Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30775
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical pr... 159 2e-39
AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finge... 159 2e-39
U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical p... 54 2e-07
Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical pr... 44 2e-04
Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical p... 44 2e-04
AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical ... 39 0.005
AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical ... 38 0.009
AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical ... 37 0.015
Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical pr... 36 0.027
Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical p... 36 0.027
U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical pr... 36 0.027
U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical p... 36 0.027
AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical ... 36 0.047
Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical pr... 35 0.062
AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical ... 35 0.082
AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical ... 35 0.082
AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical ... 33 0.25
Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical pr... 32 0.44
AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical ... 32 0.44
AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical... 32 0.58
AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical ... 31 1.0
U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of pr... 30 1.8
AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical ... 30 1.8
Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical pr... 30 2.3
AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical ... 30 2.3
AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical... 30 2.3
AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical... 30 2.3
U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine rece... 29 3.1
AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical ... 29 3.1
Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical p... 29 4.1
U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical pr... 29 4.1
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 29 4.1
AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical ... 29 5.4
Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical pr... 28 7.1
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 28 7.1
U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical pr... 28 7.1
Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 28 9.4
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 28 9.4
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 28 9.4
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 28 9.4
>Z70757-5|CAA94801.1| 110|Caenorhabditis elegans Hypothetical
protein ZK287.5 protein.
Length = 110
Score = 159 bits (386), Expect = 2e-39
Identities = 67/89 (75%), Positives = 71/89 (79%)
Frame = +1
Query: 454 KKIRSKKVECSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAF 633
K+ KK + VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHAF
Sbjct: 22 KRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAF 81
Query: 634 HFHCISRWLKTRQVCPLDNREWEFQKYGH 720
HFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 82 HFHCISRWLKTRQVCPLDNREWEFQKYGH 110
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KKRFEVKKWNAVALWAWDI 508
KKRFEVKKW+AVALWAWDI
Sbjct: 21 KKRFEVKKWSAVALWAWDI 39
>AB077287-1|BAB83695.1| 101|Caenorhabditis elegans RING-H2 finger
protein Rbx1 protein.
Length = 101
Score = 159 bits (386), Expect = 2e-39
Identities = 67/89 (75%), Positives = 71/89 (79%)
Frame = +1
Query: 454 KKIRSKKVECSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAF 633
K+ KK + VDNCAICRNHIMDLCIECQANQA+ +ECTVAWG CNHAF
Sbjct: 13 KRFEVKKWSAVALWAWDIQVDNCAICRNHIMDLCIECQANQAAGLKDECTVAWGNCNHAF 72
Query: 634 HFHCISRWLKTRQVCPLDNREWEFQKYGH 720
HFHCISRWLKTRQVCPLDNREWEFQKYGH
Sbjct: 73 HFHCISRWLKTRQVCPLDNREWEFQKYGH 101
Score = 46.0 bits (104), Expect = 3e-05
Identities = 18/19 (94%), Positives = 19/19 (100%)
Frame = +2
Query: 452 KKRFEVKKWNAVALWAWDI 508
KKRFEVKKW+AVALWAWDI
Sbjct: 12 KKRFEVKKWSAVALWAWDI 30
>U80449-2|AAB37826.1| 112|Caenorhabditis elegans Hypothetical
protein R10A10.2 protein.
Length = 112
Score = 76.6 bits (180), Expect = 2e-14
Identities = 29/62 (46%), Positives = 40/62 (64%)
Frame = +1
Query: 514 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 693
D CAICR H+M+ C+ CQ S S EC V WG CNH+FH C+++W++ CPL +
Sbjct: 48 DTCAICRVHLMEECLRCQ----SEPSAECYVVWGDCNHSFHHCCMTQWIRQNNRCPLCQK 103
Query: 694 EW 699
+W
Sbjct: 104 DW 105
Score = 36.3 bits (80), Expect = 0.027
Identities = 12/30 (40%), Positives = 19/30 (63%)
Frame = +2
Query: 449 DKKRFEVKKWNAVALWAWDILSTTVLFAEI 538
+ + F +KKWNA+A+WAWD+ T +
Sbjct: 26 ESRPFVLKKWNALAVWAWDVECDTCAICRV 55
>Z46242-13|CAA86328.1| 135|Caenorhabditis elegans Hypothetical
protein F35G12.9 protein.
Length = 135
Score = 53.6 bits (123), Expect = 2e-07
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 5/67 (7%)
Frame = +1
Query: 514 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWL-----KTRQVC 678
D C ICR C N ++C + G+C HAFH HCI +W+ + R C
Sbjct: 70 DTCGICRMEFESAC-----NMCKFPGDDCPLVLGICRHAFHRHCIDKWIAAPTNQPRAQC 124
Query: 679 PLDNREW 699
PL ++W
Sbjct: 125 PLCRQDW 131
>Z99772-2|CAB16922.2| 2162|Caenorhabditis elegans Hypothetical protein
H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 601 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 693
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>Z75533-11|CAA99823.2| 2162|Caenorhabditis elegans Hypothetical
protein H05L14.2 protein.
Length = 2162
Score = 43.6 bits (98), Expect = 2e-04
Identities = 16/31 (51%), Positives = 19/31 (61%)
Frame = +1
Query: 601 TVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 693
TV C +H+HCISRWLK VCP +R
Sbjct: 2120 TVTCDTCTREYHYHCISRWLKINSVCPQCSR 2150
>AC024806-4|AAF59525.1| 192|Caenorhabditis elegans Hypothetical
protein Y52E8A.2 protein.
Length = 192
Score = 38.7 bits (86), Expect = 0.005
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +1
Query: 589 SEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNR 693
S E T+ C FH C S+W K + VCP NR
Sbjct: 147 STEKTIKCNSCRRRFHLDCASQWFKEKSVCPACNR 181
>AC024812-2|AAF59555.1| 304|Caenorhabditis elegans Hypothetical
protein Y54E10BR.3 protein.
Length = 304
Score = 37.9 bits (84), Expect = 0.009
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPL 684
CNH FH CI WLKT+ CP+
Sbjct: 256 CNHIFHRPCIEPWLKTKNSCPV 277
>AL031620-4|CAA20925.1| 456|Caenorhabditis elegans Hypothetical
protein C18B12.4 protein.
Length = 456
Score = 37.1 bits (82), Expect = 0.015
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Frame = +1
Query: 619 CNHAFHFHCISRWL-KTRQVCPLDNRE 696
C H FH +CI WL +TR++CPL R+
Sbjct: 265 CRHVFHCNCIDVWLTQTRKICPLCKRK 291
>Z72511-3|CAA96657.1| 610|Caenorhabditis elegans Hypothetical
protein F55A11.3 protein.
Length = 610
Score = 36.3 bits (80), Expect = 0.027
Identities = 10/21 (47%), Positives = 14/21 (66%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C+H FH HC+ W + +Q CP
Sbjct: 310 CSHVFHAHCLRSWFQRQQTCP 330
>Z11115-11|CAA77447.1| 161|Caenorhabditis elegans Hypothetical
protein ZK637.14 protein.
Length = 161
Score = 36.3 bits (80), Expect = 0.027
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C H FH+ C++ WL+ +Q CP
Sbjct: 111 CKHRFHYFCLTLWLEAQQTCP 131
>U80836-7|AAB37893.3| 451|Caenorhabditis elegans Hypothetical
protein B0432.13 protein.
Length = 451
Score = 36.3 bits (80), Expect = 0.027
Identities = 11/22 (50%), Positives = 16/22 (72%)
Frame = +1
Query: 616 VCNHAFHFHCISRWLKTRQVCP 681
VC H +H CIS+W+ T++ CP
Sbjct: 30 VCGHIYHHGCISQWIATKRQCP 51
>U23511-13|AAC46800.1| 770|Caenorhabditis elegans Hypothetical
protein C32D5.11 protein.
