Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30794
(730 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 130 7e-30
CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 130 7e-30
BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30
AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 122 2e-27
BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 55 3e-07
BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein. 32 2.4
BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein. 32 2.4
AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 32 2.4
AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 32 2.4
AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens ... 32 2.4
AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide relea... 32 2.4
>Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
>CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
>BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
>BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
>BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
>BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113
>BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
>AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8
protein.
Length = 257
Score = 130 bits (313), Expect = 7e-30
Identities = 66/114 (57%), Positives = 75/114 (65%)
Frame = +2
Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA
Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60
Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
V FRDPY+FK K L + +H MPEGTIV
Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113
>AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8
protein.
Length = 130
Score = 122 bits (293), Expect = 2e-27
Identities = 62/110 (56%), Positives = 71/110 (64%)
Frame = +2
Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214
IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR
Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60
Query: 215 DPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364
DPY+FK K L + +H MPEGTIV
Sbjct: 61 DPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 109
>BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein.
Length = 211
Score = 54.8 bits (126), Expect = 3e-07
Identities = 31/68 (45%), Positives = 34/68 (50%)
Frame = +2
Query: 161 DIIHDPGRGAPLAVVHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXX 340
DIIHDPGRGAPLA V FRDPY+FK K L + +H
Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVG 59
Query: 341 AMPEGTIV 364
MPEGTIV
Sbjct: 60 TMPEGTIV 67
>BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein.
Length = 659
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 435 EWAPGVTPKPDRVT 448
>BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein.
Length = 659
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 435 EWAPGVTPKPDRVT 448
>AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing
protein 4 variant 2 protein.
Length = 659
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 435 EWAPGVTPKPDRVT 448
>AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing
protein 4 protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 390 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 448
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 449 EWAPGVTPKPDRVT 462
>AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens
cDNA FLJ39973 fis, clone SPLEN2028365, moderately
similar to Mus musculus ras activator RasGRP (Rasgrp)
mRNA. ).
Length = 202
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 100 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 158
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 159 EWAPGVTPKPDRVT 172
>AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide
releasing protein 4 protein.
Length = 673
Score = 31.9 bits (69), Expect = 2.4
Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%)
Frame = -3
Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363
VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L +
Sbjct: 390 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 448
Query: 362 QWYPQA*P-PTGIT 324
+W P P P +T
Sbjct: 449 EWAPGVTPKPDRVT 462
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,973,518
Number of Sequences: 237096
Number of extensions: 3116090
Number of successful extensions: 10032
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 9447
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10011
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8623170556
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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