Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30791
(873 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.) 71 9e-13
SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.) 63 3e-10
SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.) 59 5e-09
SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0) 58 1e-08
SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 5e-08
SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32) 56 5e-08
SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 4e-07
SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15) 50 2e-06
SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 3e-06
SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14) 48 1e-05
SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17) 45 7e-05
SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 9e-05
SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15) 44 1e-04
SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 4e-04
SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10) 42 5e-04
SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34) 42 5e-04
SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10) 42 7e-04
SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30) 42 9e-04
SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32) 41 0.001
SB_42258| Best HMM Match : TPR_2 (HMM E-Value=0.006) 38 0.011
SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.019
SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06) 36 0.057
SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069) 36 0.057
SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021) 35 0.100
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36) 33 0.23
SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41) 33 0.30
SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.53
SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12) 32 0.53
SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06) 32 0.70
SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09) 31 0.93
SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37) 30 2.1
SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.8
SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23) 30 2.8
SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26) 29 3.8
SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.0
SB_57007| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20) 29 6.6
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_40786| Best HMM Match : WSC (HMM E-Value=0.44) 29 6.6
SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.6
SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0) 28 8.7
SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0) 28 8.7
SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10) 28 8.7
SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.7
SB_22798| Best HMM Match : Cadherin (HMM E-Value=0) 28 8.7
SB_15665| Best HMM Match : Keratin_B2 (HMM E-Value=0.0098) 28 8.7
>SB_22290| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 485
Score = 71.3 bits (167), Expect = 9e-13
Identities = 35/88 (39%), Positives = 52/88 (59%)
Frame = +2
Query: 308 KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSD 487
KA+A +LK++GN + A +A+E YT AI +DP N V+Y NR+AA +L A+ D
Sbjct: 6 KAKAAKLKDQGNAALSAGDTQKAIEFYTEAILLDPANHVFYSNRSAAFAKLSKYNEALED 65
Query: 488 CTNSTRPQPDYSKAYGRLGLALTALERH 571
+PD+ K Y RLG A + L+ +
Sbjct: 66 ARKCVEIKPDWGKGYSRLGTAYSFLKMY 93
Score = 39.9 bits (89), Expect = 0.003
Identities = 21/86 (24%), Positives = 38/86 (44%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 484
N+ +A K GN K + ++ A + + A E++P N +Y N AAA F + E +
Sbjct: 226 NEKKAMEEKELGNAAYKKKDFDTAHKHFNNAKELNPDNMTFYTNNAAAFFEEGNYEECIK 285
Query: 485 DCTNSTRPQPDYSKAYGRLGLALTAL 562
+C + + +G A +
Sbjct: 286 ECLEAVEVGRSNRAEFALIGKAFARI 311
Score = 37.5 bits (83), Expect = 0.014
Identities = 20/59 (33%), Positives = 29/59 (49%)
Frame = +2
Query: 329 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTR 505
K +GNE K + A + YT AI+ +P +A Y NRAA +L A+ + R
Sbjct: 369 KEKGNEYFKKGDFPSAQKHYTEAIKRNPEDAKLYSNRAATFQKLAAFNLALEEAKEGLR 427
>SB_42049| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 231
Score = 62.9 bits (146), Expect = 3e-10
Identities = 26/45 (57%), Positives = 36/45 (80%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNR 439
++ +AE LKNEGN+LMK E++ EA+ Y+RAIE+D N+VY CNR
Sbjct: 87 DRQKAEELKNEGNQLMKEEKFQEAINSYSRAIELDNTNSVYPCNR 131
Score = 46.0 bits (104), Expect = 4e-05
Identities = 23/53 (43%), Positives = 33/53 (62%)
Frame = +3
Query: 99 MSNEIKIVAASIVNFLKQQLDGDSLSPDSRESVEVGVQCIETAFELTTEDAAE 257
MSN ++ A I+ L QQLD ++S DS ES+EV +QC+E F + D A+
Sbjct: 1 MSNSERLSFA-IIEHLTQQLDSGTVSGDSAESLEVAIQCLEQVFNINRGDEAQ 52
>SB_4485| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1769
Score = 58.8 bits (136), Expect = 5e-09
Identities = 28/85 (32%), Positives = 47/85 (55%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 493
+A + +GN+ +K E + EAL+ YT+ IE+ + + NRA H +L P+ A++DC
Sbjct: 863 KANDFREKGNDAVKREEFQEALDWYTKGIELTKTDHRLFSNRALCHLKLNKPKEALADCE 922
Query: 494 NSTRPQPDYSKAYGRLGLALTALER 568
+ + + + KA R AL L R
Sbjct: 923 SCLKLEEHFGKALQRKAWALHELSR 947
>SB_8404| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 1981
Score = 57.6 bits (133), Expect = 1e-08
Identities = 32/86 (37%), Positives = 48/86 (55%)
Frame = +2
Query: 320 ERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNS 499
E+ K G+ K + + +A+E Y+ AI++DP N V Y NR+AA R E A+ D +
Sbjct: 24 EKAKWAGDACSKGD-FQKAVELYSEAIKLDPNNHVLYGNRSAACIRTWQLEQALEDGKKA 82
Query: 500 TRPQPDYSKAYGRLGLALTALERHCE 577
P + KA+ R G+AL + RH E
Sbjct: 83 AELNPLWPKAHYRQGVALQCMGRHAE 108
>SB_59454| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 285
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 329 KNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDPEAAVSDCTN 496
K EGN+ Y +A E YT A+EIDP+ NA Y NRA +L + A+ DCT
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 497 STRPQPDYSKAY 532
+ Y+KAY
Sbjct: 97 AMNLDHTYTKAY 108
>SB_42340| Best HMM Match : DnaJ (HMM E-Value=3.2e-32)
Length = 264
Score = 55.6 bits (128), Expect = 5e-08
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 4/72 (5%)
Frame = +2
Query: 329 KNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDPEAAVSDCTN 496
K EGN+ Y +A E YT A+EIDP+ NA Y NRA +L + A+ DCT
Sbjct: 37 KQEGNDAFTGGHYQKAYELYTEALEIDPKNKSTNAKLYYNRAVVGSKLGKNDQAIEDCTQ 96
Query: 497 STRPQPDYSKAY 532
+ Y+KAY
Sbjct: 97 AMNLDHTYTKAY 108
>SB_51830| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 582
Score = 52.8 bits (121), Expect = 4e-07
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 5/98 (5%)
Frame = +2
Query: 299 PANKAEAERLKNEGNELMKAERYNEALEKYTRAIEI-DPRN----AVYYCNRAAAHFRLC 463
P+ +A+ +LK GN+ K +Y +A++ YT AIE+ P N + +Y NRAAA+ ++
Sbjct: 137 PSEQAQVAKLK--GNKYFKGCKYEQAIKCYTEAIELCPPENKQDLSTFYQNRAAAYEQMN 194
Query: 464 DPEAAVSDCTNSTRPQPDYSKAYGRLGLALTALERHCE 577
E V + T + Y+KA R AL LER E
Sbjct: 195 QFENVVEEATKALELNSKYTKALMRRARALEKLERKQE 232
>SB_50714| Best HMM Match : TPR_2 (HMM E-Value=2.9e-15)
Length = 458
Score = 50.0 bits (114), Expect = 2e-06
Identities = 26/84 (30%), Positives = 45/84 (53%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 493
++ ++ GNE+ Y A+E +T+AI++D R+ ++ NR+ RL E A+ D
Sbjct: 268 QSRQIAVRGNEMANLGNYQAAIELFTQAIKLDARDFRFFGNRSYCFDRLGQFEKALQDAD 327
Query: 494 NSTRPQPDYSKAYGRLGLALTALE 565
+ PD+ K + R G AL L+
Sbjct: 328 VAISLAPDWPKGFFRRGRALAGLK 351
>SB_6453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 784
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/90 (34%), Positives = 46/90 (51%), Gaps = 3/90 (3%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLC---DPEAAVSD 487
A LK GNE +++ A+ Y A+ + P +AV Y NRAAA + D AA+ D
Sbjct: 334 ALHLKTIGNEAFCKQQFLTAVNMYNEALNLAPNSAVLYANRAAAFIKRSWEGDVYAALRD 393
Query: 488 CTNSTRPQPDYSKAYGRLGLALTALERHCE 577
C + P+++KA+ R L L R C+
Sbjct: 394 CHKALTLDPNHTKAHFRQARCLYEL-RWCQ 422
>SB_42515| Best HMM Match : TPR_2 (HMM E-Value=2e-14)
Length = 1104
Score = 48.0 bits (109), Expect = 1e-05
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYY--------CNRAAAHFRLCDPE 472
A R K+EG L K RY EA+EKY++AI++ ++ ++ NRA+ R+ D
Sbjct: 415 AVRAKDEGMRLYKIGRYAEAVEKYSQAIDVLWKDKSHFKSALASLLYNRASCLGRIGDAS 474
Query: 473 AAVSDCTNSTRPQPDYSKAY 532
V DCT+S PD KA+
Sbjct: 475 GCVKDCTSSLNLIPDSLKAH 494
Score = 38.7 bits (86), Expect = 0.006
Identities = 20/44 (45%), Positives = 28/44 (63%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAA 448
A R K++GN+ ++ Y E+L YTR+IE+ P A Y NRA A
Sbjct: 215 ANREKDKGNDAFRSGDYKESLVYYTRSIELKP-TAASYNNRAMA 257
>SB_22714| Best HMM Match : TPR_2 (HMM E-Value=1.2e-17)
Length = 455
Score = 45.2 bits (102), Expect = 7e-05
Identities = 34/98 (34%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN----------AVYYCNRAAAHF 454
N A +K EGN+ KA Y AL Y A+++ N AV Y NRAA
Sbjct: 5 NPKSAVEIKEEGNKYFKAGDYEAALSSYAAALKLYSGNEKDKEKQKEKAVIYKNRAACQL 64
Query: 455 RLCDPEAAVSDCTNSTRPQPDYSKAYGRLGLALTALER 568
+L EAA+ D T + P+ KA R A A R
Sbjct: 65 KLEKYEAAIKDATKALDIVPNDPKALFRRSQAFEATGR 102
>SB_35701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 540
Score = 44.8 bits (101), Expect = 9e-05
Identities = 28/83 (33%), Positives = 39/83 (46%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCT 493
EAE LK + N K YN A+ YT+AIE+ YY NR+ + + A++D
Sbjct: 186 EAEDLKLKANGYFKEGNYNSAITFYTQAIELKADVPAYYGNRSFCYLKTEYYGLALADAN 245
Query: 494 NSTRPQPDYSKAYGRLGLALTAL 562
+ + Y K Y R A AL
Sbjct: 246 KAIQLDRKYIKGYYRRATANMAL 268
>SB_44774| Best HMM Match : TPR_2 (HMM E-Value=6.3e-15)
Length = 206
Score = 44.4 bits (100), Expect = 1e-04
Identities = 24/74 (32%), Positives = 38/74 (51%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTN 496
AE K EGN + Y A+ Y++AIE P A +Y NR+AA+ + + + A+ D
Sbjct: 34 AEAKKAEGNREYGLKNYVSAIALYSKAIEFAPHVATFYGNRSAAYMMISNYDKALEDALL 93
Query: 497 STRPQPDYSKAYGR 538
S ++ K + R
Sbjct: 94 SIEIDNNFVKGHYR 107
