSTCRSYCSRRPREHSSYIHASPVVQHFSPVQHAP 320
P+ + C +PF + C+S C + + S Y A+P +PVQ P
Sbjct: 106 PACQQSCQMQCQSAPFVNECQSQCQQSCQTSSCYAPAAP-----APVQCMP 151
>AB044562-1|BAA96734.1| 509|Caenorhabditis elegans MIG-17 protein.
Length = 509
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/48 (27%), Positives = 20/48 (41%)
Frame = -2
Query: 343 GIAAWCTTGACCTGLKCWTTGEACIYEECSRGRREQ*DRHVESKGLRE 200
G WC G+C K W + + CS+ + + +SK RE
Sbjct: 449 GYNMWCLEGSCVQNTKKWMDCKDINSKTCSKYSTSKLKHYCKSKDFRE 496
>Z95559-16|CAB63365.3| 1440|Caenorhabditis elegans Hypothetical
protein Y41E3.9 protein.
Length = 1440
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = -1
Query: 731 ETYQGPDLKATWNQKLNSTR 672
E+ PD ++TWN KLNS R
Sbjct: 713 ESNTDPDSQSTWNLKLNSAR 732
>Z80220-2|CAD27608.1| 3185|Caenorhabditis elegans Hypothetical protein
T08G11.1b protein.
Length = 3185
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 222 TCRSYCSRRPREHSSYIHASPVVQHFS 302
T +Y S+RP+ + +H SP++ H S
Sbjct: 2766 TASTYRSQRPKSFYNDLHISPIMMHLS 2792
>Z80220-1|CAB02304.1| 3212|Caenorhabditis elegans Hypothetical protein
T08G11.1a protein.
Length = 3212
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/27 (37%), Positives = 17/27 (62%)
Frame = +3
Query: 222 TCRSYCSRRPREHSSYIHASPVVQHFS 302
T +Y S+RP+ + +H SP++ H S
Sbjct: 2793 TASTYRSQRPKSFYNDLHISPIMMHLS 2819
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = -3
Query: 471 RHHHHGFRVGTCDRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQR 331
RH HHG R G R G RRN S D D+ R+Q+ ++
Sbjct: 85 RHGHHG-RHGM-GRHGGHGRRNKSGSDSDSSDSSEDKKKRKQMRDKK 129
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 27.9 bits (59), Expect = 8.6
Identities = 20/62 (32%), Positives = 24/62 (38%), Gaps = 2/62 (3%)
Frame = -3
Query: 495 GVESIRLSRHHHHGFRVGTC--DRRCGDPRRNMRTHTSREHDLRHDRSVRRQLESQRGAR 322
G + R + HHH R D R D R R H + R DR R S+R R
Sbjct: 271 GADRKRSTEQHHHSHRSSRDHRDHRHRDHRGEHREHREHKEHRRDDR--HRSERSERSER 328
Query: 321 LE 316
E
Sbjct: 329 SE 330
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,697,475
Number of Sequences: 27780
Number of extensions: 420311
Number of successful extensions: 1434
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1872168044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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