Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS30769
         (847 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory recept...    23   3.0  
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    23   4.0  
AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    23   4.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    23   4.0  
AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    22   5.3  

>AM292362-1|CAL23174.2|  398|Tribolium castaneum gustatory receptor
           candidate 41 protein.
          Length = 398

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 6/23 (26%), Positives = 14/23 (60%)
 Frame = -2

Query: 201 HSAYQRSQFIKKNENLFDNLCTI 133
           HS +     +K+++NL + +C +
Sbjct: 200 HSTHLNGDIVKEHQNLHNKICNL 222


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/35 (34%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -3

Query: 188 KDHNSLKKMKTYLIISVRSI-FIPNTYTLFWIEAF 87
           KDHNSL  +   L I+V  I  + ++Y + ++  F
Sbjct: 245 KDHNSLYSLHLLLWITVTFILLVGDSYIVMYVFFF 279


>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 128 FIPNTYTLFWIEAFSVG 78
           F P  Y+L WI  F++G
Sbjct: 28  FSPKGYSLLWILLFTLG 44


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 12/39 (30%), Positives = 17/39 (43%)
 Frame = -2

Query: 225 NGTVSNRKHSAYQRSQFIKKNENLFDNLCTIHFHSEHIH 109
           N  + N+K+S  Q +Q    N    +N    H    HIH
Sbjct: 293 NRRMKNKKNSQRQAAQQQNNNNAATNNQNHHHHAGHHIH 331


>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 8/26 (30%), Positives = 13/26 (50%)
 Frame = +1

Query: 247 FVINKRCAIEKQLLSHLQCFSVHKNP 324
           FV      + K  ++HL  + +H NP
Sbjct: 90  FVTCNGLKLPKSTITHLHIYDLHