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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30784
         (881 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0771 + 6453130-6454488                                           43   4e-04
03_05_0293 + 22849103-22849513,22849670-22849756,22850156-228502...    42   9e-04
11_02_0011 - 7337618-7338496,7338596-7338991                           40   0.002
11_01_0767 + 6438648-6438809,6439146-6440000                           40   0.002
11_01_0750 - 6315126-6315896,6316371-6316784                           40   0.002
03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869     40   0.003
11_02_0014 - 7352619-7352918,7353173-7353418                           37   0.019
01_01_1152 + 9170628-9171899                                           36   0.057
11_02_0012 - 7346282-7347136,7347234-7347593                           33   0.23 
01_06_0824 - 32243495-32244319,32244449-32244859                       33   0.23 
02_02_0383 + 9579624-9579951,9580062-9580324,9580432-9580917,958...    31   1.6  
05_06_0247 + 26661671-26661802,26661958-26662055,26662223-266622...    29   3.7  
01_01_0433 + 3282195-3285185                                           28   8.6  

>11_01_0771 + 6453130-6454488
          Length = 452

 Score = 42.7 bits (96), Expect = 4e-04
 Identities = 16/35 (45%), Positives = 24/35 (68%)
 Frame = +1

Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKG 384
           ++ ++L +A+YFKG+W  PFN S T + PFY   G
Sbjct: 201 ETAVVLGNAIYFKGKWDRPFNESDTERKPFYRHDG 235


>03_05_0293 +
           22849103-22849513,22849670-22849756,22850156-22850284,
           22850507-22851262,22853474-22854250
          Length = 719

 Score = 41.5 bits (93), Expect = 9e-04
 Identities = 41/151 (27%), Positives = 70/151 (46%), Gaps = 4/151 (2%)
 Frame = +1

Query: 253 KIVDTGSFQDS-QMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429
           +I+  GS   + +++L +ALYFKG WT  F+ S T    F+   G+ +    M  ++  Y
Sbjct: 231 EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFHLLDGKSVQAPFMSTSKKQY 290

Query: 430 PFSNIKILNARVIELPY---GVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRI 600
             S     N +V++LPY   G + + SM          L S+  K   L+ +  F E  I
Sbjct: 291 ILS---YDNLKVLKLPYQQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEFLEKHI 344

Query: 601 SKEEFSDDEVDCFIPRFKIESNLGMTSVLKN 693
              + +  +    +P+FKI      + +LK+
Sbjct: 345 PTRQVTVGQFK--LPKFKISFGFEASDLLKS 373



 Score = 40.7 bits (91), Expect = 0.002
 Identities = 39/140 (27%), Positives = 63/140 (45%), Gaps = 3/140 (2%)
 Frame = +1

Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNA 459
           +++++L +ALYFKG W   F+ S T    F+   GE + +   M  R     S+   L  
Sbjct: 493 NTKLVLANALYFKGAWAEKFDVSKTEDGEFHLLDGESV-QAPFMSTRKKQYLSSYDSL-- 549

Query: 460 RVIELPY---GVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSDDEV 630
           +V++LPY   G + + SM          L S+  K   L+ +  F E  I        + 
Sbjct: 550 KVLKLPYLQGGDKRQFSMYILLPEAQDGLWSLAEK---LNSEPEFMENHIPMRPVHVGQF 606

Query: 631 DCFIPRFKIESNLGMTSVLK 690
              +P+FKI    G + +LK
Sbjct: 607 K--LPKFKISFGFGASGLLK 624


>11_02_0011 - 7337618-7338496,7338596-7338991
          Length = 424

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +1

Query: 253 KIVDTGSFQ-DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNR 420
           +I+  GS   D+ ++L +A+YFKG+W+ PF  SST+   F+   G  + +V  M +R
Sbjct: 154 EILPDGSVHVDTALVLVNAIYFKGKWSNPFPRSSTTTGKFHRLDGSSV-DVPFMSSR 209


