Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30779
(862 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase / c... 165 4e-41
At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase / c... 165 4e-41
At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase / c... 159 3e-39
At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase, cy... 157 9e-39
At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase, pu... 157 1e-38
At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase, pu... 157 1e-38
At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase, ch... 151 6e-37
At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase, pu... 150 1e-36
At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase cyc... 149 2e-36
At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase / c... 146 1e-35
At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase cyc... 134 7e-32
At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase cyc... 134 7e-32
At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase / c... 127 8e-30
At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase, pu... 123 1e-28
At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase, pu... 112 3e-25
At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase, pu... 111 8e-25
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 107 1e-23
At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase cyc... 93 2e-19
At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase cyc... 89 3e-18
At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase cyc... 87 1e-17
At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase, pu... 80 2e-15
At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase cyc... 77 1e-14
At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein, pu... 61 8e-10
At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase cyc... 43 2e-04
At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase cyc... 36 0.046
At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase cyc... 35 0.080
At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase cyc... 32 0.43
At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase cyc... 32 0.43
At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase cyc... 32 0.43
At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid t... 31 0.75
At5g07880.1 68418.m00908 SNAP25 homologous protein, putative / s... 30 1.7
At4g03030.1 68417.m00411 kelch repeat-containing F-box family pr... 30 1.7
At1g80080.1 68414.m09374 leucine-rich repeat family protein cont... 30 1.7
At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar ... 28 9.2
At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar ... 28 9.2
At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar ... 28 9.2
At1g72540.1 68414.m08388 protein kinase, putative similar to aux... 28 9.2
At1g23090.1 68414.m02887 sulfate transporter, putative similar t... 28 9.2
At1g06590.1 68414.m00698 expressed protein 28 9.2
>At4g38740.1 68417.m05487 peptidyl-prolyl cis-trans isomerase /
cyclophilin / rotamase / cyclosporin A-binding protein
(ROC1) identical to SP|P34790 Peptidyl-prolyl cis-trans
isomerase (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin)
(Cyclosporin A-binding protein) {Arabidopsis thaliana}
Length = 172
Score = 165 bits (400), Expect = 4e-41
Identities = 75/109 (68%), Positives = 87/109 (79%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM QGGDFT NGTGG+SIYG+KFEDENF KHTGPG+LSMANAGA
Sbjct: 53 LHFKGSKFHRVIPNFMCQGGDFTAGNGTGGESIYGSKFEDENFERKHTGPGILSMANAGA 112
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRPLR 537
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE + +S G+P +
Sbjct: 113 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKVGSSSGKPTK 161
Score = 90.6 bits (215), Expect = 1e-18
Identities = 42/72 (58%), Positives = 53/72 (73%), Gaps = 7/72 (9%)
Frame = +2
Query: 77 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 235
M+ P+V+FD+T+D P G+IV+EL +D TP+T ENFRALCTGEKG G +KGS F
Sbjct: 1 MAFPKVYFDMTIDGQPAGRIVMELYTDKTPRTAENFRALCTGEKGVGGTGKPLHFKGSKF 60
Query: 236 HRVIPNSCCKEG 271
HRVIPN C+ G
Sbjct: 61 HRVIPNFMCQGG 72
Score = 31.1 bits (67), Expect = 0.99
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 507 LGSQSGKTSKRIVIKDCGQIA 569
+GS SGK +K +V+ DCGQ++
Sbjct: 152 VGSSSGKPTKPVVVADCGQLS 172
>At2g21130.1 68415.m02507 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP2) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443757|gb|AAB71402; similar
to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34790
Length = 174
Score = 165 bits (400), Expect = 4e-41
Identities = 75/109 (68%), Positives = 86/109 (78%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM QGGDFT NGTGG+SIYG KFEDENF KHTGPG+LSMANAGA
Sbjct: 54 LHFKGSSFHRVIPNFMCQGGDFTKGNGTGGESIYGAKFEDENFERKHTGPGILSMANAGA 113
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRPLR 537
+TNGSQFFI TVKT WLDG+HVVFG VVEG++VVK IE + +S G+P +
Sbjct: 114 NTNGSQFFICTVKTDWLDGKHVVFGQVVEGLDVVKAIEKIGSSSGKPTK 162
Score = 91.9 bits (218), Expect = 5e-19
Identities = 45/71 (63%), Positives = 52/71 (73%), Gaps = 7/71 (9%)
Frame = +2
Query: 80 SLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFH 238
S P+VFFD+T+ AP GKIV+EL +D TPKT ENFRALCTGEKG G +KGS FH
Sbjct: 3 SHPKVFFDMTIGGAPAGKIVMELYTDKTPKTAENFRALCTGEKGVGRSGKPLHFKGSSFH 62
Query: 239 RVIPNSCCKEG 271
RVIPN C+ G
Sbjct: 63 RVIPNFMCQGG 73
Score = 31.5 bits (68), Expect = 0.75
Identities = 12/21 (57%), Positives = 17/21 (80%)
Frame = +3
Query: 507 LGSQSGKTSKRIVIKDCGQIA 569
+GS SGK +K +VI DCG+I+
Sbjct: 153 IGSSSGKPTKPVVIADCGEIS 173
>At2g29960.1 68415.m03644 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP5) / rotamase identical to cyclophilin
[Arabidopsis thaliana] gi|2443755|gb|AAB71401
Length = 201
Score = 159 bits (385), Expect = 3e-39
Identities = 74/107 (69%), Positives = 82/107 (76%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM+QGGDFT+ NG GG+SIYG KF DENF LKHTGPGVLSMAN+G
Sbjct: 81 LHYKGSKFHRIIPSFMIQGGDFTHGNGMGGESIYGQKFADENFKLKHTGPGVLSMANSGE 140
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
DTNGSQFFITTV TSWLDGRHVVFG VV+GM+VV +IE G P
Sbjct: 141 DTNGSQFFITTVTTSWLDGRHVVFGKVVQGMDVVYKIEAEGKQSGTP 187
Score = 70.5 bits (165), Expect = 1e-12
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 247
+V+FDV +D G++VI L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 33 KVYFDVEIDGKSAGRVVIGLFGKAVPKTAENFRALCTGEKGVGKSGKPLHYKGSKFHRII 92
Query: 248 PNSCCKEG 271
P+ + G
Sbjct: 93 PSFMIQGG 100
>At2g16600.1 68415.m01906 peptidyl-prolyl cis-trans isomerase,
cytosolic / cyclophilin / rotamase (ROC3) identical to
cytosolic cyclophilin [Arabidopsis thaliana] GI:1305455
Length = 173
Score = 157 bits (381), Expect = 9e-39
Identities = 72/106 (67%), Positives = 84/106 (79%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P+FM QGGDFT NGTGG+SIYG+KF+DENF KHTGPG+LSMANAGA
Sbjct: 54 LHYKGSSFHRVIPKFMCQGGDFTAGNGTGGESIYGSKFKDENFIKKHTGPGILSMANAGA 113
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGR 528
+TNGSQFFI T KTSWLDG+HVVFG VVEG+ VV+ IE + + GR
Sbjct: 114 NTNGSQFFICTEKTSWLDGKHVVFGQVVEGLNVVRDIEKVGSDSGR 159
Score = 81.8 bits (193), Expect = 5e-16
Identities = 39/69 (56%), Positives = 48/69 (69%), Gaps = 7/69 (10%)
Frame = +2
Query: 86 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRV 244
P+V+FD+TV G+IV+EL +D TP+T ENFRALCTGE+G G YKGS FHRV
Sbjct: 5 PKVYFDMTVGGKSAGRIVMELYADTTPETAENFRALCTGERGIGKQGKPLHYKGSSFHRV 64
Query: 245 IPNSCCKEG 271
IP C+ G
Sbjct: 65 IPKFMCQGG 73
Score = 34.7 bits (76), Expect = 0.080
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = +3
Query: 507 LGSQSGKTSKRIVIKDCGQIA 569
+GS SG+TSK +VI DCGQI+
Sbjct: 153 VGSDSGRTSKPVVIADCGQIS 173
>At5g58710.1 68418.m07355 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
(ROC7) similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 204
Score = 157 bits (380), Expect = 1e-38
Identities = 74/107 (69%), Positives = 80/107 (74%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FMLQGGDFT+ NG GG+SIYG KF DENF LKHTGPG LSMANAG
Sbjct: 84 LHYKGSSFHRIIPSFMLQGGDFTHGNGMGGESIYGEKFADENFKLKHTGPGFLSMANAGQ 143
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
DTNGSQFFITTV TSWLDGRHVVFG VV GM+VV ++E G P
Sbjct: 144 DTNGSQFFITTVTTSWLDGRHVVFGKVVTGMDVVYKVEAEGNQSGTP 190
Score = 70.1 bits (164), Expect = 2e-12
Identities = 35/68 (51%), Positives = 43/68 (63%), Gaps = 7/68 (10%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 247
