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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30774
         (867 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g66850.1 68418.m08428 protein kinase family protein contains ...    32   0.57 
At1g20130.1 68414.m02518 family II extracellular lipase, putativ...    30   2.3  
At4g38770.1 68417.m05490 proline-rich family protein (PRP4) simi...    29   3.0  
At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,...    29   4.0  
At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,...    29   4.0  
At2g39870.1 68415.m04899 expressed protein                             29   5.3  
At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid t...    29   5.3  
At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid t...    28   7.0  
At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identic...    28   7.0  
At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identic...    28   7.0  
At1g55070.1 68414.m06290 F-box family protein contains Pfam prof...    28   7.0  
At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi do...    28   7.0  
At2g45810.1 68415.m05697 DEAD/DEAH box helicase, putative              28   9.3  

>At5g66850.1 68418.m08428 protein kinase family protein contains
           Pfam domain, PF00069: Protein kinase domain; identical
           to cDNA MAP3K gamma protein kinase GI:2315152
          Length = 716

 Score = 31.9 bits (69), Expect = 0.57
 Identities = 19/54 (35%), Positives = 24/54 (44%)
 Frame = +3

Query: 285 PQNRNCR*ESSCSLPRRKAHPLPGRKENPLPRESARSPTLPRCQTCPLPS*RDC 446
           PQ R+ R +     P R + PL     +  PR+S  SP  PR  T      RDC
Sbjct: 253 PQPRSPRKQIRSPQPSRPSSPLHSVDSSAPPRDSVSSPLHPRLSTDVTNGRRDC 306


>At1g20130.1 68414.m02518 family II extracellular lipase, putative
           contains Pfam profile PF00657: GDSL-like
           Lipase/Acylhydrolase; similar to EXL3 (PMID:11431566)
          Length = 1006

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/54 (35%), Positives = 22/54 (40%)
 Frame = +1

Query: 640 PVKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKP 801
           P   P  V  P P  +        PC    P+   PKP P PS SP  +P  KP
Sbjct: 6   PDPSPKPVAPPGPSSKPVAPPGPSPCPSPPPKPQ-PKPPPAPSPSPCPSPPPKP 58



 Score = 29.9 bits (64), Expect = 2.3
 Identities = 19/55 (34%), Positives = 23/55 (41%)
 Frame = +1

Query: 640 PVKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKPV 804
           P   P   P+P P+ Q         C  T P+   PKP P P   P+  P  KPV
Sbjct: 44  PAPSPSPCPSPPPKPQP-KPVPPPACPPTPPKPQ-PKPAPPPEPKPAPPPAPKPV 96



 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/54 (29%), Positives = 21/54 (38%)
 Frame = +1

Query: 640 PVKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKP 801
           P   P   P P P   +  + +  P     P    PKP P P+ +PS  P   P
Sbjct: 87  PAPPPAPKPVPCPSPPKPPAPTPKPVP---PHGPPPKPAPAPTPAPSPKPAPSP 137


>At4g38770.1 68417.m05490 proline-rich family protein (PRP4) similar
           to proline-rich protein [Arabidopsis thaliana]
           gi|6782442|gb|AAF28388; contains proline-rich extensin
           domains, INTERPRO:IPR002965
          Length = 448

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 18/53 (33%), Positives = 23/53 (43%)
 Frame = +1

Query: 643 VKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKP 801
           V  PV V  P P+++      K PC    P+   P PVP     P    +EKP
Sbjct: 222 VPPPVPVYKPPPKVELPPPIPKKPCPPKPPKIEHPPPVPVYKPPPK---IEKP 271


>At4g36360.2 68417.m05164 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           SP:P48980 from [Lycopersicon esculentum]
          Length = 855

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 799 VFLPGYGTGFSTGKALVLGN--MHGVGSIHMDLYWYLYLFVYGVKEQA 662
           V LP  G  F +    +LG   +HG+    MDL W  + +  G+K +A
Sbjct: 552 VGLPNVGGHFESWNTGILGPVALHGLSQGKMDLSWQKWTYQVGLKGEA 599


>At4g36360.1 68417.m05163 beta-galactosidase, putative / lactase,
           putative similar to beta-galactosidase precursor
           SP:P48980 from [Lycopersicon esculentum]
          Length = 856

 Score = 29.1 bits (62), Expect = 4.0
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
 Frame = -3

Query: 799 VFLPGYGTGFSTGKALVLGN--MHGVGSIHMDLYWYLYLFVYGVKEQA 662
           V LP  G  F +    +LG   +HG+    MDL W  + +  G+K +A
Sbjct: 552 VGLPNVGGHFESWNTGILGPVALHGLSQGKMDLSWQKWTYQVGLKGEA 599


>At2g39870.1 68415.m04899 expressed protein
          Length = 330

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 16/47 (34%), Positives = 23/47 (48%)
 Frame = +1

Query: 649 VPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNP 789
           +P H+   LP +++ TS+   P      R  FP   PY   SPS +P
Sbjct: 5   LPPHLSVNLPTMEKTTSSELTPT-----RLGFPNEFPYEFDSPSFSP 46


>At1g62510.1 68414.m07053 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein contains Pfam
           protease inhibitor/seed storage/LTP family domain
           PF00234
          Length = 149

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 19/51 (37%), Positives = 24/51 (47%)
 Frame = +1

Query: 694 TSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKPVALTR*STRLTAQCP 846
           T ++ G CG   P+   PK  P PS  P  NP  KP      S  + A+CP
Sbjct: 22  TISACGNCGCPSPK---PKHKPSPSPKPKPNPKPKPTPHPSPSPAI-AKCP 68


>At4g12480.1 68417.m01973 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein identical to
           pEARLI 1 (Accession No. L43080): an Arabidopsis member
           of a conserved gene family (PGF95-099), Plant Physiol.
           109 (4), 1497 (1995); contains Pfam protease
           inhibitor/seed storage/LTP family domain PF00234
          Length = 168

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 11/28 (39%), Positives = 16/28 (57%)
 Frame = +3

Query: 324 LPRRKAHPLPGRKENPLPRESARSPTLP 407
           +P  K  P+P  K  P+P  S  SP++P
Sbjct: 39  VPSPKPKPVPSPKPKPVPSPSVPSPSVP 66


>At2g23130.2 68415.m02759 arabinogalactan-protein (AGP17) identical
           to gi_11935086_gb_AAG41963
          Length = 162

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 640 PVKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKPV 804
           P   P+H P+  P   + TS +  P            P P  + +P+  PVE PV
Sbjct: 24  PATAPIHSPSTSPHKPKPTSPAISPAA----------PTPESTEAPAKTPVEAPV 68


>At2g23130.1 68415.m02760 arabinogalactan-protein (AGP17) identical
           to gi_11935086_gb_AAG41963
          Length = 185

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/55 (29%), Positives = 23/55 (41%)
 Frame = +1

Query: 640 PVKVPVHVPAPLPRIQRGTSTSKGPCG*TLPRAYFPKPVPYPSRSPSHNPVEKPV 804
           P   P+H P+  P   + TS +  P            P P  + +P+  PVE PV
Sbjct: 24  PATAPIHSPSTSPHKPKPTSPAISPAA----------PTPESTEAPAKTPVEAPV 68


>At1g55070.1 68414.m06290 F-box family protein contains Pfam
           profile: PF00646 F-box domain
          Length = 393

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 17/53 (32%), Positives = 26/53 (49%)
 Frame = +1

Query: 523 DPSPSRYMCQNLTPLKRKFMFQSKCTCPLLTQ*RRKYLYPVKVPVHVPAPLPR 681
           D  P+  + + L+ L  K M + +C C LL+   R+  Y    P+  P P PR
Sbjct: 33  DRIPADLVIKILSKLSAKSMAKCRCVCKLLSSIIRQPNYNQLFPIKYPDP-PR 84


>At1g31290.1 68414.m03829 PAZ domain-containing protein / piwi
           domain-containing protein contains Pfam profiles
           PF02170: PAZ domain, PF02171: Piwi domain
          Length = 1194

 Score = 28.3 bits (60), Expect = 7.0
 Identities = 16/29 (55%), Positives = 19/29 (65%)
 Frame = -1

Query: 405 VGLGNVHFHGVGDFLFYRVGDVLFDGVGN 319
           VG+G+V   GVGD     VGDV  DGVG+
Sbjct: 194 VGVGDVGQGGVGDVGQGGVGDVGRDGVGD 222


>At2g45810.1 68415.m05697 DEAD/DEAH box helicase, putative
          Length = 528

 Score = 27.9 bits (59), Expect = 9.3
 Identities = 13/43 (30%), Positives = 22/43 (51%)
 Frame = +2

Query: 677 PVYKEVQVPVKVHVDRPYPVHISQNQCLTRREARPITR*KNQW 805
           P Y + Q   + +V R YP  I Q Q L +++ +   + + QW
Sbjct: 55  PQYLQSQSDAQQYVQRGYPQQIQQQQQLQQQQQQQQQQQEQQW 97


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,881,025
Number of Sequences: 28952
Number of extensions: 337515
Number of successful extensions: 1244
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1047
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1208
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 2028915200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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