>11_01_0767 + 6438648-6438809,6439146-6440000
          Length = 338

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 10/147 (6%)
 Frame = +1

Query: 280 DSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNA 459
           D++ ++ +A+YFKG+W  PF+ S T++  F    G  + EV  M  R +  + ++   + 
Sbjct: 86  DTRHVVGNAIYFKGEWLAPFDKSDTAEREFRRLDGSSV-EVPFM-QRPSGSYHHVACHDG 143

Query: 460 -RVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSDDEV-- 630
            RV+ LPY   +    L    +L      +F+      L    + +  S  EF D+ +  
Sbjct: 144 FRVLRLPYKATSDTYNLKLRYSLPSFAMLVFLPDDRDGLPGLLDRITAS-PEFVDEHLPP 202

Query: 631 DCF------IPRFKIE-SNLGMTSVLK 690
            C       +P+FK+   + G+  VL+
Sbjct: 203 GCVPVGRFRVPKFKLAFCHYGIADVLR 229


>11_01_0750 - 6315126-6315896,6316371-6316784
          Length = 394

 Score = 40.3 bits (90), Expect = 0.002
 Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 1/154 (0%)
 Frame = +1

Query: 250 TKIVDTGSF-QDSQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHT 426
           T ++  G+  Q++ ++L SALYF+G+W    +   T++  FY   G  +    + Y+R T
Sbjct: 159 TTLLPAGTIDQNTGLVLGSALYFRGRWLDRDDLRRTTEQKFYCLDGTSVEVPFVEYDR-T 217

Query: 427 YPFSNIKILNARVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISK 606
             F+     N +VI+LPY         +    L      +F   +++  +  F E  +  
Sbjct: 218 RLFAVHD--NFKVIKLPYKQGKNERKFSMYIFLPDDHDGLFELTQKIFSEPMFLEQHLPT 275

Query: 607 EEFSDDEVDCFIPRFKIESNLGMTSVLKNAMGIE 708
           E+     V   +P FKI   + +   LK+ MG+E
Sbjct: 276 EKC---HVGISVPNFKISFQIDVKDFLKD-MGLE 305


>03_05_0296 + 22866280-22866282,22867178-22867444,22868363-22868869
          Length = 258

 Score = 39.5 bits (88), Expect = 0.003
 Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 1/147 (0%)
 Frame = +1

Query: 253 KIVDTGSFQDS-QMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429
           +I+  GS   + +++L +ALYFKG WT  F+ S T    F    G+ +    M  ++  Y
Sbjct: 23  EILPPGSVDHTTRLVLGNALYFKGAWTEKFDASKTKDGEFRLLDGKSVLAPFMSTSKKQY 82

Query: 430 PFSNIKILNARVIELPYGVENRLSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKE 609
             S   +   +V++LPY     L   +    L      ++    +L+ +  F E RI   
Sbjct: 83  LSSYDSL---KVLKLPYQKGRDLRQFSMYILLPEAQDGLWSLAAKLNSEPEFLEKRIPTR 139

Query: 610 EFSDDEVDCFIPRFKIESNLGMTSVLK 690
           + +  +    +P+FKI      + +LK
Sbjct: 140 QVTVGKFK--LPKFKISFGFEASDLLK 164


>11_02_0014 - 7352619-7352918,7353173-7353418
          Length = 181

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 21/64 (32%), Positives = 33/64 (51%)
 Frame = +1

Query: 289 MLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNARVI 468
           ++L +A+YFKG+W+ PF   ST+   F+   G  +  V  M +R           N  V+
Sbjct: 117 LVLVNAIYFKGKWSDPFPRESTTTGKFHRLDGSSV-NVRFMRSREDQYIGFYDGFN--VL 173