+V+FDV +D G+IV+ L PKT ENFRALCTGEKG G YKGS FHR+I
Sbjct: 36 KVYFDVEIDGKAAGRIVMGLFGKTVPKTVENFRALCTGEKGIGKNGKALHYKGSSFHRII 95
Query: 248 PNSCCKEG 271
P+ + G
Sbjct: 96 PSFMLQGG 103
>At3g56070.1 68416.m06231 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Catharanthus roseus] SWISS-PROT:Q39613
Length = 176
Score = 157 bits (380), Expect = 1e-38
Identities = 71/107 (66%), Positives = 83/107 (77%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM QGGDFT NGTGG+SIYG+KFEDENF LKHTGPG+LSMAN+G
Sbjct: 53 LHYKGSAFHRIIPGFMCQGGDFTRGNGTGGESIYGSKFEDENFKLKHTGPGILSMANSGP 112
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
+TNGSQFFI T KTSWLDG+HVVFG VV+G VVK +E + + +G P
Sbjct: 113 NTNGSQFFICTEKTSWLDGKHVVFGKVVDGYNVVKAMEDVGSDMGNP 159
Score = 80.6 bits (190), Expect = 1e-15
Identities = 37/72 (51%), Positives = 48/72 (66%), Gaps = 7/72 (9%)
Frame = +2
Query: 77 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 235
M+ P+VFFD+ + G++V+EL +DVTP+T NFRALCTGE G G YKGS F
Sbjct: 1 MANPKVFFDILIGKMKAGRVVMELFADVTPRTANNFRALCTGENGIGKAGKALHYKGSAF 60
Query: 236 HRVIPNSCCKEG 271
HR+IP C+ G
Sbjct: 61 HRIIPGFMCQGG 72
Score = 31.5 bits (68), Expect = 0.75
Identities = 11/21 (52%), Positives = 17/21 (80%)
Frame = +3
Query: 504 DLGSQSGKTSKRIVIKDCGQI 566
D+GS G S+R+VI+DCG++
Sbjct: 151 DVGSDMGNPSERVVIEDCGEL 171
>At3g62030.1 68416.m06967 peptidyl-prolyl cis-trans isomerase,
chloroplast / cyclophilin / rotamase / cyclosporin
A-binding protein (ROC4) identical to peptidyl-prolyl
cis-trans isomerase, chloroplast precursor, PPIase
(cyclophilin, cyclosporin A-binding protein)
[Arabidopsis thaliana] SWISS-PROT:P34791; identical to
cDNA nuclear-encoded chloroplast stromal cyclophilin
(ROC4) GI:405130
Length = 260
Score = 151 bits (366), Expect = 6e-37
Identities = 68/96 (70%), Positives = 79/96 (82%)
Frame = +1
Query: 220 QGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 399
+G F FM+QGGDFT NGTGG SIYG KFEDENFTLKHTGPG+LSMANAG +TN
Sbjct: 140 KGSSFHRIIKDFMIQGGDFTEGNGTGGISIYGAKFEDENFTLKHTGPGILSMANAGPNTN 199
Query: 400 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIET 507
GSQFFI TVKTSWLD +HVVFG V+EGM++V+ +E+
Sbjct: 200 GSQFFICTVKTSWLDNKHVVFGQVIEGMKLVRTLES 235
Score = 73.7 bits (173), Expect = 1e-13
Identities = 33/61 (54%), Positives = 43/61 (70%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKE 268
+V+FDV + G+IV+ L +V PKT ENFRALCTGEK +GYKGS FHR+I + +
Sbjct: 96 KVYFDVEIGGEVAGRIVMGLFGEVVPKTVENFRALCTGEKKYGYKGSSFHRIIKDFMIQG 155
Query: 269 G 271
G
Sbjct: 156 G 156
>At3g55920.1 68416.m06214 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 228
Score = 150 bits (364), Expect = 1e-36
Identities = 70/107 (65%), Positives = 80/107 (74%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM+QGGDFT +G GG+SIYG+KF DENF LKHTGPG LSMAN+G
Sbjct: 108 LYFKGSSFHRIIPGFMIQGGDFTRGDGRGGESIYGDKFADENFKLKHTGPGFLSMANSGP 167
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
D+NGSQFFITTV TSWLDG HVVFG V+ GMEVV++IE G P
Sbjct: 168 DSNGSQFFITTVTTSWLDGHHVVFGKVLSGMEVVRKIEAQGQDSGVP 214
Score = 70.5 bits (165), Expect = 1e-12
Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 7/68 (10%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIFHRVI 247
+V+FD+ ++ +P G+I+I L ++ PKT ENFR+LCTGEKG G +KGS FHR+I
Sbjct: 60 KVYFDIQINGSPAGRILIGLFGNIVPKTAENFRSLCTGEKGVGNMGKPLYFKGSSFHRII 119
Query: 248 PNSCCKEG 271
P + G
Sbjct: 120 PGFMIQGG 127
>At5g13120.1 68418.m01503 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 259
Score = 149 bits (362), Expect = 2e-36
Identities = 69/97 (71%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 432
FM+QGGDF NGTGGKS+YG F+DENF L H GPGVLSMANAG +TNGSQFFI T+KT
Sbjct: 149 FMIQGGDFEKGNGTGGKSVYGRTFKDENFKLSHVGPGVLSMANAGPNTNGSQFFICTIKT 208
Query: 433 SWLDGRHVVFGNVVEGMEVVKQIETLAASLG-RPLRE 540
SWLDGRHVVFG V+EGMEVVK IE G RP ++
Sbjct: 209 SWLDGRHVVFGQVIEGMEVVKLIEEQETDRGDRPRKK 245
Score = 73.7 bits (173), Expect = 1e-13
Identities = 37/57 (64%), Positives = 44/57 (77%), Gaps = 4/57 (7%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGK----IVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 247
+V+FD++V + P+GK IVI L D P+T ENFRALCTGEKGFGYKGS FHRVI
Sbjct: 91 KVYFDISVGN-PVGKLAGRIVIGLYGDDVPQTVENFRALCTGEKGFGYKGSTFHRVI 146
