Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30779
(862 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-tr... 157 2e-39
SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans i... 138 9e-34
SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-tr... 136 4e-33
SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans... 121 1e-28
SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans... 111 1e-25
SPCC553.04 |cyp9||WD repeat containing cyclophilin family peptid... 95 9e-21
SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-tran... 84 2e-17
SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl cis-... 58 2e-09
SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating tra... 33 0.052
SPBP8B7.07c |set6||histone lysine methyltransferase Set6 |Schizo... 27 3.4
SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr ... 27 4.5
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 27 4.5
SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase comple... 27 4.5
SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr 1||... 26 6.0
SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces... 26 7.9
>SPBC28F2.03 |ppi1|cyp2|cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 162
Score = 157 bits (380), Expect = 2e-39
Identities = 72/101 (71%), Positives = 81/101 (80%)
Frame = +1
Query: 223 GLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNG 402
G F PQFMLQGGDFT NGTGGKSIYG KF DENF LKH PG+LSMANAG +TNG
Sbjct: 48 GSTFHRVIPQFMLQGGDFTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNG 107
Query: 403 SQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLG 525
SQFFITTV T WLDG+HVVFG V EGM+VVK++E+L ++ G
Sbjct: 108 SQFFITTVVTPWLDGKHVVFGEVTEGMDVVKKVESLGSNSG 148
Score = 82.6 bits (195), Expect = 7e-17
Identities = 37/59 (62%), Positives = 42/59 (71%)
Frame = +2
Query: 95 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEG 271
FFDV + PLG+IV +L DV PKT NFRALCTGEKG+GY GS FHRVIP + G
Sbjct: 5 FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGG 63
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/20 (60%), Positives = 13/20 (65%)
Frame = +3
Query: 507 LGSQSGKTSKRIVIKDCGQI 566
LGS SG T RIVI CG +
Sbjct: 143 LGSNSGATRARIVIDKCGTV 162
>SPBP8B7.25 |cyp4||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 201
Score = 138 bits (334), Expect = 9e-34
Identities = 62/94 (65%), Positives = 73/94 (77%)
Frame = +1
Query: 220 QGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 399
+G F P FM+QGGD T +GTGGKSIYG++F DENF L H PG+LSMANAG D+N
Sbjct: 72 EGSIFHRVIPNFMIQGGDITKGDGTGGKSIYGSRFPDENFKLSHQRPGLLSMANAGPDSN 131
Query: 400 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 501
GSQFFITTVKT WLDG HVVFG V+ G ++VK+I
Sbjct: 132 GSQFFITTVKTPWLDGHHVVFGEVLSGYDIVKKI 165
Score = 79.4 bits (187), Expect = 6e-16
Identities = 38/69 (55%), Positives = 44/69 (63%)
Frame = +2
Query: 65 NTGKMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRV 244
N G V+FD+ D LG++ I L PKT ENFRAL TGEKGFGY+GSIFHRV
Sbjct: 20 NRGPKVTDTVYFDLQQGDEFLGRVTIGLFGKTVPKTAENFRALATGEKGFGYEGSIFHRV 79
Query: 245 IPNSCCKEG 271
IPN + G
Sbjct: 80 IPNFMIQGG 88
>SPAC1B3.03c |wis2|cyp5|cyclophilin family peptidyl-prolyl cis-trans
isomerase Wis2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 356
Score = 136 bits (329), Expect = 4e-33
Identities = 66/108 (61%), Positives = 75/108 (69%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F FMLQGGDFT NGTGG+SIYG KFEDENF LKH P +LSMANAG
Sbjct: 49 LTYKGSRFHRVIKNFMLQGGDFTRGNGTGGESIYGEKFEDENFELKHDKPFLLSMANAGP 108
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRPL 534
+TNGSQFFITTV T LDG+HVVFG V++G V+ IE L P+
Sbjct: 109 NTNGSQFFITTVPTPHLDGKHVVFGKVIQGKSTVRTIENLETKNDDPV 156
Score = 47.2 bits (107), Expect = 3e-06
Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Frame = +2
Query: 95 FFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG----YKGSIFHRVIPNSCC 262
+F +++D I EL +V PKT +NF +LC G + G YKGS FHRVI N
Sbjct: 6 YFKISIDGKIQPTIYFELFDNVVPKTVKNFASLCNGFEKDGRCLTYKGSRFHRVIKNFML 65
Query: 263 KEG 271
+ G
Sbjct: 66 QGG 68
>SPBC1709.04c |cyp3||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp3 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 173
Score = 121 bits (292), Expect = 1e-28
Identities = 54/86 (62%), Positives = 70/86 (81%), Gaps = 1/86 (1%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNK-FEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVK 429
FM+QGGDF + +GTG +I+ ++ F DENFTLKH PG+LSMANAG D+NG QFFITTV
Sbjct: 67 FMIQGGDFVSGDGTGSATIFNSRTFPDENFTLKHDRPGLLSMANAGKDSNGCQFFITTVP 126
Query: 430 TSWLDGRHVVFGNVVEGMEVVKQIET 507
+LDG+HVVFG V+EG ++VK+IE+
Sbjct: 127 CDFLDGKHVVFGEVIEGYDIVKEIES 152
Score = 62.5 bits (145), Expect = 7e-11
Identities = 31/60 (51%), Positives = 36/60 (60%), Gaps = 6/60 (10%)
Frame = +2
Query: 86 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE------KGFGYKGSIFHRVI 247
P VF D+ +D LG+I I L S + PKT ENFR CTGE K GYK S FHR+I
Sbjct: 5 PVVFMDIAIDGRLLGRIKIRLFSSIVPKTAENFRQFCTGETLGVNQKPIGYKNSTFHRII 64
>SPAC57A10.03 |cyp1||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 111 bits (267), Expect = 1e-25
Identities = 56/106 (52%), Positives = 71/106 (66%), Gaps = 2/106 (1%)
Frame = +1
Query: 223 GLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTN 399
G+ F P F++QGGD T G GG SIYG+KF+DE + L HTG G+LSMANAG +TN
Sbjct: 40 GVIFHRVIPDFVIQGGDPTG-TGRGGTSIYGDKFDDEIHSDLHHTGAGILSMANAGPNTN 98
Query: 400 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAA-SLGRPL 534
SQFFIT T WLDG+H +FG VV G+ V K++ + S RP+
Sbjct: 99 SSQFFITLAPTPWLDGKHTIFGRVVSGLSVCKRMGLIRTDSSDRPI 144
Score = 51.2 bits (117), Expect = 2e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +2
Query: 125 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
LGKI+IEL ++ PKTC+NF L ++G+ Y G IFHRVIP+ +G PT T G
Sbjct: 10 LGKILIELYTEHAPKTCQNFYTL--AKEGY-YDGVIFHRVIPDFVI-QGGDPTGTGRG 63
>SPCC553.04 |cyp9||WD repeat containing cyclophilin family
peptidyl-prolyl cis-trans isomerase
Cyp9|Schizosaccharomyces pombe|chr 3|||Manual
Length = 610
Score = 95.5 bits (227), Expect = 9e-21
Identities = 47/85 (55%), Positives = 60/85 (70%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 429
FM+QGGD +GTGG+SI+ FEDE + LKH P +SMAN+G +TNGSQFFITT
Sbjct: 503 FMIQGGDPLG-DGTGGESIWKKDFEDEISPNLKHDRPFTVSMANSGPNTNGSQFFITTDL 561
Query: 430 TSWLDGRHVVFGNVVEGMEVVKQIE 504
T WLDG+H +F G++VV +IE
Sbjct: 562 TPWLDGKHTIFARAYAGLDVVHRIE 586
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/48 (37%), Positives = 25/48 (52%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEG 271
G I I+L + PK +NF E G+ Y +IFHR+I N + G
Sbjct: 464 GDISIKLYPEEAPKAVQNFTT--HAENGY-YDNTIFHRIIKNFMIQGG 508
>SPAC21E11.05c |cyp8||cyclophilin family peptidyl-prolyl cis-trans
isomerase Cyp8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 516
Score = 84.2 bits (199), Expect = 2e-17
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Frame = +1
Query: 250 QFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITTV 426
+FM+QGGD + G GG+SI+G F+DE LKH G++SMAN G +TNGSQFFI
Sbjct: 323 RFMIQGGD-PSGTGRGGQSIWGKPFKDEFCNPLKHDDRGIISMANRGKNTNGSQFFILYG 381
Query: 427 KTSWLDGRHVVFGNVVEGMEVVKQIE 504
LD +H +FG VV G+ V+ +E
Sbjct: 382 PAKHLDNKHTIFGRVVGGLNVLDALE 407