>SB_42562| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 186
Score = 42.7 bits (96), Expect = 4e-04
Identities = 19/45 (42%), Positives = 29/45 (64%)
Frame = +2
Query: 308 KAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRA 442
+A A +LK +GN K ++Y EA++ YT+A+ D N +Y NRA
Sbjct: 117 EAVALQLKEKGNLAFKQQKYEEAVKLYTQALNQDRTNTAFYTNRA 161
>SB_40767| Best HMM Match : TPR_2 (HMM E-Value=3.2e-10)
Length = 452
Score = 42.3 bits (95), Expect = 5e-04
Identities = 23/81 (28%), Positives = 40/81 (49%)
Frame = +2
Query: 329 KNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRP 508
++EGN+ M ++ Y A++ Y ++I P N +C RA A L E ++ D +
Sbjct: 288 RSEGNKKMISKEYRTAIDLYNKSILASPINYFSWCQRATAFISLNKYEESLLDFEECIKL 347
Query: 509 QPDYSKAYGRLGLALTALERH 571
P + K Y GL+ L ++
Sbjct: 348 NPKWVKGYLFRGLSQLHLRQY 368
>SB_26739| Best HMM Match : TPR_2 (HMM E-Value=1e-34)
Length = 935
Score = 42.3 bits (95), Expect = 5e-04
Identities = 26/94 (27%), Positives = 47/94 (50%), Gaps = 5/94 (5%)
Frame = +2
Query: 311 AEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN-----AVYYCNRAAAHFRLCDPEA 475
+EA++ K G EL KA +Y+ E Y+ A+ + + CNR+ A + ++
Sbjct: 396 SEAKKWKERGKELFKANKYSLLDEYYSLALSYAHHSDKELVSQLLCNRSLAFLKKNFLKS 455
Query: 476 AVSDCTNSTRPQPDYSKAYGRLGLALTALERHCE 577
A++D + +P +SK + RLG L ++ E
Sbjct: 456 ALTDAKECVKTRPSWSKGHYRLGSCLAQSDQGVE 489
>SB_55147| Best HMM Match : TPR_2 (HMM E-Value=1.8e-10)
Length = 559
Score = 41.9 bits (94), Expect = 7e-04
Identities = 20/60 (33%), Positives = 33/60 (55%)
Frame = +2
Query: 371 EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQPDYSKAYGRLGLA 550
EA++ +T AI +P +A + RA+ R+ P AA+ DC + + PD ++ Y G A
Sbjct: 66 EAIKLFTDAIMKNPHSAPLFAKRASCFIRMKKPNAAIRDCDKAAQINPDSAQIYKWRGRA 125
>SB_19825| Best HMM Match : TPR_2 (HMM E-Value=4.8e-30)
Length = 592
Score = 41.5 bits (93), Expect = 9e-04
Identities = 22/76 (28%), Positives = 38/76 (50%)
Frame = +2
Query: 335 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQP 514
EG+ L K E Y +AL+ Y+ A+E+ P + R+ + +L +AA D +
Sbjct: 22 EGDVLFKQEEYQKALDSYSLALELKPTDPFCLVARSKCYLKLGKNDAAYRDAEAALEEDK 81
Query: 515 DYSKAYGRLGLALTAL 562
D++K + AL A+
Sbjct: 82 DFNKGLYQKAEALYAM 97
>SB_45140| Best HMM Match : RVT_1 (HMM E-Value=3.8e-32)
Length = 868
Score = 41.1 bits (92), Expect = 0.001
Identities = 24/82 (29%), Positives = 39/82 (47%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTN 496
+E K +GN+ +Y A+ YT AI P N + Y NRA ++ + D ++D
Sbjct: 500 SEDRKLQGNDHFNHGKYKAAISAYTLAISGAPYNHILYGNRAQSYLKSEDLREGLTDGRR 559
Query: 497 STRPQPDYSKAYGRLGLALTAL 562
+ +PD++K R A L
Sbjct: 560 AVVLKPDWTKGQFRYAQAFFEL 581
>SB_42258| Best HMM Match : TPR_2 (HMM E-Value=0.006)
Length = 154
Score = 37.9 bits (84), Expect = 0.011
Identities = 25/77 (32%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 299 PANKAEAERLKNEGNELMKAERYN----EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCD 466
PA++A RL NE E Y+ E+++ T AI +PR YY +RA A + + D
Sbjct: 24 PASQAIRSRLSIVFNEFGILEYYDRHYLESIDYLTTAISYNPRIGPYYLSRARARYMIED 83
Query: 467 PEAAVSDCTNSTRPQPD 517
+ A D +PD
Sbjct: 84 SDGAREDVLKCLYLEPD 100
>SB_49858| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 927
Score = 37.1 bits (82), Expect = 0.019
Identities = 22/79 (27%), Positives = 38/79 (48%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTN 496
