Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30778
(823 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 43 3e-04
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 43 3e-04
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 42 4e-04
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 41 9e-04
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 40 0.002
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 40 0.002
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 40 0.002
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 40 0.002
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 40 0.002
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 40 0.003
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 40 0.003
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 40 0.003
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 39 0.003
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 39 0.003
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 39 0.003
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 38 0.006
At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-rel... 38 0.006
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 37 0.014
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 37 0.014
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 37 0.014
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 37 0.019
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 37 0.019
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 36 0.025
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 36 0.025
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 36 0.025
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 36 0.025
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 36 0.025
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 36 0.025
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 36 0.025
At1g52730.2 68414.m05959 transducin family protein / WD-40 repea... 36 0.025
At1g52730.1 68414.m05958 transducin family protein / WD-40 repea... 36 0.025
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 36 0.025
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 36 0.032
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 36 0.032
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 36 0.032
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 36 0.032
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 36 0.032
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 36 0.043
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 36 0.043
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 35 0.075
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 35 0.075
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 35 0.075
At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-rel... 34 0.099
At3g52190.1 68416.m05731 transducin family protein / WD-40 repea... 34 0.099
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 34 0.13
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 34 0.13
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 34 0.13
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 34 0.13
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 33 0.23
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 33 0.23
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 33 0.23
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.30
At2g47410.1 68415.m05917 transducin family protein / WD-40 repea... 33 0.30
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 32 0.40
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 32 0.40
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 32 0.40
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 32 0.40
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 32 0.40
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 32 0.40
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 32 0.40
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 32 0.53
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 32 0.53
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 32 0.53
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 32 0.53
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 32 0.53
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 32 0.53
At5g49430.1 68418.m06116 transducin family protein / WD-40 repea... 31 0.70
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 31 0.70
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 31 0.70
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 31 0.70
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 31 0.70
At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5 ... 31 0.92
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 31 0.92
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 31 0.92
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 31 0.92
At3g21060.1 68416.m02662 transducin family protein / WD-40 repea... 31 1.2
At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-rel... 31 1.2
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 30 1.6
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 30 1.6
At2g47990.1 68415.m06006 transducin family protein / WD-40 repea... 30 1.6
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 30 1.6
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 30 1.6
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 30 1.6
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 30 2.1
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 30 2.1
At2g18900.1 68415.m02205 transducin family protein / WD-40 repea... 30 2.1
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 30 2.1
At5g52250.1 68418.m06485 transducin family protein / WD-40 repea... 29 2.8
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 29 2.8
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 29 2.8
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 29 2.8
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 29 2.8
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 29 2.8
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 29 3.7
At5g01770.1 68418.m00096 transducin family protein / WD-40 repea... 29 3.7
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 29 3.7
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 29 3.7
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 29 3.7
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 29 3.7
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 29 3.7
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 29 3.7
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 29 3.7
At1g65580.1 68414.m07439 endonuclease/exonuclease/phosphatase fa... 29 3.7
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 29 3.7
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 29 3.7
At5g45760.2 68418.m05626 transducin family protein / WD-40 repea... 29 4.9
At5g45760.1 68418.m05625 transducin family protein / WD-40 repea... 29 4.9
At2g46560.1 68415.m05808 transducin family protein / WD-40 repea... 29 4.9
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 29 4.9
At2g34260.2 68415.m04192 transducin family protein / WD-40 repea... 29 4.9
At2g34260.1 68415.m04191 transducin family protein / WD-40 repea... 29 4.9
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 29 4.9
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 29 4.9
At5g23730.1 68418.m02782 transducin family protein / WD-40 repea... 28 6.5
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 28 6.5
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 28 6.5
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 28 6.5
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 28 6.5
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 28 6.5
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 28 6.5
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 28 6.5
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 28 8.6
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 28 8.6
At3g13300.2 68416.m01675 transducin family protein / WD-40 repea... 28 8.6
At3g13300.1 68416.m01674 transducin family protein / WD-40 repea... 28 8.6
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/63 (28%), Positives = 33/63 (52%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V + DG + +G ED VK+WD+ + H+ + H+ ++ ++D HP
Sbjct: 233 KGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKLLHEFKS--HEGKIQSLDFHPHE 290
Query: 711 SLM 719
L+
Sbjct: 291 FLL 293
Score = 35.5 bits (78), Expect = 0.043
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
L GH+ ++ +AAG GT+K+WD++ + V L H+ +++ HP
Sbjct: 148 LYGHSSGIDSVTFDASEGLVAAGAASGTIKLWDLEEAKVVRTLTG--HRSNCVSVNFHP 204
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
F H G + D HP+ L TG D W +E +L
Sbjct: 274 FKSHEGKIQSLDFHPHEFLLATGSADKTVKFWDLETFEL 312
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 FSKHVGSVFCCDL-HPNGKLAVTGGEDDKAYVWSV 250
F H +V C + + ++ VTGGED K +W++
Sbjct: 105 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI 139
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/54 (25%), Positives = 20/54 (37%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRV 683
+ L GH G A+G D +KIWDI+ H + + V
Sbjct: 188 RTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNV 241
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
+ H V P+G+ V+GGED+ VW + KL
Sbjct: 232 YKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDLTAGKL 270
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/76 (34%), Positives = 34/76 (44%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVT 686
T K L GH C + +G D TV+IWD+ T LPA H VT
Sbjct: 102 TGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKVLPA--HSDPVT 159
Query: 687 AIDIHPDNSLMGFNLY 734
A+D + D SL+ + Y
Sbjct: 160 AVDFNRDGSLIVSSSY 175
Score = 31.5 bits (68), Expect = 0.70
Identities = 22/86 (25%), Positives = 38/86 (44%), Gaps = 1/86 (1%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMWHFGAKV 462
H D V V F+ DGS + + G+ ++W G L + +SF + K
Sbjct: 154 HSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTL-IDDENPPVSFVRFSPNGKF 212
Query: 463 LICGAVSGDIYIFKILPAK-LKCFRG 537
++ G + + ++ I AK LK + G
Sbjct: 213 ILVGTLDNTLRLWNISSAKFLKTYTG 238
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/50 (28%), Positives = 26/50 (52%)
Frame = +3
Query: 570 TDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLM 719
T+G R+ +G ED V +W++ + + +L H V + HP +L+
Sbjct: 253 TNGKRIVSGSEDNCVHMWELNSKKLLQKLEG--HTETVMNVACHPTENLI 300
Score = 28.7 bits (61), Expect = 4.9
Identities = 9/31 (29%), Positives = 15/31 (48%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H FC + +P + V+G D+ +W V
Sbjct: 112 HTNYAFCVNFNPQSNMIVSGSFDETVRIWDV 142
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 42.3 bits (95), Expect = 4e-04
Identities = 27/109 (24%), Positives = 49/109 (44%), Gaps = 1/109 (0%)
Frame = +1
Query: 250 GIGQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDL 429
G G E HKDSV + FS+DG LA+ + GV++++ S GT + +
Sbjct: 101 GNGDWAAELPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGT--LKCVLDGPGAGI 158
Query: 430 SFGMWHFGAKVLICGAVSGDIYIFKI-LPAKLKCFRGIMSKLNVQSYSP 573
+ WH +++ G+ ++++ A L F G + ++P
Sbjct: 159 EWVRWHPRGHIVLAGSEDCSLWMWNADKEAYLNMFSGHNLNVTCGDFTP 207
Score = 40.7 bits (91), Expect = 0.001
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPAN-VHQIRVTAIDIH 701
+ GHN+ V C DG + G +D ++ +W+ KT H + + H +T +DI+
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDIN 251
Query: 702 PDNSL 716
++SL
Sbjct: 252 SNSSL 256
Score = 34.3 bits (75), Expect = 0.099
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 247
+FS H +V C D P+GKL TG +D VW+
Sbjct: 192 MFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWN 225
Score = 32.7 bits (71), Expect = 0.30
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 137 SALVFSKHVGSVFCCDLHP-NGKLAVTGGEDDKAYVWSV 250
S F+ H G ++ P + L TGG DDKA++W +
Sbjct: 62 SVHTFTGHKGELYALACSPTDATLVATGGGDDKAFLWKI 100
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAV 644
L GH V C DG +A+G DG V+I+D + +
Sbjct: 109 LPGHKDSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTL 147
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Frame = +2
Query: 152 SKHVGSVFCCDLHPNGK---LAVTGGEDDKAYVWSVE 253
+ H SV C P+ LA TGG D K +W ++
Sbjct: 281 NSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ 317
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 41.1 bits (92), Expect = 9e-04
Identities = 22/58 (37%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
Frame = +3
Query: 513 GET---KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
GET K GH +V C K G +A+ +D T KIW+IK S H L + +I
Sbjct: 436 GETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEI 493
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 140 ALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
A F+ H G V C P G L + +D A +W+++
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +2
Query: 152 SKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
SKH G +F + G +TG D A VW V+
Sbjct: 362 SKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK 395
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/44 (25%), Positives = 24/44 (54%)
Frame = +1
Query: 253 IGQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDG 384
+G+++ H++ V + FS +G Y+A+ + I +W +G
Sbjct: 530 LGKMLCSFNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEG 573
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV---ELVKLY 268
F+ H V+ PNG+ +G D ++WS+ ++VK Y
Sbjct: 537 FNGHREPVYSLAFSPNGEYIASGSLDKSIHIWSIKEGKIVKTY 579
Score = 28.3 bits (60), Expect = 6.5
Identities = 22/107 (20%), Positives = 39/107 (36%), Gaps = 1/107 (0%)
Frame = +1
Query: 256 GQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSF 435
G+++ HK + + ++ G YL T + VW + W FE+ +
Sbjct: 355 GELISTLSKHKGPIFSLKWNKKGDYLLTGSVDRTAVVWDVK--AEEWKQQFEFHSGPTLD 412
Query: 436 GMWHFGAKVLICGAVSGDIYIFKILPAK-LKCFRGIMSKLNVQSYSP 573
W + IY+ KI + K F G ++N + P
Sbjct: 413 VDWRNNVS-FATSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDP 458
Score = 27.9 bits (59), Expect = 8.6
Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Frame = +3
Query: 510 SGETKVLQGHNVKVECAKLFTDGVRM-AAGYEDGTVKIWDI 629
+ + ++L+GH +V CA ++ + A+G D T +IW I
Sbjct: 255 NSDVRILEGHTSEV-CACAWSPSASLLASGSGDATARIWSI 294
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 40.3 bits (90), Expect = 0.002
Identities = 16/36 (44%), Positives = 25/36 (69%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
L+GH+ +V C K+ + G R+ DGTVK+WD++T
Sbjct: 935 LKGHDSQVSCVKMLS-GERVLTAAHDGTVKMWDVRT 969
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 510 SGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQL 656
S + GH V K F DG R G +DGT +++DI+T HQL
Sbjct: 238 SRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG---HQL 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQL 656
+ LQGH KV + R+ + +DG + +W+ TS TH +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAI 103
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 510 SGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQL 656
S + GH V K F DG R G +DGT +++DI+T HQL
Sbjct: 176 SRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG---HQL 221
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 39.9 bits (89), Expect = 0.002
Identities = 19/49 (38%), Positives = 25/49 (51%)
Frame = +3
Query: 510 SGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQL 656
S + GH V K F DG R G +DGT +++DI+T HQL
Sbjct: 238 SRAVRTFHGHEGDVNTVKFFPDGYRFGTGSDDGTCRLYDIRTG---HQL 283
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/45 (31%), Positives = 23/45 (51%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQL 656
+ LQGH KV + R+ + +DG + +W+ TS TH +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAI 103
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 39.9 bits (89), Expect = 0.002
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
+ G++ CC +GK +TGGEDD VWS+E
Sbjct: 344 YYGALLCCSWSMDGKYILTGGEDDLVQVWSME 375
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
L GH+ ++ V +AAG GT+K+WD++ + + L H+ ++D HP
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG--HRSNCISVDFHP 111
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V + DG + +G ED VK+WD+ + + + H+ ++ ++D HP
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS--HEGQIQSLDFHPHE 197
Query: 711 SLM 719
L+
Sbjct: 198 FLL 200
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
F H G + D HP+ L TG D W +E +L
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 FSKHVGSVFCCDL-HPNGKLAVTGGEDDKAYVWSV 250
F H +V C + + ++ VTGGED K +W++
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI 46
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
+ H V P+G+ V+GGED+ VW + KL
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 39.5 bits (88), Expect = 0.003
Identities = 17/59 (28%), Positives = 30/59 (50%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
L GH+ ++ V +AAG GT+K+WD++ + + L H+ ++D HP
Sbjct: 55 LYGHSSGIDSVTFDASEVLVAAGAASGTIKLWDLEEAKIVRTLTG--HRSNCISVDFHP 111
Score = 37.9 bits (84), Expect = 0.008
Identities = 17/63 (26%), Positives = 32/63 (50%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V + DG + +G ED VK+WD+ + + + H+ ++ ++D HP
Sbjct: 140 KGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKLLTEFKS--HEGQIQSLDFHPHE 197
Query: 711 SLM 719
L+
Sbjct: 198 FLL 200
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/39 (33%), Positives = 17/39 (43%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
F H G + D HP+ L TG D W +E +L
Sbjct: 181 FKSHEGQIQSLDFHPHEFLLATGSADRTVKFWDLETFEL 219
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +2
Query: 149 FSKHVGSVFCCDL-HPNGKLAVTGGEDDKAYVWSV 250
F H +V C + + ++ VTGGED K +W++
Sbjct: 12 FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAI 46
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
+ H V P+G+ V+GGED+ VW + KL
Sbjct: 139 YKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDLTAGKL 177
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 39.5 bits (88), Expect = 0.003
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = +2
Query: 137 SALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVK-LYM 271
S LVF H+ VF + PNG +GGED++ +W + + K LY+
Sbjct: 415 SILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYI 460
Score = 34.3 bits (75), Expect = 0.099
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
V QGH V +G +A+G ED +IWD++ + +PA+ + +
Sbjct: 418 VFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLV 468
Score = 32.3 bits (70), Expect = 0.40
Identities = 17/42 (40%), Positives = 22/42 (52%), Gaps = 2/42 (4%)
Frame = +1
Query: 271 ECVNHKDSVIFVGFSF--DGSYLATVDMSGVIKVWKYSDGTD 390
+C N D G SF DG LAT +SGV K+W+ T+
Sbjct: 248 DCSNFGDDRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTN 289
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
NT E + +GH+ V DG A+ D ++WD++T
Sbjct: 369 NTGAELLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 39.1 bits (87), Expect = 0.003
Identities = 19/66 (28%), Positives = 34/66 (51%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIH 701
KVL+GH V C + +G D T++IW++KT + A H + ++++ +
Sbjct: 122 KVLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGKCVRMIKA--HSMPISSVHFN 179
Query: 702 PDNSLM 719
D SL+
Sbjct: 180 RDGSLI 185
Score = 35.5 bits (78), Expect = 0.043
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 3/64 (4%)
Frame = +3
Query: 522 KVLQGHNVKVEC---AKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
KV GH KV C A T+G + +G ED V +WD++ + +L H V ++
Sbjct: 249 KVYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQARNILQRLEG--HTDAVISV 306
Query: 693 DIHP 704
HP
Sbjct: 307 SCHP 310
Score = 34.3 bits (75), Expect = 0.099
Identities = 13/44 (29%), Positives = 22/44 (50%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQ 653
K L+GH + C K DG +A+ D T+ +W ++ H+
Sbjct: 37 KTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHR 80
Score = 31.5 bits (68), Expect = 0.70
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 3/39 (7%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLH---PNGKLAVTGGEDDKAYVWSVE 253
V++ H VFC NGK V+G ED+ Y+W ++
Sbjct: 250 VYTGHTNKVFCITSAFSVTNGKYIVSGSEDNCVYLWDLQ 288
Score = 31.1 bits (67), Expect = 0.92
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVK 262
V H VFC + +P L V+G D+ +W V+ K
Sbjct: 123 VLRGHTNFVFCVNFNPPSNLIVSGSFDETIRIWEVKTGK 161
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/37 (27%), Positives = 20/37 (54%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIK 632
++++ H++ + DG + + DG+ KIWD K
Sbjct: 164 RMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/44 (29%), Positives = 20/44 (45%)
Frame = +1
Query: 256 GQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGT 387
G+ V H + V F+ DGS + + G K+W +GT
Sbjct: 160 GKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGT 203
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
+ G++ CC +GK +TGGEDD VWS+E
Sbjct: 344 YYGALLCCAWSMDGKYLLTGGEDDLVQVWSME 375
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/25 (44%), Positives = 18/25 (72%)
Frame = +1
Query: 304 VGFSFDGSYLATVDMSGVIKVWKYS 378
+ FS DG+YLATV G ++++ +S
Sbjct: 309 IAFSNDGAYLATVGRDGYLRIFDFS 333
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.1 bits (87), Expect = 0.003
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +2
Query: 143 LVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
L+F H+ V D PNG +GGED++ +W + + KL
Sbjct: 166 LIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKL 206
Score = 37.5 bits (83), Expect = 0.011
Identities = 16/57 (28%), Positives = 31/57 (54%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T+ + QGH +V +G +A+G ED +IWD++ + + +PA+V+ +
Sbjct: 161 TARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLV 217
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 38.3 bits (85), Expect = 0.006
Identities = 21/61 (34%), Positives = 30/61 (49%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
V +GH V D + +G +D T+KIW+I+T + LP H V A+D P
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKLKQDLPG--HADEVFAVDWSP 454
Query: 705 D 707
D
Sbjct: 455 D 455
Score = 35.9 bits (79), Expect = 0.032
Identities = 17/55 (30%), Positives = 28/55 (50%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
L GH + V C K DG+ + G +D T+K+W+ + +L + H I A+
Sbjct: 237 LSGHTLAVTCVKWGGDGI-IYTGSQDCTIKMWETTQGKLIRELKGHGHWINSLAL 290
Score = 35.5 bits (78), Expect = 0.043
Identities = 14/39 (35%), Positives = 23/39 (58%)
Frame = +3
Query: 519 TKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
++ + GH V C DG ++A+G D TV++WD+ T
Sbjct: 102 SQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYT 140
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/37 (37%), Positives = 19/37 (51%)
Frame = +1
Query: 274 CVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDG 384
C HK+ V+ V +S DG +L + SG I W G
Sbjct: 147 CKGHKNWVLTVAWSPDGKHLVSGSKSGEICCWNPKKG 183
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
VF HVG V+ + +L ++G +D +W + KL
Sbjct: 397 VFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKKL 436
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/81 (23%), Positives = 37/81 (45%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMWHFGAKV 462
H+ V V FS DG ++A+ +++W + T + F + W +++
Sbjct: 359 HQQLVNHVYFSPDGKWIASASFDKSVRLW--NGITGQFVTVFRGHVGPVYQVSWSADSRL 416
Query: 463 LICGAVSGDIYIFKILPAKLK 525
L+ G+ + I++I KLK
Sbjct: 417 LLSGSKDSTLKIWEIRTKKLK 437
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVW 244
H VF D P+G+ V+GG+D +W
Sbjct: 443 HADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
>At1g03060.1 68414.m00280 WD-40 repeat family protein / beige-related
similar to BEIGE (GI:3928547) [Rattus norvegicus];
Similar to gb|U70015 lysosomal trafficking regulator from
Mus musculus and contains 2 Pfam PF00400 WD-40, G-beta
repeats. ESTs gb|T43386 and gb|AA395236 come from this
gene
Length = 3601
Score = 38.3 bits (85), Expect = 0.006
Identities = 17/46 (36%), Positives = 26/46 (56%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLP 659
K L H KV C ++ + +A+G +D TV IWD+ + + QLP
Sbjct: 3374 KALCAHTAKVTCLRVSQPYMMIASGSDDCTVIIWDLSSLSFVRQLP 3419
Score = 28.7 bits (61), Expect = 4.9
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Frame = +3
Query: 471 WGCFGRYLHF*NTSGETKVLQGH-----NVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
WG R L F + + K+L H + +++CA + DG + G EDG V +W +
Sbjct: 3303 WGFPDRSLRF-MSYDQDKLLSTHENLHESNQIQCAGVSHDGRIVVTGAEDGLVCVWRV 3359
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 37.1 bits (82), Expect = 0.014
Identities = 27/87 (31%), Positives = 41/87 (47%), Gaps = 5/87 (5%)
Frame = +3
Query: 474 GCFGRYLHF*N-TSGET-KVLQGH---NVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
GC L + T+GE +V +GH + K +C +D + G EDG V WD+ +
Sbjct: 202 GCLDSTLRLLDRTTGELLQVYKGHISKSFKTDCCLTNSDA-HVIGGSEDGLVFFWDLVDA 260
Query: 639 AVTHQLPANVHQIRVTAIDIHPDNSLM 719
V + A H + VT++ HP M
Sbjct: 261 KVLSKFRA--HDLVVTSVSYHPKEDCM 285
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 516 ETKVL--QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTA 689
ET +L QGH V C D +A G +D VK+W++ + T + H VTA
Sbjct: 339 ETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG--TCFITFTEHTNAVTA 396
Query: 690 IDIHPDN-SLMGFNL 731
+ DN SL+ +L
Sbjct: 397 LHFMADNHSLLSASL 411
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H V C P+ +L TG +D+K VW+V
Sbjct: 348 HYFDVNCVTYSPDSQLLATGADDNKVKVWNV 378
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 37.1 bits (82), Expect = 0.014
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = +3
Query: 516 ETKVL--QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTA 689
ET +L QGH V C D +A G +D VK+W++ + T + H VTA
Sbjct: 379 ETYILKQQGHYFDVNCVTYSPDSQLLATGADDNKVKVWNVMSG--TCFITFTEHTNAVTA 436
Query: 690 IDIHPDN-SLMGFNL 731
+ DN SL+ +L
Sbjct: 437 LHFMADNHSLLSASL 451
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H V C P+ +L TG +D+K VW+V
Sbjct: 388 HYFDVNCVTYSPDSQLLATGADDNKVKVWNV 418
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/44 (38%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Frame = +3
Query: 510 SGE-TKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
+GE ++ GH V + DG MA+G EDGT+ +WD+ T+
Sbjct: 530 TGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTA 573
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/63 (31%), Positives = 31/63 (49%), Gaps = 1/63 (1%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSA-VTHQLPANVHQIRVTAIDIHP 704
L GHN V +G +A+G D TVK+WD+ +S +T N + R+ ++ P
Sbjct: 579 LMGHNSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTKLTKAEEKNGNSNRLRSLRTFP 638
Query: 705 DNS 713
S
Sbjct: 639 TKS 641
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 36.7 bits (81), Expect = 0.019
Identities = 16/64 (25%), Positives = 31/64 (48%)
Frame = +3
Query: 513 GETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
G + +GH+ + + DG + +G D VK+WD+ + H+ H+ + ++
Sbjct: 133 GCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KFHEGPIRSL 190
Query: 693 DIHP 704
D HP
Sbjct: 191 DFHP 194
Score = 33.5 bits (73), Expect = 0.17
Identities = 15/59 (25%), Positives = 28/59 (47%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
L GH V+ + V + AG G +K+WD++ + + H+ +A++ HP
Sbjct: 54 LCGHTSAVDSVAFDSAEVLVLAGASSGVIKLWDVEEAKMVRAFTG--HRSNCSAVEFHP 110
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/62 (24%), Positives = 23/62 (37%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIH 701
+ GH + G +A+G D +KIWDI+ H ++ I
Sbjct: 94 RAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTYKG--HSRGISTIRFT 151
Query: 702 PD 707
PD
Sbjct: 152 PD 153
Score = 27.9 bits (59), Expect = 8.6
Identities = 14/41 (34%), Positives = 20/41 (48%)
Frame = +3
Query: 585 MAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPD 707
+A G D TVK WD++T + +R +I HPD
Sbjct: 199 LATGSADRTVKFWDLETFELIGSTRPEATGVR--SIKFHPD 237
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 36.3 bits (80), Expect = 0.025
Identities = 20/53 (37%), Positives = 27/53 (50%)
Frame = +3
Query: 465 DMWGCFGRYLHF*NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIW 623
DMW R F +T E +GH+ V C + G A+G EDGT++IW
Sbjct: 249 DMWV---RLFDF-HTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTA 689
+GH V + L + +R A+ D + K+WD T V H + H +R A
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSF-EHKHIVRACA 109
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 785
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
K V CC +GKL + G D K ++W++E +++
Sbjct: 506 KSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 542
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
K V CC +GKL + G D K ++W++E +++
