Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30775
         (829 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles ...    29   0.23 
AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsiv...    24   5.0  
CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein...    24   6.6  

>M93689-1|AAA29368.1|  442|Anopheles gambiae protein ( Anopheles
           gambiae T1 retroposon. ).
          Length = 442

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 14/41 (34%), Positives = 17/41 (41%)
 Frame = +1

Query: 523 AICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHC 645
           ++C    +  C  C A   SA S  C    GVC    H HC
Sbjct: 27  SVCAVSFVMQCSTCNAPTDSANSVSCA---GVCGSKHHTHC 64


>AY496421-1|AAS80138.1|  439|Anopheles gambiae bacteria responsive
           protein 2 protein.
          Length = 439

 Score = 24.2 bits (50), Expect = 5.0
 Identities = 9/18 (50%), Positives = 13/18 (72%)
 Frame = -3

Query: 536 FRQIAQLSTKYPKPRVLL 483
           +R + QL +KYP  +VLL
Sbjct: 90  YRTVTQLKSKYPSLKVLL 107


>CR954257-11|CAJ14162.1|  415|Anopheles gambiae predicted protein
           protein.
          Length = 415

 Score = 23.8 bits (49), Expect = 6.6
 Identities = 9/23 (39%), Positives = 15/23 (65%)
 Frame = +3

Query: 231 QLCATLLYPLCTLQKHVYIHTYA 299
           ++C  LL+   TL ++V+ H YA
Sbjct: 65  EMCIALLHDFDTLYQNVHDHRYA 87


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 916,684
Number of Sequences: 2352
Number of extensions: 19822
Number of successful extensions: 29
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 88150236
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)