Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30770
         (827 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4YAD4 Cluster: Putative uncharacterized protein; n=3; ...    36   1.6  
UniRef50_Q4UHM3 Cluster: Putative uncharacterized protein; n=1; ...    34   3.8  

>UniRef50_Q4YAD4 Cluster: Putative uncharacterized protein; n=3;
           Plasmodium (Vinckeia)|Rep: Putative uncharacterized
           protein - Plasmodium berghei
          Length = 883

 Score = 35.5 bits (78), Expect = 1.6
 Identities = 28/95 (29%), Positives = 47/95 (49%)
 Frame = +2

Query: 221 LRTLDCIKLKRFSQMLTYNAI*CLFFTFVISYNIKELITVWSWFHRNNIDK*IYRFRSFQ 400
           L+TL   K+  F++++T       ++T+ I  NI   I + S  ++  IDK   +     
Sbjct: 93  LKTLKDDKINIFNEIVTNIQSENKYYTYFIYKNILSKIDLISDMNKKKIDKDKEKNIKNI 152

Query: 401 TQYLSEFPSV*M*TLKHN*DIVIETVNNIVRVNKE 505
           TQ L  F +  M   K+  D++IE   NI + N+E
Sbjct: 153 TQNLEVFKNKLMDIKKNIRDVIIEKFENIKKTNEE 187


>UniRef50_Q4UHM3 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 578

 Score = 34.3 bits (75), Expect = 3.8
 Identities = 20/62 (32%), Positives = 32/62 (51%)
 Frame = -2

Query: 520 FKYTAFFVNTYNIINSFNDNILVMFQSLHLDAREFRQILCLE*TKTINSLVNIVTMKPRP 341
           F Y  FF+NT NI N+  DN+     +L+ + ++    + LE  K I +   I+ +  R 
Sbjct: 10  FIYNKFFINTININNNLKDNLKNNNNNLNNNLKDNLNEILLEKQKFIGNNKKIIKLFNRN 69

Query: 340 NS 335
           NS
Sbjct: 70  NS 71


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 740,036,587
Number of Sequences: 1657284
Number of extensions: 13624228
Number of successful extensions: 26430
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 25468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26429
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 71734006925
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)