Sbjct: 508 KSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
K V CC +GKL + G D K ++W++E +++
Sbjct: 508 KSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
K V CC +GKL + G D K ++W++E +++
Sbjct: 508 KSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7
WD-40 repeats ; similar to LEUNIG
(GP:11141605)[Arabidopsis thaliana]
Length = 787
Score = 36.3 bits (80), Expect = 0.025
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVKL 265
K V CC +GKL + G D K ++W++E +++
Sbjct: 508 KSASKVICCSFSYDGKLLASAGHDKKVFIWNMETLQV 544
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 36.3 bits (80), Expect = 0.025
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 537 HNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNS 713
H+ V C D +A+G +DG +KIW I+T + A H VT++ D S
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDA--HSQGVTSLSFSRDGS 318
Score = 33.9 bits (74), Expect = 0.13
Identities = 16/39 (41%), Positives = 21/39 (53%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
K +GH V A +DG R+ D TVK+WD KT+
Sbjct: 341 KEFRGHTSYVNHAIFTSDGSRIITASSDCTVKVWDSKTT 379
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/34 (38%), Positives = 18/34 (52%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDG 384
H D V+ + FS D LA+ G IK+W+ G
Sbjct: 262 HDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTG 295
Score = 29.9 bits (64), Expect = 2.1
Identities = 12/25 (48%), Positives = 16/25 (64%)
Frame = +1
Query: 310 FSFDGSYLATVDMSGVIKVWKYSDG 384
FS DG +LA+ + G I+VW Y G
Sbjct: 221 FSPDGQFLASSSVDGFIEVWDYISG 245
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +3
Query: 534 GHNVKVECAKLFTDGVRMAAGYEDGTVKIWD 626
G ECA+ DG +A+ DG +++WD
Sbjct: 211 GKKSHAECARFSPDGQFLASSSVDGFIEVWD 241
>At1g52730.2 68414.m05959 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIW 623
T E +GH+ V C + G+ A+G EDGT++IW
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V + L + +R A+ D + K+WD T V H + H +R A +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSF-EHKHIVRACAFSEDTKS 116
Query: 711 SLMG 722
L G
Sbjct: 117 LLTG 120
>At1g52730.1 68414.m05958 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to UNR-interacting protein (WD-40 repeat protein
PT-WD) (SP:Q9Y3F4) [Homo sapiens]
Length = 343
Score = 36.3 bits (80), Expect = 0.025
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIW 623
T E +GH+ V C + G+ A+G EDGT++IW
Sbjct: 259 TGEEIGCNKGHHGPVHCVRFTPTGLSYASGSEDGTIRIW 297
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V + L + +R A+ D + K+WD T V H + H +R A +
Sbjct: 58 EGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSF-EHKHIVRACAFSEDTKS 116
Query: 711 SLMG 722
L G
Sbjct: 117 LLTG 120
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
+ GH K+ K DG +A G EDG VKIW I S
Sbjct: 194 INGHKGKIWTLKFSPDGKYLATGGEDGVVKIWRITLS 230
Score = 35.1 bits (77), Expect = 0.057
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +1
Query: 262 VVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWK 372
+V + HK + + FS DG YLAT GV+K+W+
Sbjct: 190 MVQKINGHKGKIWTLKFSPDGKYLATGGEDGVVKIWR 226
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/33 (36%), Positives = 17/33 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVEL 256
H G ++ P+GK TGGED +W + L
Sbjct: 197 HKGKIWTLKFSPDGKYLATGGEDGVVKIWRITL 229
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 35.9 bits (79), Expect = 0.032
Identities = 25/74 (33%), Positives = 31/74 (41%), Gaps = 2/74 (2%)
Frame = +1
Query: 259 QVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWK-YSDGTDPWPLAFEYIADDLSF 435
+ V V HK+ V FV FS G YLAT +WK D E + +SF
Sbjct: 215 ETVQILVAHKNEVWFVQFSNSGKYLATASSDCTAIIWKVLDDNKVELKHTLESHQNPVSF 274
Query: 436 GMWH-FGAKVLICG 474
W K+L CG
Sbjct: 275 VSWSPDDTKLLTCG 288
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRM-AAGYEDGTVKIW 623
+VL GH++ V C RM A+ +D T++IW
Sbjct: 479 EVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIW 513
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+GHN V C + D R+ G D T K+WD+K+
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H G+V+CCD+ + +TG D A +W V+
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+GHN V C + D R+ G D T K+WD+K+
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H G+V+CCD+ + +TG D A +W V+
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 35.9 bits (79), Expect = 0.032
Identities = 14/35 (40%), Positives = 20/35 (57%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+GHN V C + D R+ G D T K+WD+K+
Sbjct: 49 RGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H G+V+CCD+ + +TG D A +W V+
Sbjct: 51 HNGAVWCCDVSRDSSRLITGSADQTAKLWDVK 82
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/59 (27%), Positives = 29/59 (49%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
L GH V+ ++ V + AG G +K+WD++ S + H+ +A++ HP
Sbjct: 3 LCGHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTG--HRSNCSAVEFHP 59
Score = 35.9 bits (79), Expect = 0.032
Identities = 16/64 (25%), Positives = 30/64 (46%)
Frame = +3
Query: 513 GETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
G + +GH + + DG + +G D VK+WD+ + H+ H+ + ++
Sbjct: 82 GCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEF--KCHEGPIRSL 139
Query: 693 DIHP 704
D HP
Sbjct: 140 DFHP 143
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 6/59 (10%)
Frame = +3
Query: 585 MAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLM------GFNLYRWK 743
+A G D TVK WD++T + +R AI HPD + G +Y W+
Sbjct: 148 LATGSADRTVKFWDLETFELIGTTRPEATGVR--AIAFHPDGQTLFCGLDDGLKVYSWE 204
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 35.5 bits (78), Expect = 0.043
Identities = 17/57 (29%), Positives = 26/57 (45%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
+V+QGH V G D T+KIWD+ T + L ++ Q+R A+
Sbjct: 170 RVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIEQVRGLAV 226
Score = 33.9 bits (74), Expect = 0.13
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H+ V+C LHP + +TGG D VW +
Sbjct: 259 HLSGVYCLALHPTLDVLLTGGRDSVCRVWDI 289
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 35.5 bits (78), Expect = 0.043
Identities = 18/57 (31%), Positives = 26/57 (45%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
+VLQGH V G D T+KIWD+ T + L ++ Q+R A+
Sbjct: 164 RVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLAV 220
Score = 33.5 bits (73), Expect = 0.17
Identities = 12/31 (38%), Positives = 17/31 (54%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H+ V+C LHP + +TGG D VW +
Sbjct: 253 HLHGVYCLALHPTLDVVLTGGRDSVCRVWDI 283
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 34.7 bits (76), Expect = 0.075
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
K +GH V A TDG + + DG +K+W++ TS
Sbjct: 577 KTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNTS 615
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H G V H +G L T G D K VW V+
Sbjct: 101 HEGPVMGMACHASGGLLATAGADRKVLVWDVD 132
Score = 27.9 bits (59), Expect = 8.6
Identities = 17/61 (27%), Positives = 26/61 (42%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V G +A D V +WD+ TH H+ V++I HPD+
Sbjct: 99 KGHEGPVMGMACHASGGLLATAGADRKVLVWDVDGGFCTHYFRG--HKGVVSSILFHPDS 156
Query: 711 S 713
+
Sbjct: 157 N 157
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 34.7 bits (76), Expect = 0.075
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H G+V+CCD+ + +TG D A +W V+
Sbjct: 78 HSGAVWCCDISRDSSRLITGSADQTAKLWDVK 109
Score = 34.3 bits (75), Expect = 0.099
Identities = 13/35 (37%), Positives = 20/35 (57%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+GH+ V C + D R+ G D T K+WD+K+
Sbjct: 76 RGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKS 110
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 34.7 bits (76), Expect = 0.075
Identities = 18/54 (33%), Positives = 27/54 (50%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANV 668
T E +GH+ V C + G +G EDGTV+IW + +V H +N+
Sbjct: 254 TGEEIGCNKGHHGPVHCVRYAPGGESYTSGSEDGTVRIWVV--GSVNHPEESNL 305
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/79 (26%), Positives = 31/79 (39%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+GH V L + +R A+ D T KIW+ T H + H +R A
Sbjct: 53 EGHKGAVWSCSLDKNAIRAASASADFTAKIWNALTGDELHSF-EHKHIVRACAFSEDTHR 111
Query: 711 SLMGFNLYRWKSHIDYNQP 767
L G + + D N+P
Sbjct: 112 LLTG-GMEKILRIFDLNRP 129
>At4g02660.1 68417.m00361 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to BEIGE (GI:3928547) [Rattus norvegicus]; lysosomal
trafficking regulator - Bos taurus, EMBL: AF114785
Length = 3471
Score = 34.3 bits (75), Expect = 0.099
Identities = 16/46 (34%), Positives = 25/46 (54%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLP 659
K L H KV C ++ + +A+ +D TV IWD+ + + QLP
Sbjct: 3318 KSLCAHTAKVICLRVSQPYMMIASSSDDCTVIIWDLSSLSFVRQLP 3363
Score = 29.9 bits (64), Expect = 2.1
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Frame = +3
Query: 471 WGCFGRYLHF*NTSGETKVLQGH-NV----KVECAKLFTDGVRMAAGYEDGTVKIWDI 629
WG R L F + + K+L H N+ +++CA + DG + G EDG V +W +
Sbjct: 3247 WGFPDRTLRF-MSYDQDKLLSTHENLHEGNQIQCAGVSHDGRIVVTGAEDGLVSVWRV 3303
>At3g52190.1 68416.m05731 transducin family protein / WD-40 repeat
family protein similar to St12p protein (GI:166878)
{Arabidopsis thaliana}; contains Pfam profile: PF00400
WD domain, G-beta repeat
Length = 398
Score = 34.3 bits (75), Expect = 0.099
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Frame = +1
Query: 262 VVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGM 441
++ E HK S+ + FS D +LAT G ++WK DG +PL+ + D + +
Sbjct: 157 ILDEPKAHK-SIRDMDFSLDSEFLATTSTDGSARIWKAEDG---FPLSTLERSGDENIEL 212
Query: 442 WHF---GAK-VLICGAVSGD 489
F G K L C A GD
Sbjct: 213 CRFSKDGTKPFLFCAAQRGD 232
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWK 372
HK S+ + FS DG YLA+ VI++WK
Sbjct: 362 HKGSIWSIKFSLDGRYLASAGEDCVIQIWK 391
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/33 (33%), Positives = 16/33 (48%)
Frame = +2
Query: 155 KHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
++ S L NGK V+ ED YVW+ +
Sbjct: 642 RNTNSQISASLTSNGKFLVSASEDSNVYVWNYD 674
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice
sites at introns 4 and 6
Length = 1017
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/36 (41%), Positives = 20/36 (55%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIK 632
+L GHN V AK F D + D T+K+WD+K
Sbjct: 877 ILSGHNKAVSYAK-FLDNETLVTASTDNTLKLWDLK 911
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
FS H GS+ P+GK + GED VWS+
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYS--DGTDPWPLAFEYIADDLSFGM 441
H S++ + FS DG Y+A+ V++VW + + TD + +A + + FGM
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVA--EVDSGVYFGM 269
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 33.9 bits (74), Expect = 0.13
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
FS H GS+ P+GK + GED VWS+
Sbjct: 214 FSAHDGSILAMKFSPDGKYIASAGEDCVVRVWSI 247
Score = 30.7 bits (66), Expect = 1.2
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYS--DGTDPWPLAFEYIADDLSFGM 441
H S++ + FS DG Y+A+ V++VW + + TD + +A + + FGM
Sbjct: 217 HDGSILAMKFSPDGKYIASAGEDCVVRVWSITEEERTDTYEVA--EVDSGVYFGM 269
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 33.1 bits (72), Expect = 0.23
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPD 707
L GH+ VE L +DG +G DG +++WD+ T T + H V ++ D
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVG--HTKDVLSVAFSTD 116
Query: 708 N 710
N
Sbjct: 117 N 117
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPA 662
L GH+ + + DG A+G +DG + +WD+ + L A
Sbjct: 189 LVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +3
Query: 504 NTSGETKVL----QGHNVKVECAKLFTDGV--RMAAGYEDGTVKIWDIKTSAVTHQLPAN 665
NT GE K GH V C + + + + + D TVK+W+++ + + L
Sbjct: 133 NTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNSLVG- 191
Query: 666 VHQIRVTAIDIHPDNSL 716
H + + + PD SL
Sbjct: 192 -HSGYLNTVAVSPDGSL 207
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 33.1 bits (72), Expect = 0.23
Identities = 21/71 (29%), Positives = 30/71 (42%), Gaps = 4/71 (5%)
Frame = +3
Query: 522 KVLQGHNVKVECAKL----FTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTA 689
K+ +GH E L DG ++ AG D V IWD + ++LP H V
Sbjct: 262 KIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPG--HTGSVNE 319
Query: 690 IDIHPDNSLMG 722
HP ++G
Sbjct: 320 CVFHPTEPIIG 330
Score = 31.9 bits (69), Expect = 0.53
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +3
Query: 567 FTDGV-RMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLM 719
F+D ++ G D VK+WD++ T L HQ +T + + PD S +
Sbjct: 188 FSDAADKIFTGGVDNDVKVWDLRKGEATMTLEG--HQDTITGMSLSPDGSYL 237
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +1
Query: 256 GQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
G+ H+D++ + S DGSYL T M + VW
Sbjct: 212 GEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVW 249
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/37 (32%), Positives = 21/37 (56%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
VL+GH + +DG ++ + D TV+ WD++T
Sbjct: 91 VLKGHKNAILDLHWTSDGSQIVSASPDKTVRAWDVET 127
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 33.1 bits (72), Expect = 0.23
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPAN 665
L GH V + DG A+G +DG V +WD+ + L AN
Sbjct: 190 LAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEAN 235
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/57 (26%), Positives = 26/57 (45%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDI 698
L GH+ VE L +DG +G DG +++WD+ T + + + A +
Sbjct: 59 LTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSL 115
Score = 28.7 bits (61), Expect = 4.9
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +3
Query: 504 NTSGETKVL-----QGHNVKVECAKLFTDGVR--MAAGYEDGTVKIWDIKTSAVTHQLPA 662
NT GE K +GH V C + + ++ + + D TVK+W++ + L
Sbjct: 133 NTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG 192
Query: 663 NVHQIRVTAIDIHPDNSL 716
H V+ + + PD SL
Sbjct: 193 --HTGYVSTVAVSPDGSL 208
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV-ELVKLY 268
H G V + P+G L +GG+D +W + E KLY
Sbjct: 193 HTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLY 230
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/52 (36%), Positives = 29/52 (55%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFG 438
H D+V + FS DG LAT GVI+V+K D + +F+++ +L G
Sbjct: 85 HGDAVTGLCFSSDGKSLATACADGVIRVFKLDDASSK---SFKFLRINLPAG 133
>At2g47410.1 68415.m05917 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to WDR protein, form B (GI:14970593) [Mus
musculus]
Length = 1589
Score = 32.7 bits (71), Expect = 0.30
Identities = 19/66 (28%), Positives = 32/66 (48%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIH 701
K L+GH V CA G + G +D VKIW ++T+ H+ +T + +
Sbjct: 299 KKLRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETALCL--ASCRGHEGDITDLAVS 356
Query: 702 PDNSLM 719
+N+L+
Sbjct: 357 SNNALV 362
Score = 32.7 bits (71), Expect = 0.30
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +2
Query: 170 VFCCDLHPNGKLAVTGGEDDKAYVWS 247
+ CC + NG + VTG D A VWS
Sbjct: 452 ILCCAYNANGTIFVTGSSDSNARVWS 477
Score = 29.9 bits (64), Expect = 2.1
Identities = 10/32 (31%), Positives = 18/32 (56%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H +V+C +G+ +TG +D +WS+E
Sbjct: 304 HRNAVYCAIFDRSGRYVITGSDDRLVKIWSME 335
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 516 ETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
E+K L H V CA+ DG+ A G D ++K++++
Sbjct: 23 ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 60
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 134 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVK 262
H + S+H V C P+G TGG D ++ V VK
Sbjct: 22 HESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVK 64
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/38 (34%), Positives = 22/38 (57%)
Frame = +3
Query: 516 ETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
E+K L H V CA+ DG+ A G D ++K++++
Sbjct: 115 ESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEV 152
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 134 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVK 262
H + S+H V C P+G TGG D ++ V VK
Sbjct: 114 HESKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVK 156
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/34 (38%), Positives = 21/34 (61%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIK 632
QGH KV ++G ++A+G D T +IW+I+
Sbjct: 17 QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIE 50
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 32.3 bits (70), Expect = 0.40
Identities = 13/45 (28%), Positives = 27/45 (60%)
Frame = +3
Query: 564 LFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDI 698
L DG+ + +G+ DG +++WDI+T + ++ H VT++ +
Sbjct: 365 LSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAG--HSSAVTSVSL 407
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
H+ +++ + FS DG YLA+ GV++VW
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H G++ P+G+ + GED VWSV
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
+Q H + K DG +A+ EDG +++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 32.3 bits (70), Expect = 0.40
Identities = 12/29 (41%), Positives = 20/29 (68%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
H+ +++ + FS DG YLA+ GV++VW
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVW 278
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H G++ P+G+ + GED VWSV
Sbjct: 250 HEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/34 (29%), Positives = 18/34 (52%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
+Q H + K DG +A+ EDG +++W +
Sbjct: 247 IQAHEGAILAMKFSPDGRYLASAGEDGVLRVWSV 280
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 32.3 bits (70), Expect = 0.40
Identities = 16/45 (35%), Positives = 27/45 (60%)
Frame = +3
Query: 585 MAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLM 719
+A GY DG+++IWD T T ++ N H+ VTA+ + S++
Sbjct: 79 VAVGYADGSIRIWD--TEKGTCEVNFNSHKGAVTALRYNKVGSML 121
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/34 (35%), Positives = 19/34 (55%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
L GH + V C + +DG + G +D +KIW +
Sbjct: 578 LYGHKLPVMCIDISSDGELIVTGSQDKNLKIWGL 611
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H V C D+ +G+L VTG +D +W ++
Sbjct: 581 HKLPVMCIDISSDGELIVTGSQDKNLKIWGLD 612
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 31.9 bits (69), Expect = 0.53
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWK 372
H +++ + FS DG +LA+ G+++VWK
Sbjct: 220 HDGAILAMKFSNDGKFLASSGEDGIVRVWK 249
Score = 28.3 bits (60), Expect = 6.5
Identities = 10/38 (26%), Positives = 22/38 (57%)
Frame = +3
Query: 516 ETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
+++ ++ H+ + K DG +A+ EDG V++W +
Sbjct: 213 QSQDIKAHDGAILAMKFSNDGKFLASSGEDGIVRVWKV 250
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 31.9 bits (69), Expect = 0.53
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
H S++ + FS DG YLA+ V++VW
Sbjct: 256 HDGSIVVMKFSHDGKYLASAGEDCVVRVW 284
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
FS H GS+ +GK + GED VW++
Sbjct: 253 FSAHDGSIVVMKFSHDGKYLASAGEDCVVRVWNI 286
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 31.9 bits (69), Expect = 0.53
Identities = 19/59 (32%), Positives = 28/59 (47%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHP 704
+ GH V DG +A G D TV++WD+K A Q +N H +V ++ P
Sbjct: 239 MSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLKMRAAI-QTMSN-HNDQVWSVAFRP 295
Score = 31.5 bits (68), Expect = 0.70
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 573 DGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIR 680
+G R+A G DGT+ ++D+ S + HQL + +R
Sbjct: 169 NGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVR 204
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 498 F*NTSGET-KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIW-DIKTSAVTHQLPANVH 671
F SG+ L GH+ KV K D + D TV+IW + N H
Sbjct: 249 FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDH 308
Query: 672 QIRVTAIDIHPDN 710
V A+ +HP N
Sbjct: 309 SAEVRAVTVHPTN 321
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 540 NVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
NV A DG+ + G VKIWD+K+ A + H VTAI
Sbjct: 353 NVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDG--HTGEVTAI 401
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPD 707
L H+ +V + + DGT +D+ + + Q+ + + TA HPD
Sbjct: 305 LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Query: 708 NSLMG 722
++G
Sbjct: 365 GLILG 369
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 31.9 bits (69), Expect = 0.53
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Frame = +3
Query: 498 F*NTSGET-KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIW-DIKTSAVTHQLPANVH 671
F SG+ L GH+ KV K D + D TV+IW + N H
Sbjct: 249 FDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGDGNYACGYTLNDH 308
Query: 672 QIRVTAIDIHPDN 710
V A+ +HP N
Sbjct: 309 SAEVRAVTVHPTN 321
Score = 31.9 bits (69), Expect = 0.53
Identities = 18/51 (35%), Positives = 23/51 (45%)
Frame = +3
Query: 540 NVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
NV A DG+ + G VKIWD+K+ A + H VTAI
Sbjct: 353 NVDYTAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDG--HTGEVTAI 401
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/65 (21%), Positives = 27/65 (41%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPD 707
L H+ +V + + DGT +D+ + + Q+ + + TA HPD
Sbjct: 305 LNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPD 364
Query: 708 NSLMG 722
++G
Sbjct: 365 GLILG 369
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 31.9 bits (69), Expect = 0.53
Identities = 14/37 (37%), Positives = 22/37 (59%)
Frame = +3
Query: 600 EDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
EDG + IWD +T+ + HQ+ VH+ V + +P N
Sbjct: 238 EDGRLVIWDTRTNQMQHQV--KVHEREVNYLSFNPFN 272
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGK-LAVTGGEDDKAYVWSVELV 259
V S H G VF + PN + + + GED + VW + V
Sbjct: 299 VMSSHEGEVFQVEWDPNHETVLASSGEDRRLMVWDLNRV 337
>At5g49430.1 68418.m06116 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 9
(SP:Q9NSI6) {Homo sapiens}; contains Pfam PF00400: WD
domain, G-beta repeat (4 copies)
Length = 1677
Score = 31.5 bits (68), Expect = 0.70
Identities = 15/39 (38%), Positives = 21/39 (53%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS 638
K L+GH V CA L G + G +D VK+W + T+
Sbjct: 239 KRLRGHRNAVYCAILDRSGRYVITGSDDRLVKVWSMDTA 277
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H +V+C L +G+ +TG +D VWS++
Sbjct: 244 HRNAVYCAILDRSGRYVITGSDDRLVKVWSMD 275
Score = 30.3 bits (65), Expect = 1.6
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = +2
Query: 170 VFCCDLHPNGKLAVTGGEDDKAYVWSV 250
+FCC + +G + VTG D A V+SV
Sbjct: 396 IFCCAFNASGSVFVTGSSDTLARVYSV 422
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 31.5 bits (68), Expect = 0.70
Identities = 18/70 (25%), Positives = 28/70 (40%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRV 683
N+ H V D M +G EDGTVKIWD++ + + V
Sbjct: 66 NSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYES---VAAV 122
Query: 684 TAIDIHPDNS 713
+ +HP+ +
Sbjct: 123 NTVVLHPNQT 132
Score = 27.9 bits (59), Expect = 8.6
Identities = 9/30 (30%), Positives = 18/30 (60%)
Frame = +1
Query: 280 NHKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
+H ++V+ VGF D ++ + G +K+W
Sbjct: 76 SHTNNVMAVGFQCDAKWMYSGSEDGTVKIW 105
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 31.5 bits (68), Expect = 0.70
Identities = 19/60 (31%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT-SAVTHQLPANVHQIR 680
NT + L GH + DGV + G +D T ++WDI+ S L N+ IR
Sbjct: 307 NTGKTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLSQSVTVLKGNLGAIR 366
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAID 695
+ +GH V + G + +G + +++WD +T + + +L + +RV +D
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVT 686
T ++ L+GH V L + G +G D +++WD+ H VH V
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA--VHTDSVW 301
Query: 687 AIDIHPDNS 713
A+ +P S
Sbjct: 302 ALACNPSFS 310
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 31.5 bits (68), Expect = 0.70
Identities = 12/57 (21%), Positives = 28/57 (49%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAID 695
+ +GH V + G + +G + +++WD +T + + +L + +RV +D
Sbjct: 208 IAKGHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLD 264
Score = 29.1 bits (62), Expect = 3.7
Identities = 18/69 (26%), Positives = 29/69 (42%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVT 686
T ++ L+GH V L + G +G D +++WD+ H VH V
Sbjct: 244 TGSKSMKLRGHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRCLHTYA--VHTDSVW 301
Query: 687 AIDIHPDNS 713
A+ +P S
Sbjct: 302 ALACNPSFS 310
>At4g35050.1 68417.m04974 WD-40 repeat protein (MSI3) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI3 (SP:O22469) [Arabidopsis thaliana]
Length = 424
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGK-LAVTGGEDDKAYVWSVELV 259
V SKH G VF + PN + + + GED + VW + V
Sbjct: 300 VLSKHEGEVFQVEWDPNHETVLASSGEDRRLMVWDINRV 338
Score = 29.1 bits (62), Expect = 3.7
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Frame = +3
Query: 525 VLQGHNVKVECAK--LFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDI 698
V +GH +E + + + +AG +D + IWD++T+ + HQ+ VH+ + +
Sbjct: 213 VYEGHQSIIEDVAWHMKNENIFGSAG-DDCQLVIWDLRTNQMQHQV--KVHEREINYLSF 269
Query: 699 HPDN 710
+P N
Sbjct: 270 NPFN 273
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 31.1 bits (67), Expect = 0.92
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +2
Query: 170 VFCCDLHPNGKLAVTGGEDDKAYVWSVELVK 262
V CC +GK+ + G D KA +W + +K
Sbjct: 654 VTCCHFSSDGKMLASAGHDKKAVLWYTDTMK 684
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 31.1 bits (67), Expect = 0.92
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H G V HPNG L T G++ K +W +
Sbjct: 280 HPGPVSSVAFHPNGHLMATSGKERKIKIWDL 310
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 31.1 bits (67), Expect = 0.92
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Frame = +3
Query: 510 SGETKV-LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
SG+ K+ +GH+ + + ++ G EDGT +IWD KT
Sbjct: 190 SGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKT 232
>At3g21060.1 68416.m02662 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Retinoblastoma-binding protein 5 (RBBP-5)
[Homo sapiens](RBQ-3)
Length = 547
Score = 30.7 bits (66), Expect = 1.2
Identities = 15/52 (28%), Positives = 25/52 (48%)
Frame = +3
Query: 537 HNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAI 692
H V ++C G +AAG DG IWD +T + ++ N +T++
Sbjct: 23 HGV-IKCVAFNHRGSLLAAGCADGGCVIWDFETRGIAKEIRDNDCSAAITSV 73
>At1g58230.1 68414.m06618 WD-40 repeat family protein / beige-related
contains Pfam PF00400: WD domain, G-beta repeat; similar
to Lipopolysaccharide-responsive and beige-like anchor
protein (CDC4-like protein) (Beige-like protein)
(SP:P50851) [Homo sapiens}
Length = 1280
Score = 30.7 bits (66), Expect = 1.2
Identities = 14/48 (29%), Positives = 20/48 (41%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVH 671
++ H V C + D +A G D TV +WDI + N H
Sbjct: 1042 IRHHKDVVSCVAVTADSTILATGSYDTTVMVWDILRMRTPEKRVRNTH 1089
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Frame = +1
Query: 256 GQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
G+VV +HKD V V + D + LAT + VW
Sbjct: 1036 GRVVQSIRHHKDVVSCVAVTADSTILATGSYDTTVMVW 1073
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 30.3 bits (65), Expect = 1.6
Identities = 9/22 (40%), Positives = 17/22 (77%)
Frame = +3
Query: 579 VRMAAGYEDGTVKIWDIKTSAV 644
+ + AGYEDG++ +WDI+ + +
Sbjct: 232 LHVLAGYEDGSILLWDIRNAKI 253
Score = 23.8 bits (49), Expect(2) = 4.5
Identities = 11/34 (32%), Positives = 15/34 (44%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWD 626
VL+GH V + G DG ++IWD
Sbjct: 12 VLRGHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 23.4 bits (48), Expect(2) = 4.5
Identities = 8/15 (53%), Positives = 11/15 (73%)
Frame = +3
Query: 603 DGTVKIWDIKTSAVT 647
DGTVK WDI+ ++
Sbjct: 84 DGTVKCWDIEDGGLS 98
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 30.3 bits (65), Expect = 1.6
Identities = 16/68 (23%), Positives = 33/68 (48%)
Frame = +3
Query: 516 ETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAID 695
+T+ +Q HN + K DG +A+ ED + IW + + +L + ++ + A +
Sbjct: 405 KTQEIQAHNGSIWSIKFSLDGKYLASAGEDCIIHIWQVVEAEKKGELLLDRPELLLLATN 464
Query: 696 IHPDNSLM 719
P+ + M
Sbjct: 465 GSPEPTTM 472
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/30 (36%), Positives = 17/30 (56%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWK 372
H S+ + FS DG YLA+ +I +W+
Sbjct: 412 HNGSIWSIKFSLDGKYLASAGEDCIIHIWQ 441
>At2g47990.1 68415.m06006 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 5 WD-40 repeats (PF00400); similar to beta
transducin-like protein HET-E2C*4
(GP:17225206)[Podospora anserina]
Length = 530
Score = 30.3 bits (65), Expect = 1.6
Identities = 19/67 (28%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Frame = +3
Query: 522 KVLQGHNVKVECAKL-FTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDI 698
+ L+ H+ K D + + +G +DG VK WD+ + V L H+ V D
Sbjct: 129 RTLRSHSAPARFVKYPVQDKLHLVSGGDDGVVKYWDVAGATVISDLLG--HKDYVRCGDC 186
Query: 699 HPDNSLM 719
P N M
Sbjct: 187 SPVNDSM 193
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 30.3 bits (65), Expect = 1.6
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T + L+GH V + + G EDGTV+IW T + + L + ++
Sbjct: 218 TKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPD 707
+ GH+ V+ L +DG +G DG +++WD+ T T + H V ++ D
Sbjct: 59 MTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVG--HTKDVLSVAFSTD 116
Query: 708 N 710
N
Sbjct: 117 N 117
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/45 (28%), Positives = 22/45 (48%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPA 662
L GH+ + + DG A+G +DG + +WD+ + L A
Sbjct: 189 LAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDLAEGKKLYSLEA 233
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 6/77 (7%)
Frame = +3
Query: 504 NTSGETKVL----QGHNVKVECAKLFTDGV--RMAAGYEDGTVKIWDIKTSAVTHQLPAN 665
NT GE K GH V C + + + + + D TVK+W+++ + + L
Sbjct: 133 NTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNCKLRNTLAG- 191
Query: 666 VHQIRVTAIDIHPDNSL 716
H + + + PD SL
Sbjct: 192 -HSGYLNTVAVSPDGSL 207
Score = 28.3 bits (60), Expect = 6.5
Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 3/44 (6%)
Frame = +3
Query: 507 TSGETKVLQGHNVKV-ECAKL--FTDGVRMAAGYEDGTVKIWDI 629
T G T + G+ KV C L DG + +GY DG +++W I
Sbjct: 282 TDGSTGI--GNKTKVIYCTSLNWSADGNTLFSGYTDGVIRVWGI 323
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 30.3 bits (65), Expect = 1.6
Identities = 21/73 (28%), Positives = 28/73 (38%), Gaps = 2/73 (2%)
Frame = +3
Query: 498 F*NTSGET-KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSA-VTHQLPANVH 671
F SG+ L GH+ KV K D + D TV+IW T + H
Sbjct: 249 FDRPSGQILSTLTGHSKKVTSIKFVGDTDLVLTASSDKTVRIWGCSEDGNYTSRHTLKDH 308
Query: 672 QIRVTAIDIHPDN 710
V A+ +H N
Sbjct: 309 SAEVRAVTVHATN 321
Score = 29.1 bits (62), Expect = 3.7
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 537 HNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSA 641
++V A DG+ + G VKIWD+K+ A
Sbjct: 353 NDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKSQA 387
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 29.9 bits (64), Expect = 2.1
Identities = 14/49 (28%), Positives = 26/49 (53%)
Frame = +3
Query: 573 DGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDNSLM 719
DG+ +++G D + I+DI+ +A + L H+ RV + H L+
Sbjct: 593 DGLHISSGSADPVIHIFDIRYNAPSPSLSMKAHKKRVFKAEWHSSYPLL 641
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/51 (29%), Positives = 25/51 (49%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIR 680
L+GH V D +A+G D TV IW+++T T L ++ ++
Sbjct: 114 LRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVK 164
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Frame = +2
Query: 155 KHVG-SVFCCDLHPNGKLAVTGGEDDKA 235
KH G +F D+ PNG+ TGG D K+
Sbjct: 10 KHEGLQIFSIDVQPNGERFATGGGDHKS 37
>At2g18900.1 68415.m02205 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to LACK protective antigen (GI:13625467)
[Leishmania donovani]
Length = 804
Score = 29.9 bits (64), Expect = 2.1
Identities = 17/54 (31%), Positives = 24/54 (44%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMW 444
H V + FS DG+YL + GV+ VW+ G + I L + MW
Sbjct: 282 HSAEVNVLNFSSDGAYLYSGGREGVLVVWQLDTGKKKF---LPRIGSPLLYFMW 332
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H+ F HPNG++ TG +D +W V
Sbjct: 318 HLDYSFSSAWHPNGQILATGNQDTTCRLWDV 348
>At5g52250.1 68418.m06485 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to photomorphogenesis repressor PnCOP1
(GI:11127996) [Ipomoea nil]
Length = 385
Score = 29.5 bits (63), Expect = 2.8
Identities = 15/35 (42%), Positives = 19/35 (54%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
VL GH V A+ F D + G DG++K WDI
Sbjct: 251 VLDGHTKTVTYAR-FMDSHTIVTGSTDGSLKQWDI 284
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/35 (34%), Positives = 21/35 (60%)
Frame = +1
Query: 277 VNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSD 381
V+H D+V + S DG+ L +V +K+W+ +D
Sbjct: 162 VHHVDAVSGLALSRDGTLLYSVSWDRTLKIWRTTD 196
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 29.5 bits (63), Expect = 2.8
Identities = 17/68 (25%), Positives = 27/68 (39%)
Frame = +3
Query: 453 C*SFDMWGCFGRYLHF*NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIK 632
C W CF + G K L+G + KLF+ + DGT+++WD
Sbjct: 109 CQFLHSWSCFPGLAMVASLEGHNKELKGIALPEGSDKLFSVSI-------DGTLRVWDCN 161
Query: 633 TSAVTHQL 656
+ H +
Sbjct: 162 SGQCVHSI 169
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = +3
Query: 528 LQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
L+GH+ +V C + G + +G D T+K+WD+ T
Sbjct: 254 LEGHSGEVTCFAV--GGQMLYSGSVDKTIKMWDLNT 287
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +3
Query: 489 YLHF*NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIK 632
Y N S V GH V K ++ +A+ D T+++WD+K
Sbjct: 532 YYDLRNISQPLHVFSGHKKAVSYVKFLSNN-ELASASTDSTLRLWDVK 578
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
VL GHN V CA + + D TV++WDI
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 247
F +H G V H + L V+GG+D K VW+
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN 79
Score = 27.9 bits (59), Expect = 8.6
Identities = 12/39 (30%), Positives = 16/39 (41%)
Frame = +2
Query: 146 VFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVELVK 262
V + H V C HP L V+ D VW + +K
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGALK 168
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 525 VLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
VL GHN V CA + + D TV++WDI
Sbjct: 130 VLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 28.3 bits (60), Expect = 6.5
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +2
Query: 149 FSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWS 247
F +H G V H + L V+GG+D K VW+
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWN 79
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 1/36 (2%)
Frame = +1
Query: 280 NHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYS-DG 384
+H D V F+ FS +G YLA+ +W+ S DG
Sbjct: 272 SHTDEVWFLQFSHNGKYLASSSKDQTAIIWEISADG 307
>At5g01770.1 68418.m00096 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein mip1
(SP:P87141) [Schizosaccharomyces pombe]
Length = 1354
Score = 29.1 bits (62), Expect = 3.7
Identities = 9/20 (45%), Positives = 18/20 (90%)
Frame = +3
Query: 576 GVRMAAGYEDGTVKIWDIKT 635
G ++AAG+ DG+V+++D++T
Sbjct: 1183 GSQLAAGFADGSVRLYDVRT 1202
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = +1
Query: 259 QVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
++V E H D + + FS DG ++ + M G +++W
Sbjct: 548 KMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIW 584
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 29.1 bits (62), Expect = 3.7
Identities = 22/84 (26%), Positives = 36/84 (42%), Gaps = 1/84 (1%)
Frame = +1
Query: 274 CVNHKDSVIFVGFSF-DGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSFGMWHF 450
C + + VG F S L+ + SG I W + T P Y + + +
Sbjct: 32 CASPAHGLTAVGEKFLASSQLSARNTSGSIFYWSW---TKPQAEVKSYPVEPIKALAANN 88
Query: 451 GAKVLICGAVSGDIYIFKILPAKL 522
L+ G +SGDIY++++ KL
Sbjct: 89 EGTYLVGGGISGDIYLWEVATGKL 112
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = +3
Query: 549 VECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+ C DG + +G EDG V +WD K+
Sbjct: 266 ITCLAYCADGNLLISGSEDGVVCVWDPKS 294
Score = 27.9 bits (59), Expect = 8.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +3
Query: 522 KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI 629
K GH V C D + +G +DG++++W +
Sbjct: 114 KKWHGHYRSVTCLVFSGDDSLLVSGSQDGSIRVWSL 149
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/33 (39%), Positives = 17/33 (51%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSD 381
HK S+ V +S DG + TV K+W SD
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDISD 263
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/31 (32%), Positives = 16/31 (51%)
Frame = +2
Query: 158 HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
H GS++ P+GK +T D A +W +
Sbjct: 231 HKGSIYAVSWSPDGKQVLTVSADKSAKIWDI 261
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 534 GHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSA 641
GH+ V K F D + + D T+K+WD+ SA
Sbjct: 702 GHSKTVSYVK-FVDSSTLVSSSTDNTLKLWDLSMSA 736
Score = 28.3 bits (60), Expect = 6.5
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +3
Query: 582 RMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDI 698
++A+ DG V+IWD+ S + ++ H+ RV +IDI
Sbjct: 598 QIASSNFDGVVQIWDVARSQLVTEM--KEHKKRVWSIDI 634
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 29.1 bits (62), Expect = 3.7
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 576 GVRMAAGYEDGTVKIWDIK 632
G M +G EDG+VKIWD++
Sbjct: 96 GHMMYSGSEDGSVKIWDLR 114
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/35 (31%), Positives = 19/35 (54%)
Frame = +1
Query: 265 VHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
V V+H +V+ VGF + G + + G +K+W
Sbjct: 77 VRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIW 111
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 573 DGVRMAAGYEDGTVKIWDIK 632
DG R+A G DG+++IW +K
Sbjct: 338 DGKRIAGGVGDGSIQIWSLK 357
Score = 28.3 bits (60), Expect = 6.5
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVW 369
H D + V FS DG L + G +KVW
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVW 400
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/22 (45%), Positives = 17/22 (77%)
Frame = +2
Query: 185 LHPNGKLAVTGGEDDKAYVWSV 250
+ P+GK A+ GG+D K +++SV
Sbjct: 319 ISPDGKEAIVGGQDGKLHIYSV 340
>At1g65580.1 68414.m07439 endonuclease/exonuclease/phosphatase
family protein similar to inositol polyphosphate
5-phosphatase II isoform (GI:15418718) [Mus musculus];
contains 6 (5 weak) Pfam: Pf00400 WD domain, G-beta
repeats and Pfam PF03372:
Endonuclease/Exonuclease/phosphatase family
Length = 1101
Score = 29.1 bits (62), Expect = 3.7
Identities = 10/23 (43%), Positives = 17/23 (73%)
Frame = +3
Query: 564 LFTDGVRMAAGYEDGTVKIWDIK 632
+FT R+ GY +GTV++WD++
Sbjct: 451 MFTFCSRLWVGYSNGTVQVWDLE 473
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 29.1 bits (62), Expect = 3.7
Identities = 15/57 (26%), Positives = 25/57 (43%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T + L+GH V + + G EDGTV+IW T + + L + ++
Sbjct: 218 TKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 29.1 bits (62), Expect = 3.7
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +1
Query: 277 VNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSD 381
V+H D+V + S DGS L + K+W+ SD
Sbjct: 189 VHHVDAVSSLALSQDGSLLYSASWDRSFKIWRTSD 223
>At5g45760.2 68418.m05626 transducin family protein / WD-40 repeat
family protein
Length = 334
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 534 GHNVKVECA--KLFTDGVR-MAAGYEDGTVKIWD 626
GHN V C LF + R + +G D TVKIWD
Sbjct: 246 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 279
>At5g45760.1 68418.m05625 transducin family protein / WD-40 repeat
family protein
Length = 360
Score = 28.7 bits (61), Expect = 4.9
Identities = 16/34 (47%), Positives = 19/34 (55%), Gaps = 3/34 (8%)
Frame = +3
Query: 534 GHNVKVECA--KLFTDGVR-MAAGYEDGTVKIWD 626
GHN V C LF + R + +G D TVKIWD
Sbjct: 272 GHNSAVSCVAFSLFQEKGRFLISGGNDKTVKIWD 305
>At2g46560.1 68415.m05808 transducin family protein / WD-40 repeat
family protein similar to CPY (GI:3096961) {Chironomus
thummi}; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies, 3 weak)|9780477|gb|BE522499.1|BE522499
Length = 2471
Score = 28.7 bits (61), Expect = 4.9
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 594 GYEDGTVKIWDIKTSAVTHQLP 659
G +DG VK+WD K + + H P
Sbjct: 2393 GSKDGEVKLWDAKAAKLIHHWP 2414
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 28.7 bits (61), Expect = 4.9
Identities = 11/35 (31%), Positives = 21/35 (60%)
Frame = +3
Query: 531 QGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT 635
+GH V + G +A+G DG+V++W+++T
Sbjct: 420 KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVET 454
>At2g34260.2 68415.m04192 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 296
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 585 MAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+A+G + G VKIWD + + +H+ N H+ ++ + D+
Sbjct: 51 IASGDDKGCVKIWDTRQRSCSHEF--NAHEDYISGMTFASDS 90
>At2g34260.1 68415.m04191 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 353
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/42 (28%), Positives = 24/42 (57%)
Frame = +3
Query: 585 MAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTAIDIHPDN 710
+A+G + G VKIWD + + +H+ N H+ ++ + D+
Sbjct: 108 IASGDDKGCVKIWDTRQRSCSHEF--NAHEDYISGMTFASDS 147
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/50 (26%), Positives = 23/50 (46%)
Frame = +1
Query: 235 LCMVSGIGQVVHECVNHKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDG 384
+C + V+ + H V FS + Y+A+ + I+VW+ S G
Sbjct: 199 VCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQYIASSSLDKTIRVWELSRG 248
Score = 28.7 bits (61), Expect = 4.9
Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 4/39 (10%)
Frame = +1
Query: 268 HECVN----HKDSVIFVGFSFDGSYLATVDMSGVIKVWK 372
H CVN H+ V+ V ++ + LA+ D GV+ VWK
Sbjct: 438 HTCVNKLQGHRFPVMCVAWNHGENLLASSDFYGVVIVWK 476
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 3/42 (7%)
Frame = +2
Query: 134 HSALVFSK---HVGSVFCCDLHPNGKLAVTGGEDDKAYVWSV 250
HS V S H F HPNG + TG +D +W +
Sbjct: 278 HSGKVISSLRGHKDYSFASAWHPNGLILATGNQDTACRLWDI 319
>At5g23730.1 68418.m02782 transducin family protein / WD-40 repeat
family protein contains similarity to photomorphogenesis
repressor protein; contains Pfam PF00400: WD domain,
G-beta repeat (5 copies)
Length = 243
Score = 28.3 bits (60), Expect = 6.5
Identities = 19/76 (25%), Positives = 36/76 (47%), Gaps = 3/76 (3%)
Frame = +1
Query: 283 HKDSVIFVGFSFDGSYLATVDMSGVIKVWKYSDGTDPWPLAFEYIADDLSF---GMWHFG 453
H +V +V F DG + T G +K+W DG +E ++ +F +W G
Sbjct: 112 HTKTVSYVRF-LDGGTVVTAGTDGCLKLWSVEDGR--VIRTYEGHVNNRNFVGLSVWRNG 168
Query: 454 AKVLICGAVSGDIYIF 501
A + CG+ + ++++
Sbjct: 169 A-LFGCGSENNRVFVY 183
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 28.3 bits (60), Expect = 6.5
Identities = 11/40 (27%), Positives = 17/40 (42%)
Frame = +2
Query: 134 HSALVFSKHVGSVFCCDLHPNGKLAVTGGEDDKAYVWSVE 253
H H G ++ P+ L + GED +VW V+
Sbjct: 402 HMCQEIQAHQGGIWTMKFSPDSHLLASAGEDCAIHVWEVQ 441
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 28.3 bits (60), Expect = 6.5
Identities = 20/76 (26%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = +3
Query: 474 GCFGRYLHF*N--TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVT 647
G R++H + T + GH V C + +G D TVK+W+++ A
Sbjct: 240 GGVDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNVEDKAFI 299
Query: 648 HQLPANVHQIRVTAID 695
+ + HQ + AID
Sbjct: 300 TE--NHGHQGEILAID 313
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T + L GH V + + G EDGTV+IW T + + L + ++
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS-AVTHQLPANVHQIR 680
NT + KV + H+ + C + + + +D +K+WD + A T + H +
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 681 VTAIDIHPDNSLMGFNLYR 737
+ N+ +L R
Sbjct: 147 QVVFNPKDTNTFASASLDR 165
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T + L GH V + + G EDGTV+IW T + + L + ++
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS-AVTHQLPANVHQIR 680
NT + KV + H+ + C + + + +D +K+WD + A T + H +
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 681 VTAIDIHPDNSLMGFNLYR 737
+ N+ +L R
Sbjct: 147 QVVFNPKDTNTFASASLDR 165
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 28.3 bits (60), Expect = 6.5
Identities = 15/57 (26%), Positives = 24/57 (42%)
Frame = +3
Query: 507 TSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQI 677
T + L GH V + + G EDGTV+IW T + + L + ++
Sbjct: 218 TKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTYRLENTLNYGLERV 274
Score = 27.9 bits (59), Expect = 8.6
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKTS-AVTHQLPANVHQIR 680
NT + KV + H+ + C + + + +D +K+WD + A T + H +
Sbjct: 87 NTMDKVKVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVM 146
Query: 681 VTAIDIHPDNSLMGFNLYR 737
+ N+ +L R
Sbjct: 147 QVVFNPKDTNTFASASLDR 165
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 28.3 bits (60), Expect = 6.5
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 1/60 (1%)
Frame = +3
Query: 504 NTSGETKVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDIKT-SAVTHQLPANVHQIR 680
NT L GH + DG + G +D T ++WDI+ S L N+ IR
Sbjct: 305 NTGKTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSKSVAVLRGNLGAIR 364
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 28.3 bits (60), Expect = 6.5
Identities = 17/65 (26%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = +3
Query: 513 GETKVLQGHNVKV-ECAKLFTDGVRMAAGYEDGTVKIWDIKTSAVTHQLPANVHQIRVTA 689
G T ++ H+ ++ C D +A D TVK+WD+++ V + N H V
Sbjct: 183 GSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSYRVPLAV-LNGHGYAVRK 241
Query: 690 IDIHP 704
+ P
Sbjct: 242 VKFSP 246
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 507 TSGET-KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI-KTSAVTHQLPANVHQIR 680
++G+T L+GH + +GV A G +D T +IWD K S L N+ +R
Sbjct: 307 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVR 366
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 27.9 bits (59), Expect = 8.6
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Frame = +3
Query: 507 TSGET-KVLQGHNVKVECAKLFTDGVRMAAGYEDGTVKIWDI-KTSAVTHQLPANVHQIR 680
++G+T L+GH + +GV A G +D T +IWD K S L N+ +R
Sbjct: 301 SNGQTIGTLKGHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLSESVAVLKGNLGAVR 360
>At3g13300.2 68416.m01675 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1309
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 310 FSFDGSYLATVDMSGVIKVWKYSDGTD 390
F+ D LA+V + G + VWK S+G++
Sbjct: 211 FAEDVDMLASVSLDGKVFVWKISEGSE 237
>At3g13300.1 68416.m01674 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400);
autoantigen locus HUMAUTANT (GI:533202) [Homo sapiens]
and autoantigen locus HSU17474 (GI:596134) [Homo
sapiens]
Length = 1344
Score = 27.9 bits (59), Expect = 8.6
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +1
Query: 310 FSFDGSYLATVDMSGVIKVWKYSDGTD 390
F+ D LA+V + G + VWK S+G++
Sbjct: 246 FAEDVDMLASVSLDGKVFVWKISEGSE 272
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,587,074
Number of Sequences: 28952
Number of extensions: 411525
Number of successful extensions: 1822
Number of sequences better than 10.0: 125
Number of HSP's better than 10.0 without gapping: 1151
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1812
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1882599200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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