A+ N GN L + + A++ Y+RAI+I+P A + N A+ H + A+
Sbjct: 398 ADAFSNMGNLLKEMQDIQGAIQCYSRAIQINPAFADAHSNLASVHKDSGNIPEAIQSYRT 457
Query: 497 STRPQPDYSKAYGRLGLAL 553
+ + +P + AY L L
Sbjct: 458 ALKLKPSFPDAYCNLAHCL 476
Score = 31.1 bits (67), Expect = 1.2
Identities = 24/76 (31%), Positives = 32/76 (42%), Gaps = 1/76 (1%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 484
N AE N GN + + +AL Y A+++ P Y N AAA D E AV
Sbjct: 111 NPMLAEAYSNLGNVFKERGQLKDALANYRHAVKLKPDFIDGYINLAAALVAAGDLEGAVH 170
Query: 485 DCTNSTRPQPD-YSKA 529
+ + P Y KA
Sbjct: 171 AYATALQYNPACYLKA 186
>SB_11364| Best HMM Match : TPR_2 (HMM E-Value=3e-06)
Length = 357
Score = 35.5 bits (78), Expect = 0.057
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN-----AVYYCNRAAAHFRLCDP 469
+ + A L+NEGN + + ALE YT++I + P ++ Y NR+A F + +
Sbjct: 63 SSSTAASLRNEGNTYFQKRQLGRALEVYTQSILVAPSTDLKVLSLAYANRSAVLFHMKEY 122
Query: 470 EAAVSD 487
E + D
Sbjct: 123 ELCLRD 128
>SB_43809| Best HMM Match : PSGP (HMM E-Value=0.069)
Length = 932
Score = 35.5 bits (78), Expect = 0.057
Identities = 31/109 (28%), Positives = 41/109 (37%)
Frame = +3
Query: 339 ATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIARLRISGCATPRQR*ATVPTALALSLT 518
ATS+ + +T S A ST + +R S PR A A + T
Sbjct: 546 ATSNSTIPRSTDAQASRAATSNSTIPRSTDAQASRPATSNATIPRSTDAQASRAATSNST 605
Query: 519 IARRTDALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPRKPPTSLTKP 665
I R TDA SR+ S T R+ A +PR T T+P
Sbjct: 606 IPRSTDAQASRAATSNSTIPRSTDAQASRPATS-NATVPRSAETQATRP 653
Score = 31.1 bits (67), Expect = 1.2
Identities = 29/112 (25%), Positives = 46/112 (41%), Gaps = 1/112 (0%)
Frame = +3
Query: 333 TKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIA-RLRISGCATPRQR*ATVPTALAL 509
++A +S ++ +++RA ++ RST A A R S PR A
Sbjct: 525 SRAATSNSTMPSSADKQASRAATSNSTIPRSTDAQASRAATSNSTIPRSTDAQASRPATS 584
Query: 510 SLTIARRTDALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPRKPPTSLTKP 665
+ TI R TDA SR+ S T R+ A + +PR ++P
Sbjct: 585 NATIPRSTDAQASRAATSNSTIPRSTDAQAS-RAATSNSTIPRSTDAQASRP 635
>SB_13361| Best HMM Match : TPR_2 (HMM E-Value=0.0021)
Length = 304
Score = 34.7 bits (76), Expect = 0.100
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 4/67 (5%)
Frame = +2
Query: 329 KNEGNELMKAERYNEALEKYTRAIEIDPR----NAVYYCNRAAAHFRLCDPEAAVSDCTN 496
K EGN K + + +A++ YT I++ + NA+ Y NRA +F L +
Sbjct: 88 KEEGNYEYKRKNFKKAIDAYTEGIKLRCQDGHVNAILYTNRATVNFSLVIQQNLCKFSLI 147
Query: 497 STRPQPD 517
+T +PD
Sbjct: 148 TTNIEPD 154
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 33.5 bits (73), Expect = 0.23
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 546 SRSPPSRDTARRALPTPAPLQLRP*ERVLPRKPPTSLTK-PLAQRP 680
SR PP +TA + P P ++RP LP PP + TK PLA P
Sbjct: 617 SRVPPQPETAPKPFPNITPPEVRP---SLPGTPPETKTKPPLAPYP 659
>SB_29438| Best HMM Match : TPR_2 (HMM E-Value=3.8e-36)
Length = 1021
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/58 (29%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Frame = +2
Query: 371 EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQPDYSKAY-GRL 541
+AL+ Y + + P+++ YC RA + EAA+SD + QP +++ GR+
Sbjct: 384 QALDVYNDVVRLRPKSSRSYCARAVCYLNSGSNEAALSDYNTALGIQPGCARSLCGRM 441
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 374 ALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQPD 517
AL Y A+ I P A C R AHF + + ++D ++ R D
