Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30773
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132860-29|CAB60505.2|  386|Caenorhabditis elegans Hypothetical...    34   0.11 
U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical p...    30   1.8  
AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate o...    30   1.8  
Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical ...    29   5.5  
Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81529-3|CAB04300.1|  224|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81529-1|CAB04294.1|  224|Caenorhabditis elegans Hypothetical pr...    28   7.3  
Z81050-2|CAB02852.1|  526|Caenorhabditis elegans Hypothetical pr...    28   7.3  
AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical...    28   7.3  
AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical ...    28   9.6  

>AL132860-29|CAB60505.2|  386|Caenorhabditis elegans Hypothetical
           protein Y56A3A.28 protein.
          Length = 386

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = +1

Query: 397 RSWITIFRNILCSRCSSHRRILRPRYTRSCDVLRACCSKAIAPAVAYAATCGCLQDHQSW 576
           RSW +I R+ LC  C  + R  R  Y  + D L     + +A +V+  A     ++ + W
Sbjct: 10  RSWTSISRHFLCLECRKYFRNKREFYWHTEDCLMEAFEREVALSVSRGADEDIAENEEEW 69


>U53139-13|AAK18939.1|  334|Caenorhabditis elegans Hypothetical
           protein F18E3.7a protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 368 KQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQIRDGRSSNGLSEDWSSTV 201
           K +++WS  +P  +H R   Q+RT+ +G     M+V     G  SNG +  W + +
Sbjct: 270 KIIKEWSALRPGRKHVRIEAQKRTS-VGNSKDYMVVHHY--GHGSNGFTLGWGTAI 322


>AB275892-1|BAF34315.1|  334|Caenorhabditis elegans D-aspartate
           oxidase protein.
          Length = 334

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 368 KQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQIRDGRSSNGLSEDWSSTV 201
           K +++WS  +P  +H R   Q+RT+ +G     M+V     G  SNG +  W + +
Sbjct: 270 KIIKEWSALRPGRKHVRIEAQKRTS-VGNSKDYMVVHHY--GHGSNGFTLGWGTAI 322


>Z68132-2|CAA92220.2|  762|Caenorhabditis elegans Hypothetical
           protein F09C8.2 protein.
          Length = 762

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -3

Query: 293 MLGQ*HMSMLVQQIRDGRSSNGLSEDWSSTVG 198
           M G  + S LVQQ++  +   G++E+W+ T G
Sbjct: 1   MTGYGYNSNLVQQVQQPQVLQGVNEEWTHTTG 32


>AC006644-5|AAF39834.1|  786|Caenorhabditis elegans Hypothetical
           protein F55A3.2 protein.
          Length = 786

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 16/47 (34%), Positives = 22/47 (46%)
 Frame = +1

Query: 280 YWPSIFVRRCTIVRLCRISGCDQDHFSSCFLSIFLLVHNRSWITIFR 420
           YW SIF+R C I  LC+ +      +S  F       H +  IT F+
Sbjct: 589 YWLSIFLRSCGIDWLCKSNNICSAAWSLVFRDSNKTSHQQYAITYFK 635


>Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical
           protein T23H4.3 protein.
          Length = 360

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
 Frame = +1

Query: 457 ILRPRYTRSCDVLRA-CCSKAIAPAVAYAATCGCLQDHQSWQ 579
           +L+ R   +C V+   CCS   AP      T G   D   WQ
Sbjct: 312 MLKSREMLNCKVMATFCCSSCSAPTSTTTTTSGTPSDGSLWQ 353


>Z81529-3|CAB04300.1|  224|Caenorhabditis elegans Hypothetical
           protein F35E8.4 protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +1

Query: 283 WPSIFVRRC-TIVRLCRISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNILCSRCSSHR 453
           W ++  + C +    C   GC  D  + C   LSI L V  + ++  +    C RCS+  
Sbjct: 115 WRTVIAQDCPSACGFCNEGGC-VDAITDCGDDLSICLNVKMQDFVNQYCQKTCKRCSAAT 173

Query: 454 RILRPRYTRSCDV 492
            +  P  T +C V
Sbjct: 174 TV-APPVTNNCTV 185


>Z81529-1|CAB04294.1|  224|Caenorhabditis elegans Hypothetical
           protein F35E8.1 protein.
          Length = 224

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 3/73 (4%)
 Frame = +1

Query: 283 WPSIFVRRC-TIVRLCRISGCDQDHFSSCF--LSIFLLVHNRSWITIFRNILCSRCSSHR 453
           W ++  + C +    C   GC  D  + C   LSI L V  + ++  +    C RCS+  
Sbjct: 115 WRTVIAQDCPSACGFCNEGGC-VDAITDCGDDLSICLNVKMQDFVNQYCQKTCKRCSAAT 173

Query: 454 RILRPRYTRSCDV 492
            +  P  T +C V
Sbjct: 174 TV-APPVTNNCTV 185


>Z81050-2|CAB02852.1|  526|Caenorhabditis elegans Hypothetical
           protein C50B6.3 protein.
          Length = 526

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 16/66 (24%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -3

Query: 395 LWTSKKILRKQLEKWSWSQPEMRHKRTMVQRRTNMLGQ*HMSMLVQQIRD-GRSSNGLSE 219
           L+T K  + K  + W   +PE R+    V +   +L   + ++L+ Q+ D G     +S 
Sbjct: 21  LFTKKPSVWKDFDNWINDEPENRYDLFQVVKSAMLLQSGYTTILMDQVTDNGADELRISL 80

Query: 218 DWSSTV 201
           ++S+ +
Sbjct: 81  EYSNFI 86


>AC024809-10|AAF59547.1|  272|Caenorhabditis elegans Hypothetical
           protein Y53G8AR.1 protein.
          Length = 272

 Score = 28.3 bits (60), Expect = 7.3
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +1

Query: 583 LLCHLTPSTNSPWW 624
           L C+LTP++N+ WW
Sbjct: 158 LTCYLTPTSNTAWW 171


>AF016687-5|AAC48093.1|  709|Caenorhabditis elegans Hypothetical
           protein T21D12.11 protein.
          Length = 709

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -2

Query: 216 LEQHRRQRCGHRERCELSKKRP 151
           +E HRR+RC  ++RC  + + P
Sbjct: 320 VECHRRRRCSRKQRCHTTTQPP 341


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,950,791
Number of Sequences: 27780
Number of extensions: 359365
Number of successful extensions: 1124
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1122
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)