Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30791
(873 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyc... 85 2e-17
SPBC3F6.01c |||serine/threonine protein phosphatase |Schizosacch... 69 9e-13
SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces... 62 1e-10
SPBC543.02c |||DNAJ/TPR domain protein DNAJC7 family|Schizosacch... 60 4e-10
SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyc... 46 5e-06
SPAC2F3.02 |||ER protein translocation subcomplex subunit|Schizo... 41 2e-04
SPAC6B12.12 |tom70||mitochondrial TOM complex subunit Tom70|Schi... 41 2e-04
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 37 0.004
SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1... 32 0.093
SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr 2|||... 29 1.1
SPBC27B12.12c |||CorA family magnesium ion transporter |Schizosa... 25 2.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 2.6
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 27 3.5
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 8.1
SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces pomb... 26 8.1
SPBC577.15c |||NASP family histone binding protein|Schizosacchar... 26 8.1
>SPAC1142.02c ||SPAC17G6.19c|TPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 317
Score = 84.6 bits (200), Expect = 2e-17
Identities = 43/86 (50%), Positives = 57/86 (66%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 484
NK EAE+LK EGN + A+ Y +AL+ YT+AIEIDP + VYY NRAAA+ +L E AV
Sbjct: 79 NKEEAEKLKLEGNNAIAAKDYQKALDLYTKAIEIDPTSPVYYSNRAAAYNQLGQFENAVE 138
Query: 485 DCTNSTRPQPDYSKAYGRLGLALTAL 562
D P +++A+GRLG A +L
Sbjct: 139 DALTCLSLDPHHARAFGRLGRAKLSL 164
Score = 43.2 bits (97), Expect = 5e-05
Identities = 17/43 (39%), Positives = 31/43 (72%)
Frame = +3
Query: 120 VAASIVNFLKQQLDGDSLSPDSRESVEVGVQCIETAFELTTED 248
V A+I+++LKQ + S+S + +ES+EV QCI+ +F++ E+
Sbjct: 6 VTAAIIDYLKQAITTGSISEEEKESLEVAAQCIQDSFKIKPEE 48
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/26 (38%), Positives = 17/26 (65%)
Frame = +3
Query: 684 DLSGLLRNPALINMATEMLTNPNMQN 761
DL L+ NPA++NMA ++ + + N
Sbjct: 233 DLGSLMNNPAVMNMARNLMQSGALNN 258
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 684 DLSGLLRNPALINMATEMLTNPNMQN 761
DLS L NP L N+A + N N N
Sbjct: 280 DLSSLANNPQLQNLARNFMNNNNNGN 305
>SPBC3F6.01c |||serine/threonine protein phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 473
Score = 68.9 bits (161), Expect = 9e-13
Identities = 33/83 (39%), Positives = 50/83 (60%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 493
EA LKNE N+ +K +A++ YT+AIE+D NA+ Y NR+ AH + D A++D +
Sbjct: 4 EALELKNEANKFLKEGHIVQAIDLYTKAIELDSTNAILYSNRSLAHLKSEDYGLAINDAS 63
Query: 494 NSTRPQPDYSKAYGRLGLALTAL 562
+ P+Y+KAY R A A+
Sbjct: 64 KAIECDPEYAKAYFRRATAHIAI 86
Score = 40.3 bits (90), Expect = 3e-04
Identities = 19/46 (41%), Positives = 26/46 (56%)
Frame = +2
Query: 350 MKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSD 487
+K+E Y A+ ++AIE DP A Y RA AH + P+ AV D
Sbjct: 50 LKSEDYGLAINDASKAIECDPEYAKAYFRRATAHIAIFQPKEAVGD 95
>SPCC645.14c |sti1||chaperone activator Sti1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 591
Score = 62.1 bits (144), Expect = 1e-10
Identities = 31/82 (37%), Positives = 46/82 (56%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTN 496
AE LK +GN + Y A++ +T+AI +D RN + Y NR+A + D A+ D T
Sbjct: 2 AEELKAKGNAAFSKKDYKTAIDYFTQAIGLDERNHILYSNRSACYASEKDYADALKDATK 61
Query: 497 STRPQPDYSKAYGRLGLALTAL 562
T +PD++K + R G AL L
Sbjct: 62 CTELKPDWAKGWSRKGAALHGL 83
Score = 54.8 bits (126), Expect = 2e-08
Identities = 27/84 (32%), Positives = 47/84 (55%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 493
+AE + +GNEL K+ + A+++YT + P + + NRAAA+ ++ P + DC
Sbjct: 398 KAEESRVKGNELFKSGDFANAIKEYTEMTKRAPSDPRGFGNRAAAYLKVMAPAECIRDCN 457