Query: 469 ELPY 480
           +LPY
Sbjct: 174 KLPY 177


>01_01_1152 + 9170628-9171899
          Length = 423

 Score = 35.5 bits (78), Expect = 0.057
 Identities = 12/28 (42%), Positives = 22/28 (78%)
 Frame = +1

Query: 289 MLLTSALYFKGQWTIPFNTSSTSKLPFY 372
           ++L +A++FKG W++PF+ S+T   PF+
Sbjct: 190 VVLANAVHFKGTWSLPFHPSATFHAPFH 217


>11_02_0012 - 7346282-7347136,7347234-7347593
          Length = 404

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
 Frame = +1

Query: 253 KIVDTGSFQD-SQMLLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTY 429
           +I+  GS    + ++L +A+YFKG+W+ PF    T+   F+   G  +    M      Y
Sbjct: 142 EILPDGSVHGGTALVLVNAIYFKGKWSNPFPRERTTTGKFHRLDGSSVDAPFMSSREDQY 201

Query: 430 PFSNIKILNA-RVIELPY 480
               I   +  +V++LPY
Sbjct: 202 ----IGFYDGFKVLKLPY 215


>01_06_0824 - 32243495-32244319,32244449-32244859
          Length = 411

 Score = 33.5 bits (73), Expect = 0.23
 Identities = 21/63 (33%), Positives = 28/63 (44%)
 Frame = +1

Query: 292 LLTSALYFKGQWTIPFNTSSTSKLPFYNSKGEKIGEVNMMYNRHTYPFSNIKILNARVIE 471
           +L +ALYFKG W   F+  STS   FY   G  +    M   +  Y          +V+ 
Sbjct: 173 VLGNALYFKGDWESKFDARSTSDDVFYLPDGGHVSAPFMSSGKWQYIACR---AGYKVLR 229

Query: 472 LPY 480
           LPY
Sbjct: 230 LPY 232


>02_02_0383 +
           9579624-9579951,9580062-9580324,9580432-9580917,
           9581034-9581459
          Length = 500

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 19/72 (26%), Positives = 36/72 (50%), Gaps = 6/72 (8%)
 Frame = +1

Query: 496 LSMLTWCQTLVFHLASMFMKFKELSLDSFFEELRISKEEFSD------DEVDCFIPRFKI 657
           +S  T   ++V HLA     F+ + +D      RIS+E+         +E+  F PR++ 
Sbjct: 425 ISFKTNANSMVSHLAGKNSIFRAMPVDVIANAYRISREQARSLKNNRGEELGAFTPRYQQ 484

Query: 658 ESNLGMTSVLKN 693
           ++ LG ++  +N
Sbjct: 485 QTYLGFSNESEN 496


>05_06_0247 +
           26661671-26661802,26661958-26662055,26662223-26662253,
           26662607-26662667,26662693-26662754,26662793-26662892,
           26663021-26663091,26663206-26663349,26663913-26663994,
           26664380-26664456
          Length = 285

 Score = 29.5 bits (63), Expect = 3.7
 Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = +1

Query: 382 GEKIGEVNMMYNRHTYPFSNIKILNARVIELP--YG-VENRLSMLTWCQ 519
           GE +GEV ++ + H       +   A  I LP  YG +E  L M+TWCQ
Sbjct: 131 GESVGEVIVVQDMHERKAEMARRSKA-FIALPGGYGTMEELLEMITWCQ 178


>01_01_0433 + 3282195-3285185
          Length = 996

 Score = 28.3 bits (60), Expect = 8.6
 Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
 Frame = -3

Query: 339 KWYSPL--TFKIECTCQ-QHLRVLETTGVNYLGILPW 238
           K+Y PL  T   +  C+ Q+LR+L+    N+ G+LP+
Sbjct: 742 KFYGPLGPTLAKDDECELQYLRILDLASNNFSGVLPY 778


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,776,973
Number of Sequences: 37544
Number of extensions: 553967
Number of successful extensions: 1362
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1321
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1362
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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