Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30778
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           30   0.075
EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calc...    27   0.92 
AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein p...    25   2.1  
AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein p...    25   2.8  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   6.5  
AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic acetylch...    23   8.6  

>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 30.3 bits (65), Expect = 0.075
 Identities = 20/63 (31%), Positives = 27/63 (42%)
 Frame = +1

Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMWHFGAKV 462
           H+  VI V ++     LA+ D SG+I VW   +G     L  +       F   H G   
Sbjct: 63  HRSDVILVKWNEPYQKLASCDSSGIIFVWIKYEGRWSVELINDRNTPVTHFSWSHDGRMA 122

Query: 463 LIC 471
           LIC
Sbjct: 123 LIC 125


>EF595743-1|ABQ88369.1| 1893|Anopheles gambiae voltage-gated calcium
            channel alpha1 subunit protein.
          Length = 1893

 Score = 26.6 bits (56), Expect = 0.92
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +1

Query: 739  GKVILTTTNHGENSW*TCKPENGSRNC 819
            G VI+T  N GE  +  C  +   RNC
Sbjct: 1119 GFVIVTFQNEGEQEYKNCDLDKNQRNC 1145


>AJ416109-1|CAC94781.1|  234|Anopheles gambiae PROSAg25 protein
           protein.
          Length = 234

 Score = 25.4 bits (53), Expect = 2.1
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +1

Query: 430 SFGMWHFGAKVLICGAVSGDIYIFKILPA 516
           S G+  FG  +LICG   G  Y+F+  P+
Sbjct: 124 SGGVRPFGVSLLICGWDDGRPYLFQCDPS 152


>AB090812-1|BAC57899.1|  541|Anopheles gambiae gag-like protein
           protein.
          Length = 541

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = +1

Query: 451 GAKVLICGAVSGDIYIFKILPAKLKCFR 534
           G+K+ +CG +S    + K  P + +C+R
Sbjct: 452 GSKLRLCGCISKIRGVEKAAPERQRCYR 479


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 443  HMPNDKSSAIYSNASGHGSVPSLYFHT 363
            H P    S+ +S++S  G  PS+  HT
Sbjct: 1334 HQPQLSQSSHHSSSSHGGPTPSIISHT 1360


>AY705396-1|AAU12505.1|  710|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 3 protein.
          Length = 710

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 13/46 (28%), Positives = 24/46 (52%)
 Frame = +3

Query: 633 TSAVTHQLPANVHQIRVTAIDIHPDNSLMGFNLYRWKSHIDYNQPW 770
           T A+T ++   + Q+    ID++  N +M  NL+  ++  DY   W
Sbjct: 46  TDALTVKIKLKLSQL----IDVNLKNQIMTTNLWVEQTWYDYKLKW 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 907,484
Number of Sequences: 2352
Number of extensions: 19527
Number of successful extensions: 42
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)