BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30784 (881 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0771 + 6453130-6454488 43 4e-04 03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502... 42 9e-04 11_02_0011 - 7337618-7338496,7338596-7338991 40 0.002 11_01_0767 + 6438648-6438809,6439146-6440000 40 0.002 11_01_0750 - 6315126-6315896,6316371-6316784 40 0.002 03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 40 0.003 11_02_0014 - 7352619-7352918,7353173-7353418 37 0.019 01_01_1152 + 9170628-9171899 36 0.057 11_02_0012 - 7346282-7347136,7347234-7347593 33 0.23 01_06_0824 - 32243495-32244319,32244449-32244859 33 0.23 02_02_0383 + 9579624-9579951,9580062-9580324,9580432-9580917,958... 31 1.6 05_06_0247 + 26661671-26661802,26661958-26662055,26662223-266622... 29 3.7 01_01_0433 + 3282195-3285185 28 8.6 >11_01_0771 + 6453130-6454488 Length = 452 Score = 42.7 bits (96), Expect = 4e-04 Identities = 16/35 (45%), Positives = 24/35 (68%) Frame = +1 Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKG 384 ++ ++L +A+YFKG+W PFN S T + PFY G Sbjct: 201 ETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDG 235 >03_05_0293 + 22849103-22849513,22849670-22849756,22850156-22850284, 22850507-22851262,22853474-22854250 Length = 719 Score = 41.5 bits (93), Expect = 9e-04 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 4/151 (2%) Frame = +1 Query: 253 KIVDTGSFQDS-QMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429 +I+ GS + +++L +ALYFKG WT F+ S T F+ G+ + M ++ Y Sbjct: 231 EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKKQY 290 Query: 430 PFSNIKILNARVIELPY---GVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRI 600 S N +V++LPY G + + SM L S+ K L+ + F E I Sbjct: 291 ILS---YDNLKVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEFLEKHI 344 Query: 601 SKEEFSDDEVDCFIPRFKIESNLGMTSVLKN 693 + + + +P+FKI + +LK+ Sbjct: 345 PTRQVTVGQFK--LPKFKISFGFEASDLLKS 373 Score = 40.7 bits (91), Expect = 0.002 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 3/140 (2%) Frame = +1 Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNA 459 +++++L +ALYFKG W F+ S T F+ GE + + M R S+ L Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESV-QAPFMSTRKKQYLSSYDSL-- 549 Query: 460 RVIELPY---GVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSDDEV 630 +V++LPY G + + SM L S+ K L+ + F E I + Sbjct: 550 KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEFMENHIPMRPVHVGQF 606 Query: 631 DCFIPRFKIESNLGMTSVLK 690 +P+FKI G + +LK Sbjct: 607 K--LPKFKISFGFGASGLLK 624 >11_02_0011 - 7337618-7338496,7338596-7338991 Length = 424 Score = 40.3 bits (90), Expect = 0.002 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%) Frame = +1 Query: 253 KIVDTGSFQ-DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNR 420 +I+ GS D+ ++L +A+YFKG+W+ PF SST+ F+ G + +V M +R Sbjct: 154 EILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSV-DVPFMSSR 209 >11_01_0767 + 6438648-6438809,6439146-6440000 Length = 338 Score = 40.3 bits (90), Expect = 0.002 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%) Frame = +1 Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNA 459 D++ ++ +A+YFKG+W PF+ S T++ F G + EV M R + + ++ + Sbjct: 86 DTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSV-EVPFM-QRPSGSYHHVACHDG 143 Query: 460 -RVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSDDEV-- 630 RV+ LPY + L +L +F+ L + + S EF D+ + Sbjct: 144 FRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITAS-PEFVDEHLPP 202 Query: 631 DCF------IPRFKIE-SNLGMTSVLK 690 C +P+FK+ + G+ VL+ Sbjct: 203 GCVPVGRFRVPKFKLAFCHYGIADVLR 229 >11_01_0750 - 6315126-6315896,6316371-6316784 Length = 394 Score = 40.3 bits (90), Expect = 0.002 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%) Frame = +1 Query: 250 TKIVDTGSF-QDSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHT 426 T ++ G+ Q++ ++L SALYF+G+W + T++ FY G + + Y+R T Sbjct: 159 TTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDR-T 217 Query: 427 YPFSNIKILNARVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISK 606 F+ N +VI+LPY + L +F +++ + F E + Sbjct: 218 RLFAVHD--NFKVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPT 275 Query: 607 EEFSDDEVDCFIPRFKIESNLGMTSVLKNAMGIE 708 E+ V +P FKI + + LK+ MG+E Sbjct: 276 EKC---HVGISVPNFKISFQIDVKDFLKD-MGLE 305 >03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869 Length = 258 Score = 39.5 bits (88), Expect = 0.003 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%) Frame = +1 Query: 253 KIVDTGSFQDS-QMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429 +I+ GS + +++L +ALYFKG WT F+ S T F G+ + M ++ Y Sbjct: 23 EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQY 82 Query: 430 PFSNIKILNARVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKE 609 S + +V++LPY L + L ++ +L+ + F E RI Sbjct: 83 LSSYDSL---KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTR 139 Query: 610 EFSDDEVDCFIPRFKIESNLGMTSVLK 690 + + + +P+FKI + +LK Sbjct: 140 QVTVGKFK--LPKFKISFGFEASDLLK 164 >11_02_0014 - 7352619-7352918,7353173-7353418 Length = 181 Score = 37.1 bits (82), Expect = 0.019 Identities = 21/64 (32%), Positives = 33/64 (51%) Frame = +1 Query: 289 MLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNARVI 468 ++L +A+YFKG+W+ PF ST+ F+ G + V M +R N V+ Sbjct: 117 LVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSV-NVRFMRSREDQYIGFYDGFN--VL 173 Query: 469 ELPY 480 +LPY Sbjct: 174 KLPY 177 >01_01_1152 + 9170628-9171899 Length = 423 Score = 35.5 bits (78), Expect = 0.057 Identities = 12/28 (42%), Positives = 22/28 (78%) Frame = +1 Query: 289 MLLTSALYFKGQWTIPFNTSSTSKLPFY 372 ++L +A++FKG W++PF+ S+T PF+ Sbjct: 190 VVLANAVHFKGTWSLPFHPSATFHAPFH 217 >11_02_0012 - 7346282-7347136,7347234-7347593 Length = 404 Score = 33.5 bits (73), Expect = 0.23 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%) Frame = +1 Query: 253 KIVDTGSFQD-SQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429 +I+ GS + ++L +A+YFKG+W+ PF T+ F+ G + M Y Sbjct: 142 EILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQY 201 Query: 430 PFSNIKILNA-RVIELPY 480 I + +V++LPY Sbjct: 202 ----IGFYDGFKVLKLPY 215 >01_06_0824 - 32243495-32244319,32244449-32244859 Length = 411 Score = 33.5 bits (73), Expect = 0.23 Identities = 21/63 (33%), Positives = 28/63 (44%) Frame = +1 Query: 292 LLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNARVIE 471 +L +ALYFKG W F+ STS FY G + M + Y +V+ Sbjct: 173 VLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFMSSGKWQYIACR---AGYKVLR 229 Query: 472 LPY 480 LPY Sbjct: 230 LPY 232 >02_02_0383 + 9579624-9579951,9580062-9580324,9580432-9580917, 9581034-9581459 Length = 500 Score = 30.7 bits (66), Expect = 1.6 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%) Frame = +1 Query: 496 LSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSD------DEVDCFIPRFKI 657 +S T ++V HLA F+ + +D RIS+E+ +E+ F PR++ Sbjct: 425 ISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQ 484 Query: 658 ESNLGMTSVLKN 693 ++ LG ++ +N Sbjct: 485 QTYLGFSNESEN 496 >05_06_0247 + 26661671-26661802,26661958-26662055,26662223-26662253, 26662607-26662667,26662693-26662754,26662793-26662892, 26663021-26663091,26663206-26663349,26663913-26663994, 26664380-26664456 Length = 285 Score = 29.5 bits (63), Expect = 3.7 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%) Frame = +1 Query: 382 GEKIGEVNMMYNRHTYPFSNIKILNARVIELP--YG-VENRLSMLTWCQ 519 GE +GEV ++ + H + A I LP YG +E L M+TWCQ Sbjct: 131 GESVGEVIVVQDMHERKAEMARRSKA-FIALPGGYGTMEELLEMITWCQ 178 >01_01_0433 + 3282195-3285185 Length = 996 Score = 28.3 bits (60), Expect = 8.6 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%) Frame = -3 Query: 339 KWYSPL--TFKIECTCQ-QHLRVLETTGVNYLGILPW 238 K+Y PL T + C+ Q+LR+L+ N+ G+LP+ Sbjct: 742 KFYGPLGPTLAKDDECELQYLRILDLASNNFSGVLPY 778 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 24,776,973 Number of Sequences: 37544 Number of extensions: 553967 Number of successful extensions: 1362 Number of sequences better than 10.0: 13 Number of HSP's better than 10.0 without gapping: 1321 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1362 length of database: 14,793,348 effective HSP length: 81 effective length of database: 11,752,284 effective search space used: 2491484208 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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