Length = 770
Score = 36.3 bits (80), Expect = 0.027
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +1
Query: 556 IECQANQASATSEECTVAWGVCNHAFHFHCISRWL--KTRQVCPLDNREWEFQKY 714
++C ++ S+EC + CNH+F F CIS W+ R CP+ ++ + Y
Sbjct: 66 LQCTICLSTRFSQECRIEG--CNHSFCFSCISEWVCQSLRPSCPMCRKDVDKVSY 118
>AF047662-7|AAC04439.1| 955|Caenorhabditis elegans Hypothetical
protein T22B2.1 protein.
Length = 955
Score = 35.5 bits (78), Expect = 0.047
Identities = 12/44 (27%), Positives = 19/44 (43%)
Frame = +1
Query: 559 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 690
EC + TV C +H C+ +W K +++CP N
Sbjct: 899 ECLVCLEDMVKNQDTVKCSTCKRQYHTTCVQKWFKIKRICPTCN 942
>Z82062-2|CAB04890.1| 489|Caenorhabditis elegans Hypothetical
protein W02A11.3 protein.
Length = 489
Score = 35.1 bits (77), Expect = 0.062
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPLDNRE 696
CNH FH CI +WL + CP+ E
Sbjct: 451 CNHVFHPECIYKWLDINKRCPMCREE 476
>AL031635-7|CAB54384.2| 487|Caenorhabditis elegans Hypothetical
protein Y47D3B.11 protein.
Length = 487
Score = 34.7 bits (76), Expect = 0.082
Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
Frame = +1
Query: 448 R*KKIRSKKVECSSTLGLGYFVDNCAICRNH-IMDLCIECQANQASATSEECTVAWGVCN 624
R K+ RS SS L + + + A +H + C+ C T E V + C
Sbjct: 281 RLKQHRSSSSRHSSYLAVFGSLTSVAQSSSHSAQERCVICLEEYEEGT--ELRVLF--CG 336
Query: 625 HAFHFHCISRWLKTRQVCPLDNREWEFQKY 714
H FH C+ WL +++ CPL + ++ Y
Sbjct: 337 HEFHPKCVDPWLLSKRRCPLCQFDVVYKHY 366
>AC006712-2|AAK39324.1| 754|Caenorhabditis elegans Hypothetical
protein Y119C1B.5 protein.
Length = 754
Score = 34.7 bits (76), Expect = 0.082
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPL 684
C H FH C+ +WL + VCPL
Sbjct: 620 CKHYFHGPCLRKWLAVKMVCPL 641
>AL110479-9|CAB60315.3| 583|Caenorhabditis elegans Hypothetical
protein Y105C5B.11 protein.
Length = 583
Score = 33.1 bits (72), Expect = 0.25
Identities = 13/41 (31%), Positives = 18/41 (43%)
Frame = +1
Query: 559 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 681
EC + E TV C +H HC ++WL + CP
Sbjct: 527 ECIICREDIDLENGTVQCPRCTEIYHSHCATQWLSQKPTCP 567
>Z46787-7|CAA86745.1| 235|Caenorhabditis elegans Hypothetical
protein C16C10.7 protein.
Length = 235
Score = 32.3 bits (70), Expect = 0.44
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 3/26 (11%)
Frame = +1
Query: 616 VCNHAFHFHCISRWLKTR---QVCPL 684
+C H F + C+S+WL TR QVCP+
Sbjct: 40 LCGHLFCWPCLSQWLDTRPNNQVCPV 65
>AF101318-6|AAC69348.2| 946|Caenorhabditis elegans Hypothetical
protein Y73C8C.8 protein.
Length = 946
Score = 32.3 bits (70), Expect = 0.44
Identities = 12/44 (27%), Positives = 18/44 (40%)
Frame = +1
Query: 559 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDN 690
EC E T+ C +H C +W K +++CP N
Sbjct: 890 ECLVCLEDMMEEHETLKCSNCKRQYHTGCAQKWFKVKRICPTCN 933
>AC024791-32|AAY55887.1| 212|Caenorhabditis elegans Hypothetical
protein Y47G6A.31 protein.
