Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30794
(730 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein ... 134 3e-33
CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein ... 26 1.0
AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical prote... 25 3.2
AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical prote... 25 3.2
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 3.2
DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reduct... 24 4.2
AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding prot... 24 5.5
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 7.3
AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha ... 23 7.3
EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton anti... 23 9.7
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein. 23 9.7
>AF164152-1|AAD47076.1| 261|Anopheles gambiae ribosomal protein L8
protein.
Length = 261
Score = 134 bits (323), Expect = 3e-33
Identities = 68/117 (58%), Positives = 79/117 (67%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1 MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
V+FRDPY+F+ + L + ++ MPEGTIV ++
Sbjct: 61 VNFRDPYRFRLSK-QLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNL 116
Score = 34.3 bits (75), Expect = 0.004
Identities = 19/50 (38%), Positives = 26/50 (52%)
Frame = +1
Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
F+ +G R+ L++GNV+P+G G NLEEK GDRG
Sbjct: 76 FIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIV-CNLEEKTGDRG 124
>CR954257-3|CAJ14154.1| 277|Anopheles gambiae predicted protein
protein.
Length = 277
Score = 26.2 bits (55), Expect = 1.0
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = -2
Query: 621 CGNAPSSFQNRVLFNNVPPPANNNRTHA 538
C N P LF NVP A R HA
Sbjct: 214 CKNRPEMLARERLFRNVPAAAGWQRQHA 241
>AJ439060-1|CAD27752.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 RHGYIKGVVKDIIHDP 178
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AJ438610-9|CAD27481.1| 763|Anopheles gambiae hypothetical protein
protein.
Length = 763
Score = 24.6 bits (51), Expect = 3.2
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +2
Query: 131 RHGYIKGVVKDIIHDP 178
R+ +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.6 bits (51), Expect = 3.2
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 388 GDRGSSGQRGLLGKLSP 438
GDRG G +GL+G+ P
Sbjct: 248 GDRGEIGVKGLMGQSGP 264
>DQ013245-1|AAY34441.1| 487|Anopheles gambiae adrenodoxin reductase
protein.
Length = 487
Score = 24.2 bits (50), Expect = 4.2
Identities = 14/45 (31%), Positives = 19/45 (42%)
Frame = -3
Query: 488 FTLVTLSHPGIVVPITVGESFPRRPRCPDEPLSPIFSSRLXLQWY 354
FTL L V +T G P+E L + S+R + WY
Sbjct: 110 FTLEELRERYHAVLLTYGAEQDNTLNIPNENLQNVLSAREFVAWY 154
>AY578802-1|AAT07307.1| 108|Anopheles gambiae FK506-binding protein
protein.
Length = 108
Score = 23.8 bits (49), Expect = 5.5
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +1
Query: 520 PFKATEGMGSVIVGWRWNVIEQN 588
PFK + G G VI GW V + +
Sbjct: 46 PFKFSVGKGEVIRGWDEGVAQMS 68
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.4 bits (48), Expect = 7.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -1
Query: 415 HVAQTNLYHPFSLQD*XYNGTLRHSLQQASHFQLQE 308
HVA +L+ F L+ NGT+ ++ S Q+ E
Sbjct: 147 HVATLSLHSLFELRSLLLNGTVMLDMEAVSLEQIAE 182
>AY027891-1|AAK15783.1| 801|Anopheles gambiae collagen IV alpha 1
chain precursor protein.
Length = 801
Score = 23.4 bits (48), Expect = 7.3
Identities = 8/19 (42%), Positives = 14/19 (73%)
Frame = +1
Query: 382 KMGDRGSSGQRGLLGKLSP 438
++G+RG G++GL G+ P
Sbjct: 330 QVGERGHKGEKGLPGQPGP 348
>EF014219-1|ABJ91581.1| 647|Anopheles gambiae cation proton
antiporter protein.
Length = 647
Score = 23.0 bits (47), Expect = 9.7
Identities = 12/35 (34%), Positives = 19/35 (54%)
Frame = +3
Query: 147 RELLRI*SMTLVEVHLWLLYTSAIHTSSRPRKELF 251
R+ RI S+ L+ V LW+ I ++ P +LF
Sbjct: 147 RQFARILSIILIGVLLWITAFVIIGDTAAPGGQLF 181
>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
Length = 1664
Score = 23.0 bits (47), Expect = 9.7
Identities = 13/43 (30%), Positives = 21/43 (48%)
Frame = -3
Query: 539 PSVALNGQKPFGSRTVAFTLVTLSHPGIVVPITVGESFPRRPR 411
PS+ + ++ G+ ++ L+T S P I FP RPR
Sbjct: 672 PSLMSSARESCGASALSRKLLTESAPPIAPMSPRPNRFPSRPR 714
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 850,471
Number of Sequences: 2352
Number of extensions: 19725
Number of successful extensions: 54
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 45
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 52
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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