Query: 494 NSTRPQPDYSKAYGRLGLALTALE 565
+ P+++KAY R AL L+
Sbjct: 458 KAIELDPNFAKAYVRKAQALFMLK 481
Score = 34.3 bits (75), Expect = 0.023
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 7/88 (7%)
Frame = +2
Query: 302 ANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAV 481
A K +A++ K GNE K + A+E+Y +A + ++ Y N AAA+F + +
Sbjct: 260 ALKKKADQEKQIGNENYKKRNFPVAIEQYKKAWD-TYKDITYLNNLAAAYFEADQLDDCI 318
Query: 482 SDCTNSTRP----QPDY---SKAYGRLG 544
C ++ + D+ +KA GRLG
Sbjct: 319 KTCEDAIEQGRELRADFKLIAKALGRLG 346
Score = 30.3 bits (65), Expect = 0.37
Identities = 19/68 (27%), Positives = 29/68 (42%), Gaps = 3/68 (4%)
Frame = +2
Query: 332 NEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNST--- 502
N +K E + +AIE+DP A Y +A A F L D + C ++
Sbjct: 438 NRAAAYLKVMAPAECIRDCNKAIELDPNFAKAYVRKAQALFMLKDYNKCIDACNEASEVD 497
Query: 503 RPQPDYSK 526
R +P+ K
Sbjct: 498 RREPNTGK 505
>SPBC543.02c |||DNAJ/TPR domain protein DNAJC7
family|Schizosaccharomyces pombe|chr 2|||Manual
Length = 476
Score = 60.1 bits (139), Expect = 4e-10
Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Frame = +2
Query: 320 ERLKNEGNELMKAERYNEALEKYTRAIEIDPRN----AVYYCNRAAAHFRLCDPEAAVSD 487
E KN+GN+L + Y +A EKY+ A++IDP N A Y NRA RL PE A+SD
Sbjct: 224 ENTKNQGNDLFRQGNYQDAYEKYSEALQIDPDNKETVAKLYMNRATVLLRLKRPEEALSD 283
Query: 488 CTNSTRPQPDYSKAYGRLGLALTALER 568
N+ Y K A ALE+
Sbjct: 284 SDNALAIDSSYLKGLKVRAKAHEALEK 310
Score = 58.8 bits (136), Expect = 9e-10
Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEI--DPRNAVYYCNRAAAHFRLCDPEAAVSDC 490
AE+ K GN K ++Y EA++ YT AI++ D A+YY NRAA + ++ + E A+ D
Sbjct: 23 AEKQKAIGNAFYKEKKYAEAIKAYTEAIDLGSDSALAIYYSNRAATYMQIGEFELALCDA 82
Query: 491 TNSTRPQPDYSKAYGRLGLALTAL 562
S R +PD K R+ A L
Sbjct: 83 KQSDRIKPDVPKTQSRIRQAYEGL 106
>SPAC17A2.04c |||HSP chaperone complex subunit |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 358
Score = 46.4 bits (105), Expect = 5e-06
Identities = 30/92 (32%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAI-----EIDPRNAVYYCNRAAAHFRLCDPEAAV 481
A+ + GNE ++RY +A E YT+A+ + D A Y NRAA + + +
Sbjct: 64 AQNFREHGNECFASKRYKDAEEFYTKALAQKCGDKDIEIACY-SNRAACNLLFENYRQVL 122
Query: 482 SDCTNSTRPQPDYSKAYGRLGLALTALERHCE 577
+DC + ++KAY R AL AL+R+ E
Sbjct: 123 NDCAQVLQRDSTHAKAYYRSAKALVALKRYDE 154
>SPAC2F3.02 |||ER protein translocation subcomplex
subunit|Schizosaccharomyces pombe|chr 1|||Manual
Length = 192
Score = 41.1 bits (92), Expect = 2e-04
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Frame = +2
Query: 302 ANKAEAERLKNEGNELMKAERYNEALEKYTRAIEI-------DP------RNAVYYCNRA 442
A + ++K NE K ++Y EA + Y A+++ +P +V CNRA
Sbjct: 57 ALSTQVNKMKQTANEAFKRKKYEEAKKLYGLALQLALNRCTWEPSILTREEASVMLCNRA 116
Query: 443 AAHFRLCDPEAAVSDCTNSTRPQPDYSKAYGRLGLALTALER 568
AA L A++D + + + +Y K Y R AL A+ R
Sbjct: 117 AAEIALSQFPEALADANAALKIRNNYGKCYYRKAKALEAMHR 158
>SPAC6B12.12 |tom70||mitochondrial TOM complex subunit
Tom70|Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 41.1 bits (92), Expect = 2e-04
Identities = 24/82 (29%), Positives = 38/82 (46%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTN 496
A LK GN+ + Y A++ YT+AI + +++ NRAA + + D E + D +
Sbjct: 151 AAELKTLGNKAYGQKEYANAIDYYTQAITCS-HDPIFFSNRAACYAAIGDFEQVIKDTSE 209
Query: 497 STRPQPDYSKAYGRLGLALTAL 562
+ Y KA R A L
Sbjct: 210 ALSLDSSYVKALNRRSAAYEQL 231
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 36.7 bits (81), Expect = 0.004
Identities = 19/81 (23%), Positives = 41/81 (50%)
Frame = +2
Query: 302 ANKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAV 481
A+ +A+ G + ++YN+A E Y +A+ D RN ++C+ ++++ + A+
Sbjct: 579 ADDTDAQSWYLIGRCYVAQQKYNKAYEAYQQAVYRDGRNPTFWCSIGVLYYQINQYQDAL 638
Query: 482 SDCTNSTRPQPDYSKAYGRLG 544
+ + R P S+ + LG
Sbjct: 639 DAYSRAIRLNPYISEVWYDLG 659
>SPAC27D7.14c |tpr1|SPAC637.02c|RNA polymerase II associated Paf1
complex subunit Tpr1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1039
Score = 32.3 bits (70), Expect = 0.093
Identities = 13/38 (34%), Positives = 25/38 (65%)
Frame = +2
Query: 308 KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNA 421
+A R+ N+ +L + + Y +A++ Y +AI+ DP+NA
Sbjct: 631 QAREFRVHNDREKLKRQKLYIKAIQSYDQAIKFDPKNA 668
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/43 (30%), Positives = 20/43 (46%)
Frame = +2
Query: 338 GNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCD 466
G E + E++ T A+E +P N N A F+LC+
Sbjct: 751 GRESKNVDYLKESVRYATLALEKNPENPSLLFNVAFVQFQLCE 793
>SPBPJ4664.02 |||glycoprotein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 3971
Score = 28.7 bits (61), Expect = 1.1
Identities = 32/119 (26%), Positives = 53/119 (44%), Gaps = 6/119 (5%)
Frame = +3
Query: 216 IETAFELTTEDAAEAWT-YCSLSVSDWGRPLTRLKPNDSRTKATSS*KLSVTTKRLKST- 389
+ ++ +T+ A T S SV + P+T +S T TSS L+ +T ST
Sbjct: 3378 VNSSTPITSSTALNTSTPITSSSVLNSSTPITSSTVVNSSTPITSSTALNTSTPITSSTV 3437
Query: 390 ---RAP*RSTQETRSTTAIARLRISGCATPRQR*ATVPTALAL-SLTIARRTDALGSRS 554
P S+ S+TAIA I +TP + + ++ + S T+ + +GS S
Sbjct: 3438 VNSSTPITSSSVLNSSTAIASSSILNSSTPITSSSVLNSSTPISSSTVITSSVVIGSSS 3496
>SPBC27B12.12c |||CorA family magnesium ion transporter
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.0 bits (52), Expect(2) = 2.1
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = +2
Query: 629 PTEKTSNFADQTFSTAP 679
PT+ T+ F+D+TF+ P
Sbjct: 310 PTKSTAQFSDETFTVQP 326
Score = 21.0 bits (42), Expect(2) = 2.1
Identities = 7/16 (43%), Positives = 11/16 (68%)
Frame = +2
Query: 473 AAVSDCTNSTRPQPDY 520
+A DC ++T P+P Y
Sbjct: 285 SAAVDCPHTTIPKPPY 300
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.5 bits (58), Expect = 2.6
Identities = 20/76 (26%), Positives = 32/76 (42%)
Frame = +3
Query: 486 TVPTALALSLTIARRTDALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPRKPPTSLTKP 665
+VP+ ALS ++ + + SR PP T R +P P P+ +PP + +
Sbjct: 1039 SVPSPSALSPSVTPQLPPVSSRLPPVSAT-RPQIPQPPPVSTALPSSSAVSRPPIATSAG 1097
Query: 666 LAQRPNDLSGLLRNPA 713
+ S L PA
Sbjct: 1098 RSSTAASTSAPLTYPA 1113
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 27.1 bits (57), Expect = 3.5
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 591 TPAPLQLRP*ERVLPRKPPT 650
T AP Q+R ++++PRKP T
Sbjct: 335 TSAPFQVRDIQKIVPRKPAT 354
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/31 (32%), Positives = 17/31 (54%)
Frame = +3
Query: 663 PLAQRPNDLSGLLRNPALINMATEMLTNPNM 755
P+ +L+ +L NP + + EM +NP M
Sbjct: 136 PVPPSTEELANMLSNPMVQSSINEMFSNPQM 166
>SPCC1919.05 |||TPR repeat protein Ski3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1389
Score = 25.8 bits (54), Expect = 8.1
Identities = 15/45 (33%), Positives = 23/45 (51%)
Frame = +2
Query: 413 RNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQPDYSKAYGRLGL 547
R +Y NR + ++ E + S +S R P+Y+ AY LGL
Sbjct: 543 RYGIYILNRKSENYL----EDSFSAFVSSLRKDPNYAPAYTSLGL 583
>SPBC577.15c |||NASP family histone binding
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 396
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/36 (33%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Frame = +2
Query: 296 PPANKAEA-ERLKNEGNELMKAERYNEALEKYTRAI 400
P ++ + A E+L +GN + Y EA++KY +A+
Sbjct: 24 PSSSDSRAIEQLVTQGNMAYAQKNYEEAVDKYGQAL 59
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,066,605
Number of Sequences: 5004
Number of extensions: 56516
Number of successful extensions: 215
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 189
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 214
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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