Sbjct: 419 ALSDYNTALGIQPGCARSLCGRMRAHFAIGQQDKGIADLISAARAGVD 466
>SB_19342| Best HMM Match : Keratin_B2 (HMM E-Value=0.41)
Length = 1093
Score = 33.1 bits (72), Expect = 0.30
Identities = 31/115 (26%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +3
Query: 303 LTRLKPNDSRTKATSS*KLSVTTKRLKSTRAP*RSTQET---RSTTAIARLRISGCATPR 473
+T K D++++ + L + R K T P ST +ST ++ PR
Sbjct: 262 ITIPKATDTQSRPAT---LRASISRTKDTHTPKTSTPTAIIPKSTDRQSQPTPPPATIPR 318
Query: 474 QR*ATVPTALALSLTIARRTDALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPR 638
V + + TIAR +D + SR+ S T T A Q+ P E++ PR
Sbjct: 319 STDTQVSELSSSTATIARSSDTMASRTASSTATLPEVTDTQASKQVTPTEKI-PR 372
>SB_40334| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1061
Score = 32.3 bits (70), Expect = 0.53
Identities = 25/80 (31%), Positives = 34/80 (42%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 484
N EA+R + K E +N+ E Y AI + Y N A H +C+ + A
Sbjct: 398 NLKEAKRFYESSLDRSKQESHND--ESYYNAISV---TTTY--NLARLHEAMCEIDKAEQ 450
Query: 485 DCTNSTRPQPDYSKAYGRLG 544
N R P+Y Y RLG
Sbjct: 451 LYKNILREHPNYVDCYLRLG 470
>SB_44019| Best HMM Match : TPR_2 (HMM E-Value=4.9e-12)
Length = 654
Score = 32.3 bits (70), Expect = 0.53
Identities = 20/77 (25%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Frame = +2
Query: 302 ANKAEAERLKNEGNELMKAERYN--EALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEA 475
A++ E+ RL+ GN L+ + ++ E LEKY A +++PR+ + N + L +
Sbjct: 160 ASELESARLRICGNLLLNNDEFSKDEILEKYKEAEKLNPRDHLLQSNMSHVLLSLGKFQE 219
Query: 476 AVSDCTNSTRPQPDYSK 526
A+ + +P++ K
Sbjct: 220 ALDKAEQACHIRPNWPK 236
>SB_17634| Best HMM Match : TPR_2 (HMM E-Value=0.06)
Length = 118
Score = 31.9 bits (69), Expect = 0.70
Identities = 14/29 (48%), Positives = 19/29 (65%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAI 400
+A LK EGN K + Y EA++KY RA+
Sbjct: 31 QAFSLKEEGNGCFKQKNYREAMKKYHRAM 59
>SB_21064| Best HMM Match : TPR_2 (HMM E-Value=3.5e-09)
Length = 372
Score = 31.5 bits (68), Expect = 0.93
Identities = 14/38 (36%), Positives = 20/38 (52%)
Frame = +2
Query: 287 RLGPPANKAEAERLKNEGNELMKAERYNEALEKYTRAI 400
++ P A + K EGNEL +Y +A EKY A+
Sbjct: 211 QMDPKEKLAAIPKYKEEGNELYVDGKYKDAAEKYAEAL 248
>SB_58934| Best HMM Match : TPR_1 (HMM E-Value=3.8e-37)
Length = 1632
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +2
Query: 353 KAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVS 484
K E++N A + +A+ I+P ++V YC+ + EAA++
Sbjct: 1447 KQEKFNLAEVHFRKALSINPSSSVLYCHVGVVQHAMRKSEAALA 1490
>SB_4447| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 770
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/115 (25%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Frame = +3
Query: 282 VSDWGRPLTRLKPNDSRTKATSS*KLSVTTKRLKSTRAP*RSTQETRSTTAIARLRISGC 461
+ ++ + +LK N SR+ +S T LKS + ++ R + +A+ R S
Sbjct: 162 MDEYHEAMKKLKVNRSRSVLIAS------TNLLKSLKRKRLILKKDRRLSLVAQRRESLV 215
Query: 462 ATPRQR*ATVPTALALSLTIARRTDALGSRSPP---SRDTARRALPTPAPLQLRP 617
+ L +S ++ R + L SRSPP S + + +LP+ PL+ P
Sbjct: 216 ENQLPGQTSPNNFLTVSDSLQRLNEELDSRSPPTLHSNNNSSESLPSNTPLKETP 270
>SB_54763| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1190
Score = 29.9 bits (64), Expect = 2.8
Identities = 11/38 (28%), Positives = 22/38 (57%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEIDPRN 418
+K + L G L+ + Y ++ E +T+ +E+DP+N