>At4g34870.1 68417.m04946 peptidyl-prolyl cis-trans isomerase /
cyclophilin (CYP1) / rotamase identical to cyclophilin
(CYP1) gi|992643|gb|AAA75512; similar to peptidyl-prolyl
cis-trans isomerase, PPIase (cyclophilin, cyclosporin
A-binding protein) [Catharanthus roseus]
SWISS-PROT:Q39613
Length = 172
Score = 146 bits (355), Expect = 1e-35
Identities = 68/106 (64%), Positives = 81/106 (76%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F P FM QGGDFT NGTGG+SIYG KF+DENF KHTG G+LSMAN+G
Sbjct: 53 LHFKGSIFHRVIPGFMCQGGDFTAKNGTGGESIYGAKFKDENFIKKHTGAGILSMANSGP 112
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGR 528
+TNGSQFFI T KTSWLDG+HVVFG VV+G++VVK IE + + G+
Sbjct: 113 NTNGSQFFICTDKTSWLDGKHVVFGQVVKGLDVVKAIEKVGSDSGK 158
Score = 87.8 bits (208), Expect = 8e-18
Identities = 42/72 (58%), Positives = 51/72 (70%), Gaps = 7/72 (9%)
Frame = +2
Query: 77 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 235
MS PRVFFD+++ P+G+I +EL +D TP T ENFRALCTGEKG G +KGSIF
Sbjct: 1 MSNPRVFFDMSLSGTPIGRIEMELFADTTPNTAENFRALCTGEKGMGKLGKPLHFKGSIF 60
Query: 236 HRVIPNSCCKEG 271
HRVIP C+ G
Sbjct: 61 HRVIPGFMCQGG 72
Score = 33.1 bits (72), Expect = 0.24
Identities = 13/21 (61%), Positives = 17/21 (80%)
Frame = +3
Query: 507 LGSQSGKTSKRIVIKDCGQIA 569
+GS SGKTSK + I DCGQ++
Sbjct: 152 VGSDSGKTSKVVTITDCGQLS 172
>At3g63400.2 68416.m07138 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 387
Score = 134 bits (324), Expect = 7e-32
Identities = 64/107 (59%), Positives = 75/107 (70%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E + S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = +2
Query: 74 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 229
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 230 IFHRVIPNSCCKEG 271
FHRVI + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At3g63400.1 68416.m07137 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to cyclophylin
[Digitalis lanata] GI:1563719; contains Pfam profile
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type; contains AT-donor splice site at
intron 9
Length = 570
Score = 134 bits (324), Expect = 7e-32
Identities = 64/107 (59%), Positives = 75/107 (70%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F FM QGGDF+N NGTGG+SIYG KF DENF L H G GVLSMAN G
Sbjct: 57 LHFKGSSFHRVIKGFMAQGGDFSNGNGTGGESIYGGKFSDENFRLDHDGAGVLSMANCGP 116
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
+TNGSQFFI + LDG+HVVFG VVEGM V+K++E + S G+P
Sbjct: 117 NTNGSQFFILFKRQPHLDGKHVVFGKVVEGMAVIKKMELVGTSDGKP 163
Score = 70.9 bits (166), Expect = 1e-12
Identities = 38/74 (51%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = +2
Query: 74 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 229
K P VF DV++ P+ +IVIEL +DV PKT ENFRALCTGE G G +KGS
Sbjct: 3 KKKNPNVFLDVSIGGDPVQRIVIELFADVVPKTAENFRALCTGEAGVGKSTGKPLHFKGS 62
Query: 230 IFHRVIPNSCCKEG 271
FHRVI + G
Sbjct: 63 SFHRVIKGFMAQGG 76
>At2g15790.1 68415.m01810 peptidyl-prolyl cis-trans isomerase /
cyclophilin-40 (CYP40) / rotamase identical to
cyclophilin-40 [Arabidopsis thaliana] GI:13442983;
supporting cDNA gi|13442982|gb|AY026065.1|
Length = 361
Score = 127 bits (307), Expect = 8e-30
Identities = 60/98 (61%), Positives = 74/98 (75%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F FM+QGGD + ++GTGG+SIYG KF+DENF LKH G+LSMAN+G
Sbjct: 54 LHYKGNRFHRVIKGFMIQGGDISANDGTGGESIYGLKFDDENFELKHERKGMLSMANSGP 113
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 504
+TNGSQFFITT +TS LDG+HVVFG V +GM VV+ IE
Sbjct: 114 NTNGSQFFITTTRTSHLDGKHVVFGRVTKGMGVVRSIE 151
Score = 65.3 bits (152), Expect = 5e-11
Identities = 34/65 (52%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Frame = +2
Query: 77 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGSI 232
M + F D+++ G+IVIEL DV PKT ENFR LCTGEKG G YKG+
Sbjct: 1 MGRSKCFMDISIGGELEGRIVIELYDDVVPKTAENFRLLCTGEKGLGPNTGVPLHYKGNR 60
Query: 233 FHRVI 247
FHRVI
Sbjct: 61 FHRVI 65
>At2g38730.1 68415.m04756 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Homo sapiens]
gi|3647230|gb|AAC60793
Length = 199
Score = 123 bits (297), Expect = 1e-28
Identities = 55/88 (62%), Positives = 71/88 (80%), Gaps = 1/88 (1%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKT 432
