Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30794
         (730 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical pr...   128   5e-30
Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical p...    31   0.84 
AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain famil...    30   1.5  
Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical pr...    29   4.5  
Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical p...    28   5.9  
Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical pr...    28   5.9  
Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical pr...    28   7.9  
Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical pr...    28   7.9  
AC024809-1|AAF59542.4|  519|Caenorhabditis elegans Hypothetical ...    28   7.9  

>Z81453-1|CAB03792.1|  260|Caenorhabditis elegans Hypothetical
           protein B0250.1 protein.
          Length = 260

 Score =  128 bits (308), Expect = 5e-30
 Identities = 57/71 (80%), Positives = 62/71 (87%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 202
           MGR IR QRKGAG +F SH K RKGA KLR LDYAERHGYIKG+VKDIIHDPGRGAPLA+
Sbjct: 1   MGRRIRIQRKGAGGIFKSHNKHRKGASKLRPLDYAERHGYIKGLVKDIIHDPGRGAPLAI 60

Query: 203 VHFRDPYKFKT 235
           + FRDPYK+KT
Sbjct: 61  IAFRDPYKYKT 71



 Score = 31.5 bits (68), Expect = 0.64
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +3

Query: 255 APEGLYTGQFVYCGKKA 305
           A EG++TGQF++CG KA
Sbjct: 78  AAEGMHTGQFIHCGAKA 94



 Score = 29.5 bits (63), Expect = 2.6
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +1

Query: 301 KQTLEVGNVMPVGGYA*GYHCNXNLEEKMGDRG 399
           K  +++GN++PVG    G     N+E K GDRG
Sbjct: 93  KAQIQIGNIVPVGTLPEGTTI-CNVENKSGDRG 124


>Z99281-24|CAE18027.1|  155|Caenorhabditis elegans Hypothetical
           protein Y57G11C.44 protein.
          Length = 155

 Score = 31.1 bits (67), Expect = 0.84
 Identities = 18/63 (28%), Positives = 31/63 (49%)
 Frame = +2

Query: 71  VSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAVVHFRDPYKFKTKEGAL 250
           +S  ++RK +     LD+++  G  K ++KDI +D  +  P+    +    K    E  L
Sbjct: 1   MSEVRQRKSSIIDSDLDFSDSDGEFKEIIKDIENDQWKDKPVDETRW-SKTKSAVHEWGL 59

Query: 251 SCS 259
           SCS
Sbjct: 60  SCS 62


>AC024763-6|AAO12403.1|  603|Caenorhabditis elegans Calpain family
           protein 4, isoform b protein.
          Length = 603

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = -2

Query: 450 SNHSWRKFSQKATLPRRTSITHFLFKIXI 364
           S HSWR   Q   LP+  SI HFL    I
Sbjct: 573 SKHSWRLQQQPIYLPQEPSILHFLHSTTI 601


>Z81555-7|CAB04518.1|  561|Caenorhabditis elegans Hypothetical
           protein F58E10.3a protein.
          Length = 561

 Score = 28.7 bits (61), Expect = 4.5
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +2

Query: 23  MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAER 133
           +GR  R+ +KG    F +HT   K    L+ LD A++
Sbjct: 464 IGRTGRSDKKGTAYTFFTHTNASKAKDLLKVLDEAKQ 500


>Z81589-11|CAI58924.1|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 134 HGYIKGVVKDIIHDPGRGAPLAVVHFR 214
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81555-8|CAB04512.2|  330|Caenorhabditis elegans Hypothetical
           protein F58E10.6 protein.
          Length = 330

 Score = 28.3 bits (60), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 134 HGYIKGVVKDIIHDPGRGAPLAVVHFR 214
           HG +  +V  I+H P R + LA +HF+
Sbjct: 285 HGVLSTIVMLIVHTPHRKSILATLHFK 311


>Z81592-1|CAB04725.1|  695|Caenorhabditis elegans Hypothetical
           protein T16G1.1 protein.
          Length = 695

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 14/58 (24%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
 Frame = -3

Query: 515 KPFGSRTVAFTLVTLSHPGIVVPITVGESFPRRPRC--PDEPLSPIFSSRLXLQWYPQ 348
           KP  +++    ++T + P +++  T+  +  RRP+C  PD+ +   + +RL   ++ Q
Sbjct: 170 KPRKTKSRKVPIITTTEPPMLITTTIKSAPSRRPQCNDPDKTVLIDYGNRLRDCYFTQ 227


>Z72507-8|CAA96632.1| 1101|Caenorhabditis elegans Hypothetical
           protein F17C11.10 protein.
          Length = 1101

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 15/45 (33%), Positives = 22/45 (48%)
 Frame = -3

Query: 548 EPMPSVALNGQKPFGSRTVAFTLVTLSHPGIVVPITVGESFPRRP 414
           E +  +A + Q        A+T+  LS PG+ +PI  G S  R P
Sbjct: 679 EQLDWIAYSNQGKLAVMDSAYTVHVLSAPGLWIPIFQGSSALRAP 723


>AC024809-1|AAF59542.4|  519|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.7a protein.
          Length = 519

 Score = 27.9 bits (59), Expect = 7.9
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = +3

Query: 633 GSKRKLAGPIMLTWVFAPWKP 695
           GS  +  GP++++W+F  W P
Sbjct: 449 GSFARTIGPLLVSWIFQEWGP 469


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,463,117
Number of Sequences: 27780
Number of extensions: 437626
Number of successful extensions: 1020
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 975
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1718929214
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)