Sbjct: 1048 DKENIKALFRRGKALLNLKDYEKSKEDFTQVLELDPKN 1085
>SB_19540| Best HMM Match : Pro_isomerase (HMM E-Value=1.5e-23)
Length = 741
Score = 29.9 bits (64), Expect = 2.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +2
Query: 317 AERLKNEGNELMKAERYNEALEKYTRAI 400
AE+LK GNE K ++Y A +KY +A+
Sbjct: 300 AEKLKVIGNEQFKQQKYEVAKKKYKKAL 327
>SB_41996| Best HMM Match : Tropomyosin (HMM E-Value=0.26)
Length = 363
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/77 (27%), Positives = 33/77 (42%)
Frame = +3
Query: 504 ALSLTIARRTDALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPRKPPTSLTKPLAQRPN 683
+L +++ A S SP S R +PAP++ + P K + +PLA
Sbjct: 235 SLKKKLSKLEQAFNSPSPRSSAITRLMRESPAPMEFKRPRLTPPEKYDEN--QPLASNQP 292
Query: 684 DLSGLLRNPALINMATE 734
G+ +P L N A E
Sbjct: 293 SSGGVKMDPELENAAKE 309
>SB_21585| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 479
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +2
Query: 305 NKAEAERLKNEGNELMKAERYNEALEKYTRAIEI 406
N+ ERL + L+KAE+Y E +K A+E+
Sbjct: 166 NEKTLERLFTKAGNLVKAEKYKELAKKRAHAMEM 199
>SB_17203| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2672
Score = 29.1 bits (62), Expect = 5.0
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Frame = +2
Query: 302 ANKAEAERLKNEG-NELMKAERYNEALEKYTRAIEIDPRNAV 424
A A + NE N+LMK E N L++ +A+E++ N V
Sbjct: 457 ATNASLQETVNESTNKLMKMEEQNTRLQEQIKAVEVERVNLV 498
>SB_21411| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 308
Score = 29.1 bits (62), Expect = 5.0
Identities = 20/69 (28%), Positives = 34/69 (49%)
Frame = +2
Query: 335 EGNELMKAERYNEALEKYTRAIEIDPRNAVYYCNRAAAHFRLCDPEAAVSDCTNSTRPQP 514
E M+ + A+E+ T AIE+ P + RA + R D A+SD +T+
Sbjct: 2 EAKYAMERGDCHSAIEQLTHAIEVAPWDPELRMMRADCYERQGDLIKAISDIKPTTKLIN 61
Query: 515 DYSKAYGRL 541
D ++A+ R+
Sbjct: 62 DNTQAFLRM 70
>SB_57007| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 666
Score = 28.7 bits (61), Expect = 6.6
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -2
Query: 551 ARAQGVRTPCYSQAEGECCWYSRSPLPRGRTA*NAQPRDCSSRPRFLGRSLWRACT 384
A +G++ P Y+ A G+C YSR P+GR + N + P RS R+ T
Sbjct: 99 ASTRGLKPPPYATA-GDC--YSRKRCPQGRFSINLEGTGIELSPDVRWRSTGRSFT 151
>SB_54632| Best HMM Match : TPR_1 (HMM E-Value=1.4e-20)
Length = 1195
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Frame = +2
Query: 338 GNELMKAERYNEALEKYTRAIEI-DPRNA--VYYCNRAAAHF--RLCDPE-----AAVSD 487
G MKA+R+ +A+ + +AIEI P N+ A +F +C E A+
Sbjct: 1041 GKTNMKAKRFEDAISSFLKAIEILTPWNSRNPMPLEAAGVYFLIGMCQSEVHNDSGALDA 1100
Query: 488 CTNSTRPQPDYSKAYGRLGL 547
+ + PDY++A+ + GL
Sbjct: 1101 YNEAIKVNPDYAEAFYQRGL 1120
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 2/44 (4%)
Frame = +3
Query: 555 PPSRDTARRALP--TPAPLQLRP*ERVLPRKPPTSLTKPLAQRP 680
PP + TA P +PA P + VL KPPT T P + P
Sbjct: 450 PPGKTTAPTTKPPGSPAGSTQGPTDGVLSAKPPTKKTTPQSMIP 493
Score = 28.3 bits (60), Expect = 8.7
Identities = 30/109 (27%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Frame = +3
Query: 384 STRAP*RSTQETRSTTAIARLRISGCATPRQR*ATVPT----ALALSLTIARRTDALGSR 551
ST+ P + T ET+S T + TP +T PT A S T T A+ +
Sbjct: 160 STKPPTKKTGETQSPTENSISTEESATTPTPSGSTSPTSPNNASPQSSTRPGETTAIPKQ 219
Query: 552 SPPSRDTARRALPTPAPLQLRP*ERVL--PRKP----PTSLTKPLAQRP 680
+ P++ + TP + +P E + P+ P P TK A +P
Sbjct: 220 TGPTQPPGSTKITTPQH-ETKPGETTVSTPKAPGPTQPAGTTKNTAPQP 267
