Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30777
(806 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for ... 83 9e-16
U33882-1|AAA79835.1| 82|Homo sapiens beta 1 integrin isoform A... 83 9e-16
BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein pr... 83 9e-16
BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1 (fibro... 83 9e-16
AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1 (fibro... 83 9e-16
M57494-1|AAA52600.1| 761|Homo sapiens platelet glycoprotein III... 82 2e-15
M35999-1|AAA35927.1| 788|Homo sapiens protein ( Human platelet ... 82 2e-15
M20311-1|AAA60122.1| 788|Homo sapiens glycoprotein IIIa protein. 82 2e-15
J02703-1|AAA52589.1| 788|Homo sapiens ITGB3 protein. 82 2e-15
BC127667-1|AAI27668.1| 788|Homo sapiens integrin, beta 3 (plate... 82 2e-15
BC127666-1|AAI27667.1| 788|Homo sapiens integrin, beta 3 (plate... 82 2e-15
U33880-1|AAA79833.1| 85|Homo sapiens beta 1 integrin isoform D... 79 2e-14
M32686-1|AAA67537.1| 762|Homo sapiens glycoprotein IIIa protein. 75 4e-13
U28252-1|AAA81366.1| 50|Homo sapiens beta-1D integrin, cytopla... 73 1e-12
M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit pro... 71 4e-12
BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein. 71 4e-12
AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein. 71 4e-12
X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for ... 55 3e-07
M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein. 55 3e-07
J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein. 55 3e-07
BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein. 55 3e-07
U95204-1|AAB71380.1| 784|Homo sapiens platelet membrane glycopr... 53 1e-06
M25108-1|AAA36121.1| 74|Homo sapiens protein ( Human integrin ... 53 1e-06
U33882-2|AAA79834.1| 109|Homo sapiens beta 1 integrin isoform C... 53 1e-06
U33879-1|AAA79832.1| 73|Homo sapiens beta 1 integrin isoform B... 53 1e-06
Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for ... 52 2e-06
X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit p... 52 2e-06
M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein. 52 2e-06
BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein. 52 2e-06
BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein. 52 2e-06
AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion g... 52 2e-06
AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, be... 52 2e-06
S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit p... 52 3e-06
S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit p... 52 3e-06
M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit p... 52 3e-06
M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit p... 52 3e-06
L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit p... 52 3e-06
BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein. 52 3e-06
M84237-1|AAA74402.1| 26|Homo sapiens integrin beta-1 subunit p... 47 7e-05
M34189-1|AAA59182.1| 38|Homo sapiens ITGB1 protein. 47 9e-05
>X07979-1|CAA30790.1| 798|Homo sapiens protein ( Human mRNA for
integrin beta 1 subunit. ).
Length = 798
Score = 83.4 bits (197), Expect = 9e-16
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDTGENPIYK A +T NP Y GK
Sbjct: 749 LIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK 798
>U33882-1|AAA79835.1| 82|Homo sapiens beta 1 integrin isoform A
protein.
Length = 82
Score = 83.4 bits (197), Expect = 9e-16
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDTGENPIYK A +T NP Y GK
Sbjct: 33 LIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK 82
>BX537407-1|CAD97649.1| 823|Homo sapiens hypothetical protein
protein.
Length = 823
Score = 83.4 bits (197), Expect = 9e-16
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDTGENPIYK A +T NP Y GK
Sbjct: 774 LIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK 823
>BC020057-1|AAH20057.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 83.4 bits (197), Expect = 9e-16
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDTGENPIYK A +T NP Y GK
Sbjct: 749 LIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK 798
>AL365203-2|CAI14426.1| 798|Homo sapiens integrin, beta 1
(fibronectin receptor, beta polypeptide, antigen CD29
includes protein.
Length = 798
Score = 83.4 bits (197), Expect = 9e-16
Identities = 34/50 (68%), Positives = 40/50 (80%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDTGENPIYK A +T NP Y GK
Sbjct: 749 LIWKLLMIIHDRREFAKFEKEKMNAKWDTGENPIYKSAVTTVVNPKYEGK 798
>M57494-1|AAA52600.1| 761|Homo sapiens platelet glycoprotein IIIa
protein.
Length = 761
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 683 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 742
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 743 NPLYKEATSTFTNITYRG 760
>M35999-1|AAA35927.1| 788|Homo sapiens protein ( Human platelet
glycoprotein IIIa (GPIIIa) mRNA, complete cds. ).
Length = 788
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 770 NPLYKEATSTFTNITYRG 787
>M20311-1|AAA60122.1| 788|Homo sapiens glycoprotein IIIa protein.
Length = 788
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 770 NPLYKEATSTFTNITYRG 787
>J02703-1|AAA52589.1| 788|Homo sapiens ITGB3 protein.
Length = 788
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 770 NPLYKEATSTFTNITYRG 787
>BC127667-1|AAI27668.1| 788|Homo sapiens integrin, beta 3 (platelet
glycoprotein IIIa, antigen CD61) protein.
Length = 788
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 770 NPLYKEATSTFTNITYRG 787
>BC127666-1|AAI27667.1| 788|Homo sapiens integrin, beta 3 (platelet
glycoprotein IIIa, antigen CD61) protein.
Length = 788
Score = 82.2 bits (194), Expect = 2e-15
Identities = 37/78 (47%), Positives = 45/78 (57%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDTAN 769
Query: 182 NPIYKQATSTFKNPTYAG 235
NP+YK+ATSTF N TY G
Sbjct: 770 NPLYKEATSTFTNITYRG 787
>U33880-1|AAA79833.1| 85|Homo sapiens beta 1 integrin isoform D
protein.
Length = 85
Score = 79.0 bits (186), Expect = 2e-14
Identities = 32/50 (64%), Positives = 38/50 (76%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
++WK+ IHDRREFA+FEKE+M AKWDT ENPIYK + FKNP Y K
Sbjct: 33 LIWKLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNYGRK 82
>M32686-1|AAA67537.1| 762|Homo sapiens glycoprotein IIIa protein.
Length = 762
Score = 74.5 bits (175), Expect = 4e-13
Identities = 31/46 (67%), Positives = 37/46 (80%)
Frame = +2
Query: 98 KMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAG 235
K+ TIHDR+EFA+FE+ER AKWDT NP+YK+ATSTF N TY G
Sbjct: 716 KLLITIHDRKEFAKFEEERARAKWDTANNPLYKEATSTFTNITYRG 761
>U28252-1|AAA81366.1| 50|Homo sapiens beta-1D integrin,
cytoplasmic domain protein.
Length = 50
Score = 72.9 bits (171), Expect = 1e-12
Identities = 31/47 (65%), Positives = 35/47 (74%)
Frame = +2
Query: 98 KMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYAGK 238
K+ IHDRREFA+FEKE+M AKWDT ENPIYK + FKNP Y K
Sbjct: 1 KLLMIIHDRREFAKFEKEKMNAKWDTQENPIYKSPINNFKNPNYGRK 47
>M35198-1|AAA36122.2| 788|Homo sapiens integrin beta-subunit
protein.
Length = 788
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E++CPK +WK+ + HDR+E A+FE ER AKW TG
Sbjct: 699 EKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGT 758
Query: 182 NPIYKQATSTFKNPTY 229
NP+Y+ +TSTFKN TY
Sbjct: 759 NPLYRGSTSTFKNVTY 774
>BC121178-1|AAI21179.1| 788|Homo sapiens integrin, beta 6 protein.
Length = 788
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E++CPK +WK+ + HDR+E A+FE ER AKW TG
Sbjct: 699 EKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGT 758
Query: 182 NPIYKQATSTFKNPTY 229
NP+Y+ +TSTFKN TY
Sbjct: 759 NPLYRGSTSTFKNVTY 774
>AC080166-2|AAY24053.1| 449|Homo sapiens unknown protein.
Length = 449
Score = 71.3 bits (167), Expect = 4e-12
Identities = 31/76 (40%), Positives = 41/76 (53%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGE 181
E++CPK +WK+ + HDR+E A+FE ER AKW TG
Sbjct: 360 EKDCPKPPNIPMIMLGVSLAILLIGVVLLCIWKLLVSFHDRKEVAKFEAERSKAKWQTGT 419
Query: 182 NPIYKQATSTFKNPTY 229
NP+Y+ +TSTFKN TY
Sbjct: 420 NPLYRGSTSTFKNVTY 435
>X53002-1|CAA37188.1| 799|Homo sapiens protein ( Human mRNA for
integrin beta-5 subunit. ).
Length = 799
Score = 54.8 bits (126), Expect = 3e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 92 LWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATST 211
+WK+ TIHDRREFA+F+ ER A+++ NP+Y++ ST
Sbjct: 741 IWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>M35011-1|AAA52707.1| 796|Homo sapiens ITGB5 protein.
Length = 796
Score = 54.8 bits (126), Expect = 3e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 92 LWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATST 211
+WK+ TIHDRREFA+F+ ER A+++ NP+Y++ ST
Sbjct: 741 IWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>J05633-1|AAA59183.1| 799|Homo sapiens ITGB5 protein.
Length = 799
Score = 54.8 bits (126), Expect = 3e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 92 LWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATST 211
+WK+ TIHDRREFA+F+ ER A+++ NP+Y++ ST
Sbjct: 741 IWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>BC006541-1|AAH06541.1| 799|Homo sapiens integrin, beta 5 protein.
Length = 799
Score = 54.8 bits (126), Expect = 3e-07
Identities = 20/40 (50%), Positives = 30/40 (75%)
Frame = +2
Query: 92 LWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATST 211
+WK+ TIHDRREFA+F+ ER A+++ NP+Y++ ST
Sbjct: 741 IWKLLVTIHDRREFAKFQSERSRARYEMASNPLYRKPIST 780
>U95204-1|AAB71380.1| 784|Homo sapiens platelet membrane
glycoprotein IIIa beta subunit protein.
Length = 784
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDT 175
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 710 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDT 767
>M25108-1|AAA36121.1| 74|Homo sapiens protein ( Human integrin
beta-3 subunit mRNA, 3' end. ).
Length = 74
Score = 53.2 bits (122), Expect = 1e-06
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = +2
Query: 2 ERECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDT 175
E ECPK ++WK+ TIHDR+EFA+FE+ER AKWDT
Sbjct: 4 EPECPKGPDILVVLLSVMGAILLIGLAALLIWKLLITIHDRKEFAKFEEERARAKWDT 61
>U33882-2|AAA79834.1| 109|Homo sapiens beta 1 integrin isoform C
protein.
Length = 109
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDT 175
++WK+ IHDRREFA+FEKE+M AKWDT
Sbjct: 33 LIWKLLMIIHDRREFAKFEKEKMNAKWDT 61
>U33879-1|AAA79832.1| 73|Homo sapiens beta 1 integrin isoform B
protein.
Length = 73
Score = 52.8 bits (121), Expect = 1e-06
Identities = 20/29 (68%), Positives = 25/29 (86%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDT 175
++WK+ IHDRREFA+FEKE+M AKWDT
Sbjct: 33 LIWKLLMIIHDRREFAKFEKEKMNAKWDT 61
>Y00057-1|CAA68266.1| 761|Homo sapiens protein ( Human mRNA for
beta-subunit of cell surface adhesion glycoproteins
LFA-1, CR3 and p150,95. ).
Length = 761
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 713 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 759
>X64072-1|CAA45427.1| 769|Homo sapiens integrin beta-2 subunit
protein.
Length = 769
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 767
>M15395-1|AAA59490.1| 769|Homo sapiens LYAM1 protein.
Length = 769
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 767
>BC021077-1|AAH21077.1| 758|Homo sapiens ITGB2 protein protein.
Length = 758
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 710 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 756
>BC005861-1|AAH05861.1| 769|Homo sapiens ITGB2 protein protein.
Length = 769
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 767
>AL163300-3|CAB90553.1| 769|Homo sapiens cell surface adhesion
glycoprotein (LFA-1/CR3/P150,959 beta subunit precursor)
protein.
Length = 769
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 767
>AK222505-1|BAD96225.1| 769|Homo sapiens integrin beta chain, beta
2 precursor variant protein.
Length = 769
Score = 52.4 bits (120), Expect = 2e-06
Identities = 20/48 (41%), Positives = 34/48 (70%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTYA 232
++WK + D RE+ RFEKE++ ++W+ +NP++K AT+T NP +A
Sbjct: 721 VIWKALIHLSDLREYRRFEKEKLKSQWN-NDNPLFKSATTTVMNPKFA 767
>S80335-1|AAB21332.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>S49378-1|AAB23688.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>M68892-1|AAA59184.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>M62880-1|AAA59185.1| 798|Homo sapiens integrin beta-7 subunit
protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>L23823-1|AAA36118.1| 798|Homo sapiens integrin beta 7 subunit
protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>BC015916-1|AAH15916.1| 798|Homo sapiens ITGB7 protein protein.
Length = 798
Score = 51.6 bits (118), Expect = 3e-06
Identities = 19/47 (40%), Positives = 31/47 (65%)
Frame = +2
Query: 89 MLWKMATTIHDRREFARFEKERMMAKWDTGENPIYKQATSTFKNPTY 229
+ ++++ I+DRRE++RFEKE+ W NP+YK A +T NP +
Sbjct: 744 LAYRLSVEIYDRREYSRFEKEQQQLNWKQDSNPLYKSAITTTINPRF 790
>M84237-1|AAA74402.1| 26|Homo sapiens integrin beta-1 subunit
protein.
Length = 26
Score = 47.2 bits (107), Expect = 7e-05
Identities = 19/26 (73%), Positives = 20/26 (76%)
Frame = +2
Query: 161 AKWDTGENPIYKQATSTFKNPTYAGK 238
AKWDTGENPIYK A +T NP Y GK
Sbjct: 1 AKWDTGENPIYKSAVTTVVNPKYEGK 26
>M34189-1|AAA59182.1| 38|Homo sapiens ITGB1 protein.
Length = 38
Score = 46.8 bits (106), Expect = 9e-05
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = +2
Query: 98 KMATTIHDRREFARFEKERMMAKWDT 175
K+ IHDRREFA+FEKE+M AKWDT
Sbjct: 1 KLLMIIHDRREFAKFEKEKMNAKWDT 26
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,692,104
Number of Sequences: 237096
Number of extensions: 2358728
Number of successful extensions: 3959
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 3832
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3950
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9980595722
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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