Length = 212
Score = 31.9 bits (69), Expect = 0.58
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPL 684
C H F + C+ WLK++ CP+
Sbjct: 54 CGHTFCYSCLFDWLKSQDTCPM 75
>AF039043-1|AAB94194.1| 5105|Caenorhabditis elegans Hypothetical
protein F39C12.1 protein.
Length = 5105
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/64 (25%), Positives = 30/64 (46%), Gaps = 4/64 (6%)
Frame = +1
Query: 505 YFVDNCAICR----NHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQ 672
+ + C +C N MD ++ N++ + C + CNH H + I+ W +T +
Sbjct: 4985 FSLPRCCVCMCPYLNDHMDFALK-DYNESFSQFSICNI----CNHGGHVNHIATWFETEK 5039
Query: 673 VCPL 684
CP+
Sbjct: 5040 YCPV 5043
>U53147-6|AAA96117.1| 3766|Caenorhabditis elegans Regulator of
presynaptic morphologyprotein 1 protein.
Length = 3766
Score = 30.3 bits (65), Expect = 1.8
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +1
Query: 547 DLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTR 669
D+C+ C + A C + G C H FHFHC+ L+ R
Sbjct: 3515 DVCVICFTERLGAAP--C-IRLG-CGHMFHFHCVRMILERR 3551
>AF078783-6|AAC26923.1| 473|Caenorhabditis elegans Hypothetical
protein H10E21.5 protein.
Length = 473
Score = 30.3 bits (65), Expect = 1.8
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPL 684
C H +H CI WL + CP+
Sbjct: 245 CKHIYHKSCIDPWLLEHRTCPM 266
>Z35595-4|CAA84635.1| 170|Caenorhabditis elegans Hypothetical
protein C01G6.4 protein.
Length = 170
Score = 29.9 bits (64), Expect = 2.3
Identities = 9/21 (42%), Positives = 11/21 (52%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C H+FH C+ WL CP
Sbjct: 113 CMHSFHQECVDEWLMKSFTCP 133
>AF101318-5|AAC69347.1| 574|Caenorhabditis elegans Hypothetical
protein Y73C8C.7 protein.
Length = 574
Score = 29.9 bits (64), Expect = 2.3
Identities = 11/41 (26%), Positives = 17/41 (41%)
Frame = +1
Query: 559 ECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCP 681
EC E T+ C +H C +W K +++CP
Sbjct: 518 ECLVCLEDMKEEHETLKCLDCKRKYHTGCAQKWFKVKRICP 558
>AC006607-11|AAN63459.1| 1080|Caenorhabditis elegans Hypothetical
protein C09E7.8b protein.
Length = 1080
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C FH C ++WL ++ CP
Sbjct: 1044 CRRRFHLECATKWLNEKRECP 1064
>AC006607-10|AAN63458.1| 1114|Caenorhabditis elegans Hypothetical
protein C09E7.8a protein.
Length = 1114
Score = 29.9 bits (64), Expect = 2.3
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C FH C ++WL ++ CP
Sbjct: 1078 CRRRFHLECATKWLNEKRECP 1098
>U64841-1|AAB04845.2| 357|Caenorhabditis elegans Serpentine
receptor, class t protein13 protein.
Length = 357
Score = 29.5 bits (63), Expect = 3.1
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = +1
Query: 475 VECSSTLGLGYFVDNCAICRNHIMDLCIECQAN 573
V C+ ++GLG ++ C C +D C E AN
Sbjct: 108 VFCAGSIGLGSWMGGCVCCILLAVDRCAEINAN 140
>AC006607-7|AAL00855.1| 789|Caenorhabditis elegans Hypothetical
protein C09E7.9 protein.
Length = 789
Score = 29.5 bits (63), Expect = 3.1
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C FH C ++WL ++ CP
Sbjct: 753 CRRRFHLKCATKWLNEKRECP 773
>Z99282-2|CAB16533.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 6 IPWLIYSLHFQWGGCGNLFCAH 71
+ W+I + HF WGG N F +H
Sbjct: 465 VAWVIVANHFGWGGPINAFMSH 486
>Z83129-12|CAB05645.1| 613|Caenorhabditis elegans Hypothetical
protein W06G6.1 protein.
Length = 613
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +3
Query: 6 IPWLIYSLHFQWGGCGNLFCAH 71
+ W+I + HF WGG N F +H
Sbjct: 465 VAWVIVANHFGWGGPINAFMSH 486
>U67953-1|AAQ91892.1| 398|Caenorhabditis elegans Hypothetical
protein ZC13.1b protein.
Length = 398
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCPLDNRE 696
C H F CI WL + CP+ E
Sbjct: 352 CTHVFCKFCIETWLDQKSTCPICRAE 377
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 29.1 bits (62), Expect = 4.1
Identities = 10/22 (45%), Positives = 14/22 (63%), Gaps = 1/22 (4%)
Frame = +1
Query: 616 VCNHAFHFHCISRWL-KTRQVC 678
+CNH+FH C+ +W T VC
Sbjct: 275 LCNHSFHARCLEQWADNTCPVC 296
>AC006607-6|AAF60370.2| 496|Caenorhabditis elegans Hypothetical
protein C09E7.5 protein.
Length = 496
Score = 28.7 bits (61), Expect = 5.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = +1
Query: 619 CNHAFHFHCISRWLKTRQVCP 681
C FH C ++WL ++ CP
Sbjct: 460 CRRRFHSKCATKWLNEKRECP 480
>Z46240-3|CAA86312.1| 309|Caenorhabditis elegans Hypothetical
protein B0272.3 protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 685 LVDKLVESSTNGKYSGNGMHDYK 617
L++ LV+S NG+ SG G + YK
Sbjct: 287 LLNSLVDSGKNGRKSGEGFYKYK 309
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 28.3 bits (60), Expect = 7.1
Identities = 10/27 (37%), Positives = 14/27 (51%)
Frame = +1
Query: 604 VAWGVCNHAFHFHCISRWLKTRQVCPL 684
V + C H+ C RWL + VCP+
Sbjct: 37 VTFLTCKHSICAGCAGRWLSSCSVCPM 63
>U51994-2|AAA96065.3| 1311|Caenorhabditis elegans Hypothetical
protein R03G5.3 protein.
Length = 1311
Score = 28.3 bits (60), Expect = 7.1
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Frame = +1
Query: 553 CIECQANQASATSEECTVAWG--VCNHAFHF 639
C +C+ N S S+ CTV +G + N F++
Sbjct: 23 CTDCKINTISDVSKNCTVVYGDIIVNSTFNY 53
>Z77134-2|CAB00873.1| 877|Caenorhabditis elegans Hypothetical
protein R09H10.4 protein.
Length = 877
Score = 27.9 bits (59), Expect = 9.4
Identities = 16/43 (37%), Positives = 23/43 (53%)
Frame = -1
Query: 361 FIKK*PRVVRLCLVPNSAEVPAYVCMYTCFCKVHKG*SKVAHS 233
F+K VV L L+ VPA++C +T + S+VAHS
Sbjct: 810 FVKTMILVVTLGLIHGLFIVPAFLCAFTAIHQTCFSSSRVAHS 852
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 481 CSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC 621
C + G G F + CA ++ C+EC + + C+ + G C
Sbjct: 493 CKAGFG-GTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC 538
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 481 CSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC 621
C + G G F + CA ++ C+EC + + C+ + G C
Sbjct: 493 CKAGFG-GTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC 538
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 481 CSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC 621
C + G G F + CA ++ C+EC + + C+ + G C
Sbjct: 493 CKAGFG-GTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC 538
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 27.9 bits (59), Expect = 9.4
Identities = 12/47 (25%), Positives = 21/47 (44%)
Frame = +1
Query: 481 CSSTLGLGYFVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVC 621
C + G G F + CA ++ C+EC + + C+ + G C
Sbjct: 493 CKAGFG-GTFCETCADGYTNVTAGCVECVCDATGSEHGNCSASTGQC 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,891,800
Number of Sequences: 27780
Number of extensions: 440615
Number of successful extensions: 1243
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1081
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1241
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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