Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30794
         (730 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p pro...   138   7e-33
AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p pro...   138   7e-33
AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal pr...   138   7e-33
AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,...   138   7e-33
AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,...   138   7e-33
BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p pro...    62   1e-09

>BT014913-1|AAT47764.1|  256|Drosophila melanogaster RH21963p
           protein.
          Length = 256

 Score =  138 bits (334), Expect = 7e-33
 Identities = 69/117 (58%), Positives = 81/117 (69%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
           VHFRDPY++K ++  L  +   +H                       MPEGTI+ ++
Sbjct: 61  VHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNL 116



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 76  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 124


>AY071342-1|AAL48964.1|  256|Drosophila melanogaster RE37829p
           protein.
          Length = 256

 Score =  138 bits (334), Expect = 7e-33
 Identities = 69/117 (58%), Positives = 81/117 (69%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
           VHFRDPY++K ++  L  +   +H                       MPEGTI+ ++
Sbjct: 61  VHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNL 116



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 76  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 124


>AF098520-1|AAF06828.1|  256|Drosophila melanogaster ribosomal
           protein L8 protein.
          Length = 256

 Score =  138 bits (334), Expect = 7e-33
 Identities = 69/117 (58%), Positives = 81/117 (69%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
           VHFRDPY++K ++  L  +   +H                       MPEGTI+ ++
Sbjct: 61  VHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNL 116



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 76  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 124


>AE014296-477|AAF47660.1|  256|Drosophila melanogaster CG1263-PB,
           isoform B protein.
          Length = 256

 Score =  138 bits (334), Expect = 7e-33
 Identities = 69/117 (58%), Positives = 81/117 (69%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
           VHFRDPY++K ++  L  +   +H                       MPEGTI+ ++
Sbjct: 61  VHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNL 116



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 76  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 124


>AE014296-476|AAF47659.1|  256|Drosophila melanogaster CG1263-PA,
           isoform A protein.
          Length = 256

 Score =  138 bits (334), Expect = 7e-33
 Identities = 69/117 (58%), Positives = 81/117 (69%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGRVIRAQRKGAGSVF +H KKRKGA KLRSLD+AER GYI+GVVKDIIHDPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFKAHVKKRKGAAKLRSLDFAERSGYIRGVVKDIIHDPGRGAPLAV 60

Query: 203 VHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXXXAMPEGTIVXSI 373
           VHFRDPY++K ++  L  +   +H                       MPEGTI+ ++
Sbjct: 61  VHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTIICNL 116



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 76  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 124


>BT022891-1|AAY55307.1|  579|Drosophila melanogaster IP12501p
           protein.
          Length = 579

 Score = 61.7 bits (143), Expect = 1e-09
 Identities = 31/72 (43%), Positives = 40/72 (55%)
 Frame = +2

Query: 158 KDIIHDPGRGAPLAVVHFRDPYKFKTKEGALSCSRRALHRPICXXXXXXXXXXXXXXXXX 337
           KDIIHDPGRGAPLAVVHFRDPY++K ++  L  +   +H                     
Sbjct: 1   KDIIHDPGRGAPLAVVHFRDPYRYKIRK-ELFIAPEGMHTGQFVYCGRKATLQIGNVMPL 59

Query: 338 XAMPEGTIVXSI 373
             MPEGTI+ ++
Sbjct: 60  SQMPEGTIICNL 71



 Score = 40.3 bits (90), Expect = 0.003
 Identities = 22/50 (44%), Positives = 27/50 (54%)
 Frame = +1

Query: 250 FMLPKGSTQANLFIVERKQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           F+ P+G          RK TL++GNVMP+     G     NLEEK GDRG
Sbjct: 31  FIAPEGMHTGQFVYCGRKATLQIGNVMPLSQMPEGTII-CNLEEKTGDRG 79


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 37,046,798
Number of Sequences: 53049
Number of extensions: 876782
Number of successful extensions: 2156
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2144
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3273062859
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)