FM+Q GDF ++G+G SIYG+KFEDENFT KHTGPG+LSMAN+G +TNG QFFIT K
Sbjct: 93 FMVQSGDFLKNDGSGCMSIYGHKFEDENFTAKHTGPGLLSMANSGPNTNGCQFFITCAKC 152
Query: 433 SWLDGRHVVFGNVV-EGMEVVKQIETLA 513
WLD +HVVFG V+ +G+ V+++IE +A
Sbjct: 153 DWLDNKHVVFGRVLGDGLLVMRKIENVA 180
Score = 65.7 bits (153), Expect = 4e-11
Identities = 33/67 (49%), Positives = 41/67 (61%), Gaps = 5/67 (7%)
Frame = +2
Query: 86 PRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGE-----KGFGYKGSIFHRVIP 250
P VFFDV++ P G+I +EL +D+ PKT ENFR CTGE K GYK FHRVI
Sbjct: 32 PVVFFDVSIGGIPAGRIKMELFADIAPKTAENFRQFCTGELRKAGKPLGYKECQFHRVIK 91
Query: 251 NSCCKEG 271
+ + G
Sbjct: 92 DFMVQSG 98
>At2g36130.1 68415.m04436 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
contains Pfam domain, PF00160: peptidyl-prolyl cis-trans
isomerase, cyclophilin-type
Length = 164
Score = 112 bits (269), Expect = 3e-25
Identities = 56/98 (57%), Positives = 71/98 (72%), Gaps = 2/98 (2%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 429
F++QGGD T G GG+SIYG+KFEDE N LKHTG G+LSMANAG +TNGSQFFIT
Sbjct: 58 FIVQGGDPTG-TGRGGESIYGSKFEDEINKELKHTGAGILSMANAGPNTNGSQFFITLAP 116
Query: 430 TSWLDGRHVVFGNVVEGMEVVKQIETLAA-SLGRPLRE 540
LDG+H +FG V GMEV+K++ ++ + RP+ E
Sbjct: 117 QPSLDGKHTIFGRVCRGMEVIKRLGSVQTDNTDRPIHE 154
Score = 34.3 bits (75), Expect = 0.11
Identities = 20/66 (30%), Positives = 36/66 (54%)
Frame = +2
Query: 101 DVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSP 280
+VT++ + +G +E+ +P+TC NF L +G+ Y +FHR++ + +G P
Sbjct: 11 EVTLETS-MGPFTVEMYYKHSPRTCRNFLEL--SRRGY-YDNVLFHRIVKDFIV-QGGDP 65
Query: 281 TITALG 298
T T G
Sbjct: 66 TGTGRG 71
>At4g34960.1 68417.m04955 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to cyclophilin [Arabidopsis thaliana]
gi|2443755|gb|AAB71401
Length = 224
Score = 111 bits (266), Expect = 8e-25
Identities = 53/111 (47%), Positives = 73/111 (65%), Gaps = 1/111 (0%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGA 390
L +G F F++QGGD + +G SIYG F DENF ++H+ G+++MAN G
Sbjct: 96 LHYKGTPFHRIISGFVIQGGDIIHGDGKSSDSIYGGTFPDENFKIQHSHAGMVAMANTGP 155
Query: 391 DTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAASL-GRPLRE 540
D+NGSQFFITTVK SWL+G HVV G V++GM+ V IE A + G+P ++
Sbjct: 156 DSNGSQFFITTVKASWLEGEHVVLGKVIQGMDNVFAIEGGAGTYSGKPRKK 206
Score = 66.5 bits (155), Expect = 2e-11
Identities = 35/60 (58%), Positives = 39/60 (65%), Gaps = 7/60 (11%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKG-------FGYKGSIFHRVI 247
RVF DV +D LG+IVI L V PKT ENFRALCTGEKG YKG+ FHR+I
Sbjct: 48 RVFLDVDIDGQRLGRIVIGLYGTVVPKTVENFRALCTGEKGKTSSGKPLHYKGTPFHRII 107
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 107 bits (256), Expect = 1e-23
Identities = 53/85 (62%), Positives = 66/85 (77%), Gaps = 1/85 (1%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 429
FM+Q GD +GTGG+SI+G +FEDE + +L+H P LSMANAG +TNGSQFFITTV
Sbjct: 524 FMIQTGDPLG-DGTGGQSIWGREFEDEFHKSLRHDRPFTLSMANAGPNTNGSQFFITTVA 582
Query: 430 TSWLDGRHVVFGNVVEGMEVVKQIE 504
T WLD +H VFG VV+GM+VV+ IE
Sbjct: 583 TPWLDNKHTVFGRVVKGMDVVQGIE 607
Score = 31.9 bits (69), Expect = 0.56
Identities = 18/41 (43%), Positives = 23/41 (56%)
Frame = +2
Query: 125 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVI 247
LG I ++L + PKT ENF C G+ Y +FHRVI
Sbjct: 484 LGDIHMKLYPEECPKTVENFTTHC--RNGY-YDNHLFHRVI 521
>At1g01940.1 68414.m00112 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 160
Score = 93.1 bits (221), Expect = 2e-19
Identities = 50/98 (51%), Positives = 62/98 (63%), Gaps = 2/98 (2%)
Frame = +1
Query: 253 FMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGADTNGSQFFITTVK 429
FM+QGGD G GG SI+G KF DE +LKH G+LSMAN+G +TNGSQFFIT K
Sbjct: 49 FMIQGGD-PKGTGKGGTSIWGKKFNDEIRDSLKHNARGMLSMANSGPNTNGSQFFITYAK 107
Query: 430 TSWLDGRHVVFGNVVEGMEVVKQIETLAASLG-RPLRE 540
L+G + +FG V+ G EV+ +E G RPL E
Sbjct: 108 QPHLNGLYTIFGKVIHGFEVLDIMEKTQTGPGDRPLAE 145
Score = 38.3 bits (85), Expect = 0.007
Identities = 25/58 (43%), Positives = 30/58 (51%)
Frame = +2
Query: 125 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
LG I E+ D PK+ ENF ALC G+ Y G+IFHR I +G P T G
Sbjct: 9 LGDIKCEIFCDEVPKSAENFLALCA--SGY-YDGTIFHRNIKGFMI-QGGDPKGTGKG 62
>At5g67530.1 68418.m08515 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 595
Score = 89.4 bits (212), Expect = 3e-18
Identities = 51/114 (44%), Positives = 67/114 (58%), Gaps = 2/114 (1%)
Frame = +1
Query: 205 ERLRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMAN 381
ER G+ F FM+QGGD T G GG+SI+G F+DE N L H+G GV+SMAN
Sbjct: 376 ERGYYNGVAFHRSIRNFMIQGGDPTG-TGKGGESIWGKPFKDEPNSKLLHSGRGVVSMAN 434
Query: 382 AGADTNGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIETLAA-SLGRPLRE 540
+G TNGSQFF+ + L+ +H VFG VV G+ + +E + RPL E
Sbjct: 435 SGPHTNGSQFFVLYKSATHLNYKHTVFGGVVGGLATLAAMENVPVDESDRPLEE 488
Score = 46.4 bits (105), Expect = 2e-05
Identities = 26/57 (45%), Positives = 32/57 (56%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
G + IEL D+ P+ CENF LC E+G+ Y G FHR I N +G PT T G
Sbjct: 353 GDLNIELHCDIAPRACENFITLC--ERGY-YNGVAFHRSIRNFMI-QGGDPTGTGKG 405
>At4g32420.1 68417.m04615 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein weak similarity to
CARS-Cyp [Homo sapiens] GI:1117968; contains Pfam
profile PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 837
Score = 87.4 bits (207), Expect = 1e-17
Identities = 42/90 (46%), Positives = 56/90 (62%)
Frame = +1
Query: 262 QGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTNGSQFFITTVKTSWL 441
Q GDF N NGT G+SIY KF DE+ L+H G+LSM+ A D GS F IT L
Sbjct: 74 QAGDFVNRNGTAGESIYAGKFPDESPKLRHEETGLLSMSIADRDKFGSHFHITFRPNQQL 133
Query: 442 DGRHVVFGNVVEGMEVVKQIETLAASLGRP 531
D +VVFG +++G E++K+IE + G+P
Sbjct: 134 DRNNVVFGKLIQGKEILKKIERVGDEEGKP 163
Score = 72.9 bits (171), Expect = 2e-13
Identities = 37/74 (50%), Positives = 45/74 (60%), Gaps = 8/74 (10%)
Frame = +2
Query: 74 KMSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG--------YKGS 229
K P+VF DV++D P +V EL +V PKT ENFRALCTGEKG G YKGS
Sbjct: 3 KKKNPQVFMDVSIDGDPAETMVFELFPEVAPKTSENFRALCTGEKGIGPRSGKPLHYKGS 62
Query: 230 IFHRVIPNSCCKEG 271
FHR++ S + G
Sbjct: 63 FFHRIMKGSSAQAG 76
>At3g22920.1 68416.m02888 peptidyl-prolyl cis-trans isomerase,
putative / cyclophilin, putative / rotamase, putative
similar to peptidyl-prolyl cis-trans isomerase PPIase
(cyclophilin, cyclosporin A-binding protein) [Tomato]
SWISS-PROT:P21568
Length = 232
Score = 80.2 bits (189), Expect = 2e-15
Identities = 37/66 (56%), Positives = 48/66 (72%), Gaps = 7/66 (10%)
Frame = +2
Query: 77 MSLPRVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFG-------YKGSIF 235
M+ P+VFFD+TVD P G+IVIEL +D+TP+T ENFR LCTGE+G G YKGS F
Sbjct: 1 MANPKVFFDLTVDGKPAGRIVIELFADLTPRTAENFRGLCTGERGIGKCGKPIHYKGSTF 60
Query: 236 HRVIPN 253
++P+
Sbjct: 61 DHIVPD 66
Score = 60.5 bits (140), Expect = 1e-09
Identities = 39/100 (39%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Frame = +1
Query: 211 LRLQGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHT-GPGVLSMANAG 387
+ +G F P M GGD N + I+ + +DE F L H GPG++SMA
Sbjct: 53 IHYKGSTFDHIVPDLMWCGGDIIFEN----EPIHSEELDDEYFILNHEDGPGIISMA--- 105
Query: 388 ADTNGSQFFITTVKTSW-LDGRHVVFGNVVEGMEVVKQIE 504
D+NGSQF I +DG HVV G VVEG+++++ IE
Sbjct: 106 -DSNGSQFQIHMKDYGLQVDGDHVVIGKVVEGLDLMRNIE 144
>At4g33060.1 68417.m04709 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 504
Score = 77.4 bits (182), Expect = 1e-14
Identities = 39/77 (50%), Positives = 53/77 (68%), Gaps = 2/77 (2%)
Frame = +1
Query: 247 PQFMLQGGDFTNHNGTGGKSIYGNKFEDE-NFTLKHTGPGVLSMANAGA-DTNGSQFFIT 420
P F++QGGD T +GTGG SIYG F DE + L+ + G+++MANA + ++NGSQFF T
Sbjct: 59 PGFLVQGGDPTG-SGTGGDSIYGGVFADEFHSRLRFSHRGIVAMANASSPNSNGSQFFFT 117
Query: 421 TVKTSWLDGRHVVFGNV 471
K WLD +H +FG V
Sbjct: 118 LDKCDWLDKKHTIFGKV 134
Score = 34.3 bits (75), Expect = 0.11
Identities = 22/57 (38%), Positives = 30/57 (52%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
G I +EL PK+ NF LC +G+ + +IFHRVIP +G PT + G
Sbjct: 22 GPIDVELWPKEAPKSVRNFVQLCL--EGY-FDNTIFHRVIPGFLV-QGGDPTGSGTG 74
>At1g53720.1 68414.m06113 cyclophilin-RNA interacting protein,
putative
Length = 506
Score = 61.3 bits (142), Expect = 8e-10
Identities = 45/133 (33%), Positives = 66/133 (49%), Gaps = 16/133 (12%)
Frame = +1
Query: 187 CPVHWRERLRL------QGLHFPSCHPQFMLQGGDFTNHNGTGGKSIY----GNK---FE 327
CP+ + L+L G F + F Q GD T G GG SIY G + ++
Sbjct: 21 CPLTCKNFLKLCKIKYYNGCLFHTVQKDFTAQTGDPTG-TGAGGDSIYKFLYGEQARFYK 79
Query: 328 DE-NFTLKHTGPGVLSMANAGADTNGSQFFIT-TVKTSWLDGRHVVFGNVVEGMEVVKQI 501