>SB_40786| Best HMM Match : WSC (HMM E-Value=0.44)
Length = 230
Score = 28.7 bits (61), Expect = 6.6
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 4/74 (5%)
Frame = +3
Query: 537 ALGSRSPPSRDTARRALPTPAPLQLRP*ERVLPRKP----PTSLTKPLAQRPNDLSGLLR 704
A GS SP ++ T LPT P P +R P PT +P LSGLL
Sbjct: 114 ARGS-SPTNKPTETETLPTTLPTTPTPTKRPSPSPTGTGTPTRKPEPTLSPTRMLSGLLC 172
Query: 705 NPALINMATEMLTN 746
++++ T T+
Sbjct: 173 QSFVVSLCTRQDTS 186
>SB_38580| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 990
Score = 28.7 bits (61), Expect = 6.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = +2
Query: 482 SDCTNSTRPQPDYSKAYGRLGLALTA 559
+DCT P PDY K +LG+ T+
Sbjct: 872 ADCTRGYWPSPDYRKCEFKLGVTFTS 897
>SB_49426| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 447
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/28 (35%), Positives = 17/28 (60%)
Frame = -2
Query: 251 RIFRRQLESGLNALHADFDTLSRIRAQR 168
R+ RQL + ++ +H D D +S +R R
Sbjct: 246 RVLNRQLTAQIDKIHGDIDAISELRMPR 273
>SB_20703| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 693
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEI 406
+A+ +GNEL ++ EALE+Y +A+++
Sbjct: 11 QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_14077| Best HMM Match : TPR_1 (HMM E-Value=0)
Length = 357
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEI 406
+A+ +GNEL ++ EALE+Y +A+++
Sbjct: 11 QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_54160| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 871
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEI 406
+A+ +GNEL ++ EALE+Y +A+++
Sbjct: 11 QAQVYLRKGNELYDLGKHREALEQYQQALQV 41
>SB_46974| Best HMM Match : TPR_1 (HMM E-Value=1.5e-10)
Length = 466
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +2
Query: 338 GNELMKAERYNEALEKYTRAIEIDPRN 418
G +E Y EAL+ Y A++IDP N
Sbjct: 421 GTAAYHSEEYVEALKDYESALKIDPNN 447
>SB_38427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1106
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 21/31 (67%)
Frame = +2
Query: 314 EAERLKNEGNELMKAERYNEALEKYTRAIEI 406
+A+ +GNEL ++ EALE+Y +A+++
Sbjct: 11 QAQVYFRKGNELYNLGKHREALEQYQQALQV 41
>SB_22798| Best HMM Match : Cadherin (HMM E-Value=0)
Length = 3255
Score = 28.3 bits (60), Expect = 8.7
Identities = 16/66 (24%), Positives = 26/66 (39%)
Frame = +3
Query: 87 LKIEMSNEIKIVAASIVNFLKQQLDGDSLSPDSRESVEVGVQCIETAFELTTEDAAEAWT 266
+K ++ + ++ +V SLS V+ V C F +T + A A T
Sbjct: 2261 VKFRLAEQTELGGNRVVKVEAYDQGSPSLSSQVSVIVQTSVSCEAMVFSITEDGAISAKT 2320
Query: 267 YCSLSV 284
CS V
Sbjct: 2321 ICSFDV 2326
>SB_15665| Best HMM Match : Keratin_B2 (HMM E-Value=0.0098)
Length = 300
Score = 28.3 bits (60), Expect = 8.7
Identities = 12/28 (42%), Positives = 14/28 (50%)
Frame = +2
Query: 422 VYYCNRAAAHFRLCDPEAAVSDCTNSTR 505
V YC A R C P AA++ C S R
Sbjct: 234 VRYCKPNAGKLRYCKPNAALNHCQRSFR 261
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,362,722
Number of Sequences: 59808
Number of extensions: 471695
Number of successful extensions: 1630
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 1482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1621
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2503194881
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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