BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS30773 (847 letters) Database: human 237,096 sequences; 76,859,062 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. 33 0.99 AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. 33 0.99 BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein. 33 1.3 BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein. 33 1.3 AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. 33 1.3 BC131801-1|AAI31802.1| 567|Homo sapiens protein phosphatase 1, ... 32 3.0 AL121889-1|CAI19080.1| 567|Homo sapiens protein phosphatase 1, ... 32 3.0 AL031657-1|CAI20058.1| 567|Homo sapiens protein phosphatase 1, ... 32 3.0 AF362910-1|AAK52796.1| 567|Homo sapiens CAAX box protein TIMAP ... 32 3.0 AB209564-1|BAD92801.1| 593|Homo sapiens ATP-binding cassette, s... 32 3.0 AB020630-1|BAA74846.2| 578|Homo sapiens KIAA0823 protein protein. 32 3.0 AK223344-1|BAD97064.1| 263|Homo sapiens hypothetical protein FL... 31 5.3 X07876-1|CAA30725.1| 360|Homo sapiens protein ( Human mRNA for ... 31 6.9 BT019608-1|AAV38415.1| 360|Homo sapiens wingless-type MMTV inte... 31 6.9 BC078170-1|AAH78170.1| 360|Homo sapiens wingless-type MMTV inte... 31 6.9 BC029854-1|AAH29854.1| 360|Homo sapiens wingless-type MMTV inte... 31 6.9 AC002465-1|AAB67043.1| 284|Homo sapiens unknown protein. 31 6.9 BC018914-1|AAH18914.1| 263|Homo sapiens NECAP endocytosis assoc... 30 9.2 BC017014-1|AAH17014.1| 263|Homo sapiens NECAP endocytosis assoc... 30 9.2 AL669962-1|CAH71454.1| 263|Homo sapiens novel protein protein. 30 9.2 AL137802-1|CAI22843.1| 263|Homo sapiens novel protein protein. 30 9.2 AK001282-1|BAA91598.1| 263|Homo sapiens protein ( Homo sapiens ... 30 9.2 >L09190-1|AAA65582.1| 1898|Homo sapiens trichohyalin protein. Length = 1898 Score = 33.5 bits (73), Expect = 0.99 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -3 Query: 509 EQQARSTSQLRV*RGRSMRRWLE-HREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPE 333 EQQ R QLR R + +RR + REQ R HE+ +++ R+Q E+ W + E Sbjct: 423 EQQLRREQQLR--REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKRE 480 Query: 332 MRHKRTMVQRRTNML 288 +R +RR L Sbjct: 481 EETERHEQERRKQQL 495 >AL589986-1|CAH70024.1| 1943|Homo sapiens trichohyalin protein. Length = 1943 Score = 33.5 bits (73), Expect = 0.99 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%) Frame = -3 Query: 509 EQQARSTSQLRV*RGRSMRRWLE-HREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPE 333 EQQ R QLR R + +RR + REQ R HE+ +++ R+Q E+ W + E Sbjct: 404 EQQLRREQQLR--REQQLRREQQLRREQEEERHEQKHEQERREQRLKREQEERRDWLKRE 461 Query: 332 MRHKRTMVQRRTNML 288 +R +RR L Sbjct: 462 EETERHEQERRKQQL 476 >BC027450-1|AAH27450.1| 469|Homo sapiens SETD1A protein protein. Length = 469 Score = 33.1 bits (72), Expect = 1.3 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 Query: 387 RPQPLMDHHLSQHTLLTVLQPSPHTPPTLHPQLRRTPRLLF 509 RP+PL+ H L +H ++P+P P P+ P LF Sbjct: 50 RPRPLLSHILLEHNYALAVKPTPPAPALRPPEPVPAPAALF 90 >BC015621-1|AAH15621.1| 245|Homo sapiens C14orf32 protein protein. Length = 245 Score = 33.1 bits (72), Expect = 1.3 Identities = 23/67 (34%), Positives = 27/67 (40%), Gaps = 2/67 (2%) Frame = +3 Query: 651 PAVSTYAAAPIVTKVFMPPLLWLPNAGWPPVVAKYASSCLRPPTSNWF--PLVGKELTPA 824 P AAP V +PP W P A +P Y + L P SN F P P Sbjct: 178 PPPQAPGAAPPVPWGTVPPGAWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPM 237 Query: 825 PGG*QTY 845 PGG +Y Sbjct: 238 PGGPHSY 244 >AB002337-1|BAA20797.2| 1709|Homo sapiens KIAA0339 protein protein. Length = 1709 Score = 33.1 bits (72), Expect = 1.3 Identities = 14/41 (34%), Positives = 21/41 (51%) Frame = +3 Query: 387 RPQPLMDHHLSQHTLLTVLQPSPHTPPTLHPQLRRTPRLLF 509 RP+PL+ H L +H ++P+P P P+ P LF Sbjct: 1290 RPRPLLSHILLEHNYALAVKPTPPAPALRPPEPVPAPAALF 1330 >BC131801-1|AAI31802.1| 567|Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 16B protein. Length = 567 Score = 31.9 bits (69), Expect = 3.0 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -3 Query: 434 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 282 E +L K+ ERL ++K +QL+KW+ + +++H++ +R+ + G+ Sbjct: 10 ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60 >AL121889-1|CAI19080.1| 567|Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 16B protein. Length = 567 Score = 31.9 bits (69), Expect = 3.0 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -3 Query: 434 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 282 E +L K+ ERL ++K +QL+KW+ + +++H++ +R+ + G+ Sbjct: 10 ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60 >AL031657-1|CAI20058.1| 567|Homo sapiens protein phosphatase 1, regulatory (inhibitor) subunit 16B protein. Length = 567 Score = 31.9 bits (69), Expect = 3.0 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -3 Query: 434 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 282 E +L K+ ERL ++K +QL+KW+ + +++H++ +R+ + G+ Sbjct: 10 ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60 >AF362910-1|AAK52796.1| 567|Homo sapiens CAAX box protein TIMAP protein. Length = 567 Score = 31.9 bits (69), Expect = 3.0 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -3 Query: 434 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 282 E +L K+ ERL ++K +QL+KW+ + +++H++ +R+ + G+ Sbjct: 10 ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 60 >AB209564-1|BAD92801.1| 593|Homo sapiens ATP-binding cassette, sub-family F, member 1 variant protein. Length = 593 Score = 31.9 bits (69), Expect = 3.0 Identities = 16/51 (31%), Positives = 28/51 (54%) Frame = -3 Query: 443 EHREQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNM 291 EHRE+ L+K + +ER S K +S SQ EM ++ M++ +++ Sbjct: 2 EHREKKKLKKQMEYERQVASLKAANAAENDFSVSQAEMSSRQAMLENASDI 52 >AB020630-1|BAA74846.2| 578|Homo sapiens KIAA0823 protein protein. Length = 578 Score = 31.9 bits (69), Expect = 3.0 Identities = 14/51 (27%), Positives = 31/51 (60%) Frame = -3 Query: 434 EQSMLRKMVIHERLWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ 282 E +L K+ ERL ++K +QL+KW+ + +++H++ +R+ + G+ Sbjct: 21 ELQLLEKVPTLERLRAAQKRRAQQLKKWAQYEQDLQHRKRKHERKRSTGGR 71 >AK223344-1|BAD97064.1| 263|Homo sapiens hypothetical protein FLJ10420 variant protein. Length = 263 Score = 31.1 bits (67), Expect = 5.3 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQTAVAPSSGGAP 226 >X07876-1|CAA30725.1| 360|Homo sapiens protein ( Human mRNA for irp protein (int-1 related protein). ). Length = 360 Score = 30.7 bits (66), Expect = 6.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 583 LLCHLTPSTNSPWWFLRRT 639 LL LTP NS WW++R T Sbjct: 15 LLTWLTPEVNSSWWYMRAT 33 >BT019608-1|AAV38415.1| 360|Homo sapiens wingless-type MMTV integration site family member 2 protein. Length = 360 Score = 30.7 bits (66), Expect = 6.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 583 LLCHLTPSTNSPWWFLRRT 639 LL LTP NS WW++R T Sbjct: 15 LLTWLTPEVNSSWWYMRAT 33 >BC078170-1|AAH78170.1| 360|Homo sapiens wingless-type MMTV integration site family member 2 protein. Length = 360 Score = 30.7 bits (66), Expect = 6.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 583 LLCHLTPSTNSPWWFLRRT 639 LL LTP NS WW++R T Sbjct: 15 LLTWLTPEVNSSWWYMRAT 33 >BC029854-1|AAH29854.1| 360|Homo sapiens wingless-type MMTV integration site family member 2, precursor protein. Length = 360 Score = 30.7 bits (66), Expect = 6.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 583 LLCHLTPSTNSPWWFLRRT 639 LL LTP NS WW++R T Sbjct: 15 LLTWLTPEVNSSWWYMRAT 33 >AC002465-1|AAB67043.1| 284|Homo sapiens unknown protein. Length = 284 Score = 30.7 bits (66), Expect = 6.9 Identities = 11/19 (57%), Positives = 13/19 (68%) Frame = +1 Query: 583 LLCHLTPSTNSPWWFLRRT 639 LL LTP NS WW++R T Sbjct: 15 LLTWLTPEVNSSWWYMRAT 33 >BC018914-1|AAH18914.1| 263|Homo sapiens NECAP endocytosis associated 2 protein. Length = 263 Score = 30.3 bits (65), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226 >BC017014-1|AAH17014.1| 263|Homo sapiens NECAP endocytosis associated 2 protein. Length = 263 Score = 30.3 bits (65), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226 >AL669962-1|CAH71454.1| 263|Homo sapiens novel protein protein. Length = 263 Score = 30.3 bits (65), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226 >AL137802-1|CAI22843.1| 263|Homo sapiens novel protein protein. Length = 263 Score = 30.3 bits (65), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226 >AK001282-1|BAA91598.1| 263|Homo sapiens protein ( Homo sapiens cDNA FLJ10420 fis, clone NT2RP1000170. ). Length = 263 Score = 30.3 bits (65), Expect = 9.2 Identities = 16/36 (44%), Positives = 20/36 (55%), Gaps = 1/36 (2%) Frame = -1 Query: 832 PPGAGVSSL-PTKGNQLEVGGLRQELAYLATTGGQP 728 PPG S+L P G QL VGG + A ++GG P Sbjct: 191 PPGGKTSTLIPPPGEQLAVGGSLVQPAVAPSSGGAP 226 Database: human Posted date: Oct 23, 2007 1:18 PM Number of letters in database: 76,859,062 Number of sequences in database: 237,096 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 117,124,348 Number of Sequences: 237096 Number of extensions: 2737242 Number of successful extensions: 7620 Number of sequences better than 10.0: 22 Number of HSP's better than 10.0 without gapping: 7039 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 7618 length of database: 76,859,062 effective HSP length: 89 effective length of database: 55,757,518 effective search space used: 10705443456 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
- SilkBase 1999-2023 -