Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30775
         (829 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate 1-deca...    22   5.2  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    22   6.8  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    22   6.8  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.0  

>EU019709-1|ABU25221.1|  540|Tribolium castaneum aspartate
           1-decarboxylase protein.
          Length = 540

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -3

Query: 707 WNSHSLLSSGQTC 669
           WN H LL++ Q C
Sbjct: 348 WNPHKLLTAPQQC 360


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 5/12 (41%), Positives = 8/12 (66%)
 Frame = -1

Query: 193 KYLCYWAHWAVH 158
           K +CYW  W+ +
Sbjct: 25  KVVCYWGTWSTY 36


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -1

Query: 724 FNDHTFGTPILYCLVDKLVESSTNGKYSGNGMHDYK 617
           F  H     I +  V    +S+ NG+   N +H YK
Sbjct: 118 FGAHWMKESISFAKVKLTNKSNGNGQIMLNSLHKYK 153


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 7/18 (38%), Positives = 13/18 (72%)
 Frame = -3

Query: 536 FRQIAQLSTKYPKPRVLL 483
           +R++  L  ++PK +VLL
Sbjct: 86  YRKVTDLKKRFPKLKVLL 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 208,027
Number of Sequences: 336
Number of extensions: 4739
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22725411
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)