BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30794 (730 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 prot... 130 7e-30 CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. 130 7e-30 BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 pr... 130 7e-30 AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 pr... 122 2e-27 BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. 55 3e-07 BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein. 32 2.4 BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein. 32 2.4 AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing pr... 32 2.4 AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing pr... 32 2.4 AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens ... 32 2.4 AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide relea... 32 2.4 >Z28407-1|CAA82248.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113 >CR457046-1|CAG33327.1| 257|Homo sapiens RPL8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113 >BT007379-1|AAP36043.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113 >BC093064-1|AAH93064.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113 >BC013104-1|AAH13104.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113 >BC012197-1|AAH12197.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNVGNVLPVGTMPEGTIV 113 >BC000077-1|AAH00077.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113 >AB061821-1|BAB79459.1| 257|Homo sapiens ribosomal protein L8 protein. Length = 257 Score = 130 bits (313), Expect = 7e-30 Identities = 66/114 (57%), Positives = 75/114 (65%) Frame = +2 Query: 23 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202 MGRVIR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA Sbjct: 1 MGRVIRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAK 60 Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 V FRDPY+FK K L + +H MPEGTIV Sbjct: 61 VVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 113 >AB007168-1|BAA25829.1| 130|Homo sapiens ribosomal protein L8 protein. Length = 130 Score = 122 bits (293), Expect = 2e-27 Identities = 62/110 (56%), Positives = 71/110 (64%) Frame = +2 Query: 35 IRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFR 214 IR QRKGAGSVF +H K RKGA +LR++D+AERHGYIKG+VKDIIHDPGRGAPLA V FR Sbjct: 1 IRGQRKGAGSVFRAHVKHRKGAARLRAVDFAERHGYIKGIVKDIIHDPGRGAPLAKVVFR 60 Query: 215 DPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIV 364 DPY+FK K L + +H MPEGTIV Sbjct: 61 DPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVGTMPEGTIV 109 >BC000047-1|AAH00047.2| 211|Homo sapiens RPL8 protein protein. Length = 211 Score = 54.8 bits (126), Expect = 3e-07 Identities = 31/68 (45%), Positives = 34/68 (50%) Frame = +2 Query: 161 DIIHDPGRGAPLAVVHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXX 340 DIIHDPGRGAPLA V FRDPY+FK K L + +H Sbjct: 1 DIIHDPGRGAPLAKVVFRDPYRFK-KRTELFIAAEGIHTGQFVYCGKKAQLNIGNVLPVG 59 Query: 341 AMPEGTIV 364 MPEGTIV Sbjct: 60 TMPEGTIV 67 >BC150202-1|AAI50203.1| 659|Homo sapiens RASGRP4 protein protein. Length = 659 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 435 EWAPGVTPKPDRVT 448 >BC146669-1|AAI46670.1| 659|Homo sapiens RASGRP4 protein protein. Length = 659 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 435 EWAPGVTPKPDRVT 448 >AY048121-1|AAK85703.1| 659|Homo sapiens RAS guanyl releasing protein 4 variant 2 protein. Length = 659 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 376 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 434 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 435 EWAPGVTPKPDRVT 448 >AY048119-1|AAK85701.1| 673|Homo sapiens RAS guanyl releasing protein 4 protein. Length = 673 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 390 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 448 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 449 EWAPGVTPKPDRVT 462 >AK097292-1|BAC04992.1| 202|Homo sapiens protein ( Homo sapiens cDNA FLJ39973 fis, clone SPLEN2028365, moderately similar to Mus musculus ras activator RasGRP (Rasgrp) mRNA. ). Length = 202 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 100 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 158 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 159 EWAPGVTPKPDRVT 172 >AF448437-1|AAL87858.1| 673|Homo sapiens guanyl nucleotide releasing protein 4 protein. Length = 673 Score = 31.9 bits (69), Expect = 2.4 Identities = 27/74 (36%), Positives = 36/74 (48%), Gaps = 4/74 (5%) Frame = -3 Query: 533 VALNGQKP-FGSRTVAFTLVTLSHPGIVVPITVGE-SFPRRPRCPDE-PLSPIFSSRLXL 363 VAL GQ P + L+TLS + E S+ R PRCP P SP F++ L + Sbjct: 390 VALQGQHPPCSANEDLLHLLTLSLDLFYTEDEIYELSYAREPRCPKSLPPSP-FNAPLVV 448 Query: 362 QWYPQA*P-PTGIT 324 +W P P P +T Sbjct: 449 EWAPGVTPKPDRVT 462 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 124,973,518 Number of Sequences: 237096 Number of extensions: 3116090 Number of successful extensions: 10032 Number of sequences better than 10.0: 16 Number of HSP's better than 10.0 without gapping: 9447 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 10011 length of database: 76,859,062 effective HSP length: 88 effective length of database: 55,994,614 effective search space used: 8623170556 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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