Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30788
         (734 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00004988DF Cluster: protein kinase; n=1; Entamoeba h...    38   0.26 
UniRef50_A4MAL2 Cluster: Putative uncharacterized protein; n=1; ...    35   2.4  
UniRef50_A0EHZ9 Cluster: Chromosome undetermined scaffold_98, wh...    34   3.1  
UniRef50_Q4SHN1 Cluster: Chromosome 5 SCAF14581, whole genome sh...    33   9.6  
UniRef50_A0BFC2 Cluster: Chromosome undetermined scaffold_103, w...    33   9.6  

>UniRef50_UPI00004988DF Cluster: protein kinase; n=1; Entamoeba
            histolytica HM-1:IMSS|Rep: protein kinase - Entamoeba
            histolytica HM-1:IMSS
          Length = 1883

 Score = 37.9 bits (84), Expect = 0.26
 Identities = 15/29 (51%), Positives = 21/29 (72%)
 Frame = +1

Query: 493  SEMHHYCKEFVKRGSLACENGHYFNAKYR 579
            S + H CK+F ++G   CENG+Y NAK+R
Sbjct: 1322 SSLQH-CKQFEQKGCSLCENGYYVNAKHR 1349


>UniRef50_A4MAL2 Cluster: Putative uncharacterized protein; n=1;
           Petrotoga mobilis SJ95|Rep: Putative uncharacterized
           protein - Petrotoga mobilis SJ95
          Length = 235

 Score = 34.7 bits (76), Expect = 2.4
 Identities = 27/61 (44%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
 Frame = +3

Query: 27  TYISSLIFSILGMFFAFIF--NY*SIISILA--FNLFYL*INTI-IAAKSVCLTYFVNSC 191
           +YI  +IF+ILG+  A IF  NY SIISI++  F  F L   TI +  K   +T   NS 
Sbjct: 136 SYIPWIIFAILGVIVAIIFSKNYQSIISIISVIFGSFILSFYTIYLLEKHTSITIGNNSL 195

Query: 192 L 194
           L
Sbjct: 196 L 196


>UniRef50_A0EHZ9 Cluster: Chromosome undetermined scaffold_98, whole
           genome shotgun sequence; n=1; Paramecium
           tetraurelia|Rep: Chromosome undetermined scaffold_98,
           whole genome shotgun sequence - Paramecium tetraurelia
          Length = 261

 Score = 34.3 bits (75), Expect = 3.1
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 2/80 (2%)
 Frame = -3

Query: 666 KKLGACRFLVGAGITNIDDDTVQVQIVTTSILCIKIM-PIFTG-KGSSLYKLFTVVMHLT 493
           +++GA  + +   + N  D+T QV I+ T  + ++I+  IF G +  S   L T+     
Sbjct: 145 ERIGAAIYQITNKLQNSKDNTKQVYIIITHKVTLEILVDIFEGSREISESGLITIKFKSD 204

Query: 492 HTFSILFPCKVFNHVHKRKL 433
            TF I F  KVF    K+++
Sbjct: 205 STFGISFVGKVFKMKEKKQI 224


>UniRef50_Q4SHN1 Cluster: Chromosome 5 SCAF14581, whole genome shotgun
            sequence; n=4; Clupeocephala|Rep: Chromosome 5 SCAF14581,
            whole genome shotgun sequence - Tetraodon nigroviridis
            (Green puffer)
          Length = 2884

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 12/41 (29%), Positives = 21/41 (51%)
 Frame = +1

Query: 511  CKEFVKRGSLACENGHYFNAKYRGCNNLYLYSVVVDVCDPG 633
            C+  +      C+NG+  +A  R C ++    + VD+C PG
Sbjct: 1167 CRNTIGSFRCRCDNGYALDADERNCTDIDECRISVDICGPG 1207


>UniRef50_A0BFC2 Cluster: Chromosome undetermined scaffold_103, whole
            genome shotgun sequence; n=1; Paramecium tetraurelia|Rep:
            Chromosome undetermined scaffold_103, whole genome
            shotgun sequence - Paramecium tetraurelia
          Length = 2120

 Score = 32.7 bits (71), Expect = 9.6
 Identities = 20/87 (22%), Positives = 39/87 (44%), Gaps = 2/87 (2%)
 Frame = +1

Query: 340  FKNFLQSARVGTLMVLKDYRSLFVLFDTSDCEFSFVYMIENFAGK*NT--KCMSEMHHYC 513
            FKN L+ +    ++ ++ Y + +     SDCE     + E       T   C  ++  YC
Sbjct: 1041 FKNCLKCSYHSCILCMEGYHTDYQSNCISDCEDGIQTINEKCEINEQTCLSCEFQISKYC 1100

Query: 514  KEFVKRGSLACENGHYFNAKYRGCNNL 594
            +       L C++G+Y+N   + C ++
Sbjct: 1101 QYQPLELCLQCKHGYYYNLLIQDCESI 1127


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 648,461,436
Number of Sequences: 1657284
Number of extensions: 12025837
Number of successful extensions: 25488
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 24518
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25481
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)