DE + LKH+ G ++MA+ G + N SQF+ T +LDG+H VFG + EG + + +I
Sbjct: 80 DEIHLDLKHSKTGTVAMASGGENLNASQFYFTLRDDLDYLDGKHTVFGQIAEGFDTLTRI 139
Query: 502 -ETLAASLGRPLR 537
E RP +
Sbjct: 140 NEAYVDPKNRPYK 152
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/58 (44%), Positives = 31/58 (53%)
Frame = +2
Query: 125 LGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALG 298
LG IVI+L SD P TC+NF LC K Y G +FH V + + G PT T G
Sbjct: 9 LGDIVIDLHSDKCPLTCKNFLKLC---KIKYYNGCLFHTVQKDFTAQTG-DPTGTGAG 62
>At1g74070.1 68414.m08579 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 317
Score = 43.2 bits (97), Expect = 2e-04
Identities = 17/54 (31%), Positives = 31/54 (57%)
Frame = +2
Query: 89 RVFFDVTVDDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIP 250
+ F DV++D P+G+I+I L D P F ++ +G+ G Y+ F +++P
Sbjct: 93 KAFIDVSIDGEPIGRIIIGLYGDDVPAGTARFSSIVSGKAGITYRRKDFVKIMP 146
Score = 32.7 bits (71), Expect = 0.32
Identities = 15/35 (42%), Positives = 24/35 (68%)
Frame = +1
Query: 397 NGSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQI 501
NG++F IT V + L+ +V G V+EGM VV+++
Sbjct: 230 NGTEFVITAVDSPELEDSVLVIGKVLEGMGVVEKM 264
>At5g35100.1 68418.m04153 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 290
Score = 35.5 bits (78), Expect = 0.046
Identities = 23/91 (25%), Positives = 37/91 (40%)
Frame = +2
Query: 113 DDAPLGKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITA 292
D PLG++V+ L P T F+ +CT YK + H++ P G
Sbjct: 81 DSTPLGRVVLGLYGRHVPITVSTFKRMCT-SSSTSYKNTPVHKIFPGQYFLAGRQ----G 135
Query: 293 LGESPSTAISLKTRISPLSTLDLASSPWLMP 385
G + + R P +T + S +L+P
Sbjct: 136 GGRRDTAEVGYSLRDLPRNTDVVNSKAFLLP 166
Score = 33.5 bits (73), Expect = 0.18
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 2/42 (4%)
Frame = +1
Query: 391 DTNGSQFFITTVK--TSWLDGRHVVFGNVVEGMEVVKQIETL 510
D +F ITT + LDG ++VFG V+EG++VV I ++
Sbjct: 191 DYRNVEFLITTGPGPSPQLDGGNIVFGTVLEGLDVVTSISSI 232
>At2g47320.1 68415.m05907 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 230
Score = 34.7 bits (76), Expect = 0.080
Identities = 24/95 (25%), Positives = 44/95 (46%)
Frame = +1
Query: 220 QGLHFPSCHPQFMLQGGDFTNHNGTGGKSIYGNKFEDENFTLKHTGPGVLSMANAGADTN 399
+G F F++Q GD + ++ + +LKH ++ A +
Sbjct: 115 KGFLFSRVVKHFVIQAGDSAEFDAVKDWALDRKNIDT---SLKHE-EFMVGTPKAKNEQG 170
Query: 400 GSQFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 504
G +FFI + + L+ + VFG V +G +VV++IE
Sbjct: 171 GFEFFIVSAQIKDLNEKLTVFGRVSKGQDVVQEIE 205
>At3g66654.3 68416.m00779 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPT 283
G I +EL + +P+ + F LC + +KG F RVI N + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 406 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 504
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.2 68416.m00778 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPT 283
G I +EL + +P+ + F LC + +KG F RVI N + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 406 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 504
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At3g66654.1 68416.m00777 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein contains Pfam domain,
PF00160: peptidyl-prolyl cis-trans isomerase,
cyclophilin-type
Length = 236
Score = 32.3 bits (70), Expect = 0.43
Identities = 18/52 (34%), Positives = 27/52 (51%)
Frame = +2
Query: 128 GKIVIELRSDVTPKTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPT 283
G I +EL + +P+ + F LC + +KG F RVI N + G SP+
Sbjct: 90 GLITVELFKEGSPEVVDKFLDLCQKDH---FKGMPFQRVIKNYLVQAGHSPS 138
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/33 (39%), Positives = 22/33 (66%)
Frame = +1
Query: 406 QFFITTVKTSWLDGRHVVFGNVVEGMEVVKQIE 504
+ ITT L+ + +VFG V++G +VV++IE
Sbjct: 179 ELLITTAPIPDLNDQLIVFGRVLKGEDVVQEIE 211
>At4g14805.1 68417.m02276 protease inhibitor/seed storage/lipid
transfer protein (LTP)-related weak hit to Pfam PF00234:
Protease inhibitor/seed storage/LTP family
Length = 219
Score = 31.5 bits (68), Expect = 0.75
Identities = 21/60 (35%), Positives = 32/60 (53%)
Frame = -3
Query: 503 SICLTTSMPSTTFPKTTCLPSSQEVLTVVMKNWEPLVSAPALAMERTPGPVCLRVKFSSS 324
++ T PS++ P TC ++E+ V+ P VS+P M TP P+C V F+SS
Sbjct: 22 AVTATQQAPSSSPPVLTC---TEEL--VMFSPCLPYVSSPPNNMSETPDPICCSV-FTSS 75
>At5g07880.1 68418.m00908 SNAP25 homologous protein, putative /
synaptosomal-associated protein SNAP25-like, putative
(SNAP29) identical to Swiss-Prot:Q9SD96 SNAP25
homologous protein SNAP29
(AtSNAP29)(Synaptosomal-associated protein SNAP25-like
2) [Arabidopsis thaliana]; contains Pfam profile:
PF05739 SNARE domain
Length = 251
Score = 30.3 bits (65), Expect = 1.7
Identities = 22/57 (38%), Positives = 26/57 (45%), Gaps = 1/57 (1%)
Frame = +2
Query: 167 KTCENFRALCTGEKGFGYKGSIFHRVIPNSCCKEGTSPTITALGESPS-TAISLKTR 334
KT + L GEK G G +F R + T P IT G+SP I LKTR
Sbjct: 106 KTVDLDHHLSRGEKILGRLGGVFSRTWKPKKSRSITGPVITK-GDSPKRKVIDLKTR 161
>At4g03030.1 68417.m00411 kelch repeat-containing F-box family
protein contains Pfam profiles PF01344: Kelch motif,
PF00646: F-box domain
Length = 442
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = -2
Query: 324 KLIAVDGLSPSAVMVGEVPSLQHELGMTRWKMEPL*PK 211
K++AVD P M+ + L++E+G+ RW+ E PK
Sbjct: 325 KIVAVDCGKPVFFMLDKDWILRYEMGLNRWRKESSVPK 362
>At1g80080.1 68414.m09374 leucine-rich repeat family protein
contains leucine rich-repeat domains Pfam:PF00560,
INTERPRO:IPR001611; contains some similarity to Hcr2-5D
[Lycopersicon esculentum] gi|3894393|gb|AAC78596
Length = 496
Score = 30.3 bits (65), Expect = 1.7
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -2
Query: 846 YLGPKPDRLANLVGIKIV-IGKNATNGT 766
+LGP PD L NL +K++ + KN NG+
Sbjct: 171 FLGPIPDELGNLTNLKVLDLHKNHLNGS 198
>At5g18620.2 68418.m02206 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1072
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +2
Query: 650 SPVKNNLNEIWVIPNYLI 703
+P++NNL+E+W + N+L+
Sbjct: 352 TPLQNNLHELWALLNFLL 369
>At5g18620.1 68418.m02205 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1069
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +2
Query: 650 SPVKNNLNEIWVIPNYLI 703
+P++NNL+E+W + N+L+
Sbjct: 352 TPLQNNLHELWALLNFLL 369
>At3g06400.1 68416.m00738 DNA-dependent ATPase, putative similar to
DNA-dependent ATPase SNF2H [Mus musculus] GI:14028669;
contains Pfam profiles PF00271: Helicase conserved
C-terminal domain, PF00176: SNF2 family N-terminal
domain, PF00249: Myb-like DNA-binding domain
Length = 1055
Score = 27.9 bits (59), Expect = 9.2
Identities = 8/18 (44%), Positives = 16/18 (88%)
Frame = +2
Query: 650 SPVKNNLNEIWVIPNYLI 703
+P++NNL+E+W + N+L+
Sbjct: 347 TPLQNNLHELWALLNFLL 364
>At1g72540.1 68414.m08388 protein kinase, putative similar to
auxin-regulated dual specificity cytosolic kinase
[Lycopersicon esculentum] gi|14484938|gb|AAK62821;
similar to serine/threonine protein kinase
gi|1066501|gb|AAA81538
Length = 450
Score = 27.9 bits (59), Expect = 9.2
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +3
Query: 60 LLIPAKCLYHEYSSTSLLTMPHWEKLLLS*EVTSLPRRVKTS 185
+ +P C+ + + T P EKLLL TS+P RV S
Sbjct: 8 ICLPISCINNTNQKKTTTTNPPKEKLLLLSRQTSVPSRVYMS 49
>At1g23090.1 68414.m02887 sulfate transporter, putative similar to
sulfate transporter [Arabidopsis thaliana] GI:2285885;
contains Pfam profiles PF00916: Sulfate transporter
family, PF01740: STAS domain
Length = 631
Score = 27.9 bits (59), Expect = 9.2
Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 4/82 (4%)
Frame = +1
Query: 271 DFTNHNG-TGGKSIYGNKFEDENFTLKHTGPGVLSM---ANAGADTNGSQFFITTVKTSW 438
+F N N T S + + E+E KH+ L + A +G DTNG FF KT+
Sbjct: 517 NFANSNYLTERTSRWIEECEEEEAQEKHSSLQFLILEMSAVSGVDTNGVSFFKELKKTTA 576
Query: 439 LDGRHVVFGNVVEGMEVVKQIE 504
+VF N + EVV++++
Sbjct: 577 KKDIELVFVNPLS--EVVEKLQ 596
>At1g06590.1 68414.m00698 expressed protein
Length = 916
Score = 27.9 bits (59), Expect = 9.2
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Frame = +2
Query: 212 FGYKGSIFHRVIPNSCCKE-GTSPTITALGESPSTAISLKTRISPLSTLDLASSPWLMPV 388
FG K S+ H+ P S CKE + + S S+ +++ +S DL PW PV
Sbjct: 492 FGPKASMRHKTCPVSVCKEIRLGAHLISDFSSESSTMTIDGSLSSAWLKDL-QKPWGPPV 550
Query: 389 L 391
+
Sbjct: 551 I 551
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,169,106
Number of Sequences: 28952
Number of extensions: 462440
Number of successful extensions: 1297
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1180
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1270
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2009406400
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -