Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30783
         (867 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q9VDR6 Cluster: CG4451-PA; n=10; Endopterygota|Rep: CG4...    44   0.004
UniRef50_Q4RMN6 Cluster: Chromosome 10 SCAF15019, whole genome s...    40   0.082
UniRef50_UPI00005A38C0 Cluster: PREDICTED: similar to heparan su...    37   0.76 
UniRef50_UPI00005852C3 Cluster: PREDICTED: similar to heparan su...    36   1.8  
UniRef50_Q1ZXJ1 Cluster: Leucine-rich repeat-containing protein;...    35   3.1  
UniRef50_A7SIL9 Cluster: Predicted protein; n=1; Nematostella ve...    34   5.4  
UniRef50_Q9YVU2 Cluster: ORF MSV150 putative NTP pyrophosphohydr...    33   7.1  
UniRef50_A2AEM3 Cluster: Heparan sulfate 6-O-sulfotransferase 2;...    33   7.1  
UniRef50_Q96MM7 Cluster: Heparan-sulfate 6-O-sulfotransferase 2;...    33   7.1  

>UniRef50_Q9VDR6 Cluster: CG4451-PA; n=10; Endopterygota|Rep:
           CG4451-PA - Drosophila melanogaster (Fruit fly)
          Length = 462

 Score = 44.4 bits (100), Expect = 0.004
 Identities = 20/30 (66%), Positives = 25/30 (83%)
 Frame = +3

Query: 33  QVARIQQLNSLDLELYDFAKNLMFKRFEAL 122
           Q  RI++LNSLD+ELY FAK L+F+RFE L
Sbjct: 393 QKRRIEKLNSLDIELYAFAKTLLFQRFEHL 422



 Score = 38.3 bits (85), Expect = 0.25
 Identities = 16/28 (57%), Positives = 22/28 (78%), Gaps = 1/28 (3%)
 Frame = +1

Query: 142 FEYRWRHLGEVS-RNGVTEFDWDSNLED 222
           FE R+ +LG +  + GVTEF+WDSN+ED
Sbjct: 429 FEQRYANLGNIYFKQGVTEFNWDSNVED 456


>UniRef50_Q4RMN6 Cluster: Chromosome 10 SCAF15019, whole genome
           shotgun sequence; n=2; Tetraodontidae|Rep: Chromosome 10
           SCAF15019, whole genome shotgun sequence - Tetraodon
           nigroviridis (Green puffer)
          Length = 546

 Score = 39.9 bits (89), Expect = 0.082
 Identities = 16/32 (50%), Positives = 25/32 (78%)
 Frame = +3

Query: 21  LSSAQVARIQQLNSLDLELYDFAKNLMFKRFE 116
           L +  V RI++LN LD+ELYD+AK+L  +R++
Sbjct: 440 LDNTTVQRIEELNELDMELYDYAKDLFQQRYQ 471


>UniRef50_UPI00005A38C0 Cluster: PREDICTED: similar to heparan
           sulfate 6-O-sulfotransferase; n=1; Canis lupus
           familiaris|Rep: PREDICTED: similar to heparan sulfate
           6-O-sulfotransferase - Canis familiaris
          Length = 617

 Score = 36.7 bits (81), Expect = 0.76
 Identities = 13/27 (48%), Positives = 23/27 (85%)
 Frame = +3

Query: 36  VARIQQLNSLDLELYDFAKNLMFKRFE 116
           + RI++LN LD++LYD+AK+L  +R++
Sbjct: 540 IRRIEELNDLDMQLYDYAKDLFQQRYQ 566


>UniRef50_UPI00005852C3 Cluster: PREDICTED: similar to heparan
           sulfate 6-O-sulfotransferase; n=1; Strongylocentrotus
           purpuratus|Rep: PREDICTED: similar to heparan sulfate
           6-O-sulfotransferase - Strongylocentrotus purpuratus
          Length = 394

 Score = 35.5 bits (78), Expect = 1.8
 Identities = 14/36 (38%), Positives = 25/36 (69%)
 Frame = +3

Query: 6   ATLAALSSAQVARIQQLNSLDLELYDFAKNLMFKRF 113
           A  + +  ++V  ++ +N LDLELY FA++L F+R+
Sbjct: 337 ANASPIQDSEVEGVRAVNPLDLELYAFARDLFFQRY 372


>UniRef50_Q1ZXJ1 Cluster: Leucine-rich repeat-containing protein;
           n=1; Dictyostelium discoideum AX4|Rep: Leucine-rich
           repeat-containing protein - Dictyostelium discoideum AX4
          Length = 624

 Score = 34.7 bits (76), Expect = 3.1
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +3

Query: 459 LNIKRQYKVSTRSGRANSCNYFTIIDYQIQNIRY*GYHR*HEYFENYK*NNQDN 620
           LN+ ++ K+  +    N+ N   II  +I N     YH  H Y  NY  NN +N
Sbjct: 32  LNLSKKIKIFFKGNNNNNNNNNNIIINRIYNNNNNNYHNYHNYNYNYNYNNNNN 85


>UniRef50_A7SIL9 Cluster: Predicted protein; n=1; Nematostella
           vectensis|Rep: Predicted protein - Nematostella
           vectensis
          Length = 374

 Score = 33.9 bits (74), Expect = 5.4
 Identities = 14/33 (42%), Positives = 22/33 (66%)
 Frame = +3

Query: 12  LAALSSAQVARIQQLNSLDLELYDFAKNLMFKR 110
           + +++  +  R + LNSLD+ LYD+AK L F R
Sbjct: 323 MKSMTQIEKRRTKSLNSLDIRLYDYAKALFFYR 355


>UniRef50_Q9YVU2 Cluster: ORF MSV150 putative NTP
           pyrophosphohydrolase mutT motif homolog (Vaccinia D10R),
           similar to SW:P32817; n=1; Melanoplus sanguinipes
           entomopoxvirus|Rep: ORF MSV150 putative NTP
           pyrophosphohydrolase mutT motif homolog (Vaccinia D10R),
           similar to SW:P32817 - Melanoplus sanguinipes
           entomopoxvirus (MsEPV)
          Length = 289

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
 Frame = -1

Query: 771 NVPGNP*RNTFMVLIYQNITMEIQCTYRYRRTQTYILIVHIL-IEKKKVRFRCLGYFIYS 595
           N+P  P +NT   +++  IT + +  +  R+   Y  I+H L I+KK+V    L YF   
Sbjct: 27  NIP-EPSKNTTFNIVF--ITADDKIVFGKRKDSYYFDILHRLTIKKKEVSNTTLRYFCCL 83

Query: 594 FQNIRV 577
           FQN+ +
Sbjct: 84  FQNLNI 89


>UniRef50_A2AEM3 Cluster: Heparan sulfate 6-O-sulfotransferase 2;
           n=19; Euteleostomi|Rep: Heparan sulfate
           6-O-sulfotransferase 2 - Mus musculus (Mouse)
          Length = 652

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +3

Query: 42  RIQQLNSLDLELYDFAKNLMFKRFE 116
           RI+ LN LD+ELY +AK+L  +R++
Sbjct: 516 RIEGLNFLDMELYSYAKDLFLQRYQ 540


>UniRef50_Q96MM7 Cluster: Heparan-sulfate 6-O-sulfotransferase 2;
           n=22; Euteleostomi|Rep: Heparan-sulfate
           6-O-sulfotransferase 2 - Homo sapiens (Human)
          Length = 605

 Score = 33.5 bits (73), Expect = 7.1
 Identities = 13/25 (52%), Positives = 20/25 (80%)
 Frame = +3

Query: 42  RIQQLNSLDLELYDFAKNLMFKRFE 116
           RI+ LN LD+ELY +AK+L  +R++
Sbjct: 476 RIEGLNFLDMELYSYAKDLFLQRYQ 500


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 823,358,741
Number of Sequences: 1657284
Number of extensions: 16319574
Number of successful extensions: 35264
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 34197
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35255
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 77062818868
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)