>SPBC16H5.05c |cyp7|cwf27|cyclophilin family peptidyl-prolyl
cis-trans isomerase Cyp7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 463
Score = 58.0 bits (134), Expect = 2e-09
Identities = 33/77 (42%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +1
Query: 247 PQFMLQGGDFTNHNGTGGKSIYGNKFEDENFT-LKHTGPGVLSMANAGADTNGSQFFITT 423
P+F++QGGD T G GG+SIYG F E L+ G++ MA + N SQFFIT
Sbjct: 59 PEFLIQGGDPTG-TGMGGESIYGEPFAVETHPRLRFIRRGLVGMACTENEGNNSQFFITL 117
Query: 424 VKTSWLDGRHVVFGNVV 474
T +G+ +FG VV
Sbjct: 118 GPTPEWNGKQTLFGRVV 134
Score = 42.3 bits (95), Expect = 9e-05
Identities = 25/57 (43%), Positives = 31/57 (54%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
G I IEL PK C NF LC +G+ Y G+I HRV+P +G PT T +G
Sbjct: 22 GDIQIELWCKEVPKACRNFIQLCL--EGY-YDGTIVHRVVPEFLI-QGGDPTGTGMG 74
>SPBC17G9.05 |rct1|cyp6|RRM-containing cyclophilin regulating
transcription Rct1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 432
Score = 33.1 bits (72), Expect = 0.052
Identities = 19/52 (36%), Positives = 26/52 (50%)
Frame = +2
Query: 116 DAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEG 271
+ +G +VI+L PKTCENF LC K Y F+ + N C+ G
Sbjct: 6 ETTVGDLVIDLFVKEAPKTCENFLKLC---KLKYYNFCPFYNIQHNYTCQTG 54
>SPBP8B7.07c |set6||histone lysine methyltransferase Set6
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 483
Score = 27.1 bits (57), Expect = 3.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = +2
Query: 104 VTVDDAPLGKIVIELRSDVTPKTCENFRALCT 199
V D+ P+GKI+I R D+ N C+
Sbjct: 19 VATDNIPIGKIIIRKRVDILSLDSANLTRTCS 50
>SPCC285.13c |||nucleoporin Nup60 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 736
Score = 26.6 bits (56), Expect = 4.5
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 263 KEGTSPTITALGESPSTAISLKTRISPLSTLDLASS 370
KE +P+ITA SP +A S + ISP + + +S
Sbjct: 334 KEKNTPSITAKAGSPQSAPSKASYISPYARPGITTS 369
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 26.6 bits (56), Expect = 4.5
Identities = 7/9 (77%), Positives = 8/9 (88%)
Frame = +3
Query: 399 WFPVLHHHC 425
WFP +HHHC
Sbjct: 97 WFPEVHHHC 105
>SPBC12C2.10c |pst1|SPBC21D10.01c|Clr6 histone deacetylase complex
subunit Pst1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1522
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/64 (29%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Frame = +2
Query: 137 VIELRSDVTPKTCENFRALCTGEKGFGYKG-SIFHRVIPNSCCKEGTSPTITALGESPST 313
++++ +D K E +A T G K SI+H+VI KE I L ++PS
Sbjct: 675 LLQIHADKMLKMSEVEKANWTLPSNLGGKSVSIYHKVIKKVYGKEHAQQIIENLQKNPSV 734
Query: 314 AISL 325
I +
Sbjct: 735 TIPI 738
>SPAC17D4.04 ||SPAC458.01|tRNA |Schizosaccharomyces pombe|chr
1|||Manual
Length = 654
Score = 26.2 bits (55), Expect = 6.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = -3
Query: 494 LTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCL 345
LT +P TTF T +P + +V ++++ PL+ + P PV L
Sbjct: 37 LTEQLP-TTFRITASIPHATQVRDYFIEHYYPLIENARTEDAKIPLPVSL 85
>SPAP7G5.06 |||amino acid permease, unknown 4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 583
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
Frame = +1
Query: 271 DFTNHNGTGGKSIYGNKFEDEN-FTLKHTGPGVLSMANAGADTNGSQFFI 417
D + T KS+YG +D+N F + T V+ ADT Q F+
Sbjct: 11 DLEKYPSTATKSVYGQSKDDKNVFDIHPTESEVIPGEVEYADTPSHQNFL 60
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,804,705
Number of Sequences: 5004
Number of extensions: 84573
Number of successful extensions: 284
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 428468660
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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