BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30784 (881 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cycl... 24 2.1 AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 24 2.1 AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cycl... 24 2.1 D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 8.6 AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 8.6 >AY769960-1|AAV34676.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 23.8 bits (49), Expect = 2.1 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 448 ILNARVIELP-YGVENRLSMLTWCQTLVFHL 537 + N + EL VE ++S +T+C+ FHL Sbjct: 189 VSNPMIAELETLSVEPKVSPMTFCRVFPFHL 219 >AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 protein. Length = 232 Score = 23.8 bits (49), Expect = 2.1 Identities = 18/70 (25%), Positives = 31/70 (44%) Frame = -3 Query: 267 GVNYLGILPWVKLEMAEFNKLTEFCASSKLXXXXXXXXXVFALS*KSCCGKRCLSTIMAL 88 G+ LG+L + L++ +K E + +F +S CCG S M + Sbjct: 25 GILTLGVL--IHLQILGVSKQIETGLAFPSITLIVLGSIIFVISFFGCCGAIRESHCMTI 82 Query: 87 ILASSIVFVL 58 AS ++F+L Sbjct: 83 TFASFLLFIL 92 >AB181489-1|BAD22772.1| 603|Apis mellifera soluble guanylyl cyclase beta 1 subunit protein. Length = 603 Score = 23.8 bits (49), Expect = 2.1 Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%) Frame = +1 Query: 448 ILNARVIELP-YGVENRLSMLTWCQTLVFHL 537 + N + EL VE ++S +T+C+ FHL Sbjct: 189 VSNPMIAELETLSVEPKVSPMTFCRVFPFHL 219 >D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.8 bits (44), Expect = 8.6 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +1 Query: 541 SMFMKFKELSLDSFFEELRISKEEFSDD 624 +MF KF L +F+E ++ +D+ Sbjct: 461 NMFKKFASLKKSPYFKEANLNTRMLNDN 488 >AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase protein. Length = 567 Score = 21.8 bits (44), Expect = 8.6 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +1 Query: 541 SMFMKFKELSLDSFFEELRISKEEFSDD 624 +MF KF L +F+E ++ +D+ Sbjct: 461 NMFKKFASLKKSPYFKEANLNTRMLNDN 488 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 264,735 Number of Sequences: 438 Number of extensions: 6952 Number of successful extensions: 19 Number of sequences better than 10.0: 5 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 19 length of database: 146,343 effective HSP length: 57 effective length of database: 121,377 effective search space used: 28644972 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -