Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30777
         (806 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical pr...    93   2e-19
U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta p...    93   2e-19
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    32   0.42 
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr...    29   3.9  
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p...    29   3.9  
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n...    29   3.9  
U23450-8|AAK31471.1|  350|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical pr...    28   9.0  
AF022980-12|AAG24186.1|  515|Caenorhabditis elegans Hypothetical...    28   9.0  
AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical ...    28   9.0  
AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical ...    28   9.0  
AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical ...    28   9.0  
AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical ...    28   9.0  

>Z35604-2|CAA84677.1|  809|Caenorhabditis elegans Hypothetical
           protein ZK1058.2 protein.
          Length = 809

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 40/78 (51%), Positives = 48/78 (61%)
 Frame = +2

Query: 5   RECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGEN 184
           ++CP  VP                    +LWK+ T +HDR E+A F  ER+MAKWDT EN
Sbjct: 730 KDCPPPVPVLAIVLGVIAGIVILGILLLLLWKLLTVLHDRSEYATFNNERLMAKWDTNEN 789

Query: 185 PIYKQATSTFKNPTYAGK 238
           PIYKQAT+TFKNP YAGK
Sbjct: 790 PIYKQATTTFKNPVYAGK 807


>U19744-1|AAA85704.1|  809|Caenorhabditis elegans integrin beta
           pat-3 protein.
          Length = 809

 Score = 93.5 bits (222), Expect = 2e-19
 Identities = 40/78 (51%), Positives = 48/78 (61%)
 Frame = +2

Query: 5   RECPKKVPXXXXXXXXXXXXXXXXXXXXMLWKMATTIHDRREFARFEKERMMAKWDTGEN 184
           ++CP  VP                    +LWK+ T +HDR E+A F  ER+MAKWDT EN
Sbjct: 730 KDCPPPVPVLAIVLGVIAGIVILGILLLLLWKLLTVLHDRSEYATFNNERLMAKWDTNEN 789

Query: 185 PIYKQATSTFKNPTYAGK 238
           PIYKQAT+TFKNP YAGK
Sbjct: 790 PIYKQATTTFKNPVYAGK 807


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
           protein 2 protein.
          Length = 1080

 Score = 32.3 bits (70), Expect = 0.42
 Identities = 15/45 (33%), Positives = 26/45 (57%)
 Frame = -2

Query: 271 IQKNSFEGTLLFSGVSWILERRRRLLVNWILARIPFGHHTFLFEA 137
           I+K+  EG + F+ + ++      L+  +IL R+P+ H  FLF A
Sbjct: 693 IKKSKLEGVMAFNSLIFLPSCVSHLVSVFILYRLPYSHRCFLFFA 737


>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
           protein C01C7.1 protein.
          Length = 1043

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 190 LQASDVDVQESNLRRKIKVCLRNCSFVFYV 279
           LQA+D+   ES+LRRK+K  LRN + + YV
Sbjct: 18  LQAADLSGYESDLRRKLK--LRNAADLQYV 45


>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
            protein F41G3.12 protein.
          Length = 1483

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 12/29 (41%), Positives = 18/29 (62%)
 Frame = -1

Query: 506  ISHESNSFSYRKRIDSKAQIKYKNDISLK 420
            ISHE+   S+++R+DS   I Y   + LK
Sbjct: 1027 ISHENRRISWQRRVDSLQTIAYNVSLELK 1055


>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
           non-receptor tyrosinekinase protein.
          Length = 1043

 Score = 29.1 bits (62), Expect = 3.9
 Identities = 16/30 (53%), Positives = 22/30 (73%)
 Frame = +1

Query: 190 LQASDVDVQESNLRRKIKVCLRNCSFVFYV 279
           LQA+D+   ES+LRRK+K  LRN + + YV
Sbjct: 18  LQAADLSGYESDLRRKLK--LRNAADLQYV 45


>U23450-8|AAK31471.1|  350|Caenorhabditis elegans Hypothetical
           protein C30B5.7 protein.
          Length = 350

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 19/75 (25%), Positives = 32/75 (42%)
 Frame = -2

Query: 697 IISRNLTVQNKMSHGVSDLV*YGTFASYLYHSKILFSLG*HTNFFYYYFWNIYLIFCILM 518
           + +RN TV   ++HG  DL+ Y    + L     L +      F  Y  +    +  IL+
Sbjct: 15  MFTRNETVNTSVTHGFEDLITYHIVNTSLGAISTLVNTLLMIIFLGYRPFRTRYVLLILL 74

Query: 517 NIQTLVMKAIVFPTG 473
           N+  L+    +  TG
Sbjct: 75  NVGDLINSMAIVLTG 89


>Z75711-4|CAB00030.1|  134|Caenorhabditis elegans Hypothetical
           protein K02B12.6 protein.
          Length = 134

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/42 (30%), Positives = 20/42 (47%), Gaps = 1/42 (2%)
 Frame = -2

Query: 163 GHHTFLFEACELSSVVYGGGHLPQH-QQRQPDQHYGGDHAQD 41
           G H   +      +  YGG H   + +Q + D ++GGDH  D
Sbjct: 90  GGHNDYYTKYNQYTPYYGGSHQQNYYEQPKHDDYHGGDHHYD 131


>AF022980-12|AAG24186.1|  515|Caenorhabditis elegans Hypothetical
           protein T03D3.1 protein.
          Length = 515

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
 Frame = -2

Query: 565 FYYYFWNIYL-IFCILMNIQTLVMKAIVFPT 476
           FYYY  +I L +FCIL  I   V++ I  P+
Sbjct: 479 FYYYCGDILLLVFCILFIILHTVLRTINLPS 509


>AC006762-4|AAU20835.1|  484|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4c protein.
          Length = 484

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 94  VEDGHHHTRPTRVRTLRKGTYDGQMGYGRESN 189
           VE  HH  +PTR  ++R  +    +G G+ ++
Sbjct: 322 VEQDHHSLQPTRTASVRSSSLSSYVGGGKRNS 353


>AC006762-3|AAU20834.1|  614|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4b protein.
          Length = 614

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 94  VEDGHHHTRPTRVRTLRKGTYDGQMGYGRESN 189
           VE  HH  +PTR  ++R  +    +G G+ ++
Sbjct: 452 VEQDHHSLQPTRTASVRSSSLSSYVGGGKRNS 483


>AC006762-2|AAF60558.2|  607|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4a protein.
          Length = 607

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 94  VEDGHHHTRPTRVRTLRKGTYDGQMGYGRESN 189
           VE  HH  +PTR  ++R  +    +G G+ ++
Sbjct: 445 VEQDHHSLQPTRTASVRSSSLSSYVGGGKRNS 476


>AC006762-1|AAU87813.1|  514|Caenorhabditis elegans Hypothetical
           protein Y42G9A.4d protein.
          Length = 514

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 10/32 (31%), Positives = 18/32 (56%)
 Frame = +1

Query: 94  VEDGHHHTRPTRVRTLRKGTYDGQMGYGRESN 189
           VE  HH  +PTR  ++R  +    +G G+ ++
Sbjct: 352 VEQDHHSLQPTRTASVRSSSLSSYVGGGKRNS 383


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,042,845
Number of Sequences: 27780
Number of extensions: 381032
Number of successful extensions: 1025
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1025
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1977346024
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)