Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30772
(825 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 30 0.075
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 29 0.17
AY118017-1|AAM66816.1| 120|Anopheles gambiae glucose-6-phosphat... 28 0.40
AY118011-1|AAM66810.1| 120|Anopheles gambiae glucose-6-phosphat... 28 0.40
AY118001-1|AAM66800.1| 120|Anopheles gambiae glucose-6-phosphat... 28 0.40
AY117999-1|AAM66798.1| 120|Anopheles gambiae glucose-6-phosphat... 28 0.40
AY117995-1|AAM66794.1| 120|Anopheles gambiae glucose-6-phosphat... 28 0.40
AY118012-1|AAM66811.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY118010-1|AAM66809.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY118002-1|AAM66801.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY118000-1|AAM66799.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY117998-1|AAM66797.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY117994-1|AAM66793.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.2
AF317817-1|AAL18436.1| 137|Anopheles gambiae glucose-6-phosphat... 26 1.2
AY117997-1|AAM66796.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.6
AY117996-1|AAM66795.1| 120|Anopheles gambiae glucose-6-phosphat... 26 1.6
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 24 4.9
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 30.3 bits (65), Expect = 0.075
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 2/90 (2%)
Frame = +2
Query: 257 ERNKELETALRQHQNVIEDQ--AQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 430
E +LE ++ ++ IE Q ++IEYLT+ V+ R Y QL +++ ER
Sbjct: 202 EIEPKLEKLRKEREHYIEFQKVCRDIEYLTRLYVSYR---------YLQLCKGVEESERT 252
Query: 431 NHRLAVDHAADKKHIKSLCSNIDTVEPNAK 520
L ++ I+S C+ T+E AK
Sbjct: 253 IANLQSVIGESEQKIESNCATAQTLEQEAK 282
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 29.1 bits (62), Expect = 0.17
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Frame = +3
Query: 123 TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDL-QLAAELGKTLSNATRNSRQPFASIK 299
T ++ D+V++ G N E +D+L L DL Q+ ++ K+ R S +
Sbjct: 929 TQDKLEDVVEELEGKNRE--RDELIRYSTALRDLTQMMRDIRKS-----RFSHLHKLTTH 981
Query: 300 MLLKIKHKKSNILQSKRLL 356
M L++KHK +NI+Q + L
Sbjct: 982 MALRVKHKFTNIMQIRNYL 1000
>AY118017-1|AAM66816.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 27.9 bits (59), Expect = 0.40
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQA++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQAEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118011-1|AAM66810.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 27.9 bits (59), Expect = 0.40
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQA++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQAEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118001-1|AAM66800.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 27.9 bits (59), Expect = 0.40
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQA++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQAEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY117999-1|AAM66798.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 27.9 bits (59), Expect = 0.40
Identities = 22/60 (36%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
ELE RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELEEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY117995-1|AAM66794.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 27.9 bits (59), Expect = 0.40
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQA++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQAEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118012-1|AAM66811.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118010-1|AAM66809.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118002-1|AAM66801.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY118000-1|AAM66799.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY117998-1|AAM66797.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY117994-1|AAM66793.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 26.2 bits (55), Expect = 1.2
Identities = 22/60 (36%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQA++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYIKVQEDQAEKFEEFWSVNFYVAGSCDSR-RDFELLNQEISKFEVGRAANRL 72
>AF317817-1|AAL18436.1| 137|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 137
Score = 26.2 bits (55), Expect = 1.2
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 22 ELKEKCRQYMKVQEDQVEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 80
>AY117997-1|AAM66796.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 25.8 bits (54), Expect = 1.6
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQMEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AY117996-1|AAM66795.1| 120|Anopheles gambiae glucose-6-phosphate
dehydrogenase protein.
Length = 120
Score = 25.8 bits (54), Expect = 1.6
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 2/60 (3%)
Frame = +2
Query: 269 ELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL--ELSIQDLERANHRL 442
EL+ RQ+ V EDQ ++ E + DSR R +E L E+S ++ RA +RL
Sbjct: 14 ELKEKCRQYMKVQEDQMEKFEEFWSVNFYVAGSYDSR-RDFELLNQEISKFEVGRAANRL 72
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 24.2 bits (50), Expect = 4.9
Identities = 17/78 (21%), Positives = 37/78 (47%)
Frame = +2
Query: 275 ETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRLAVDH 454
E +L + Q QEIE ++ +++ + + +Q+E + R LA +
Sbjct: 856 EDSLETFKQAEARQRQEIEKDKEKIELMKQEKAAHKTLVDQMEEEMAKARREVQALAKEL 915
Query: 455 AADKKHIKSLCSNIDTVE 508
AA + I ++ S I++++
Sbjct: 916 AAIHQSIANIESRIESMK 933
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 763,376
Number of Sequences: 2352
Number of extensions: 14544
Number of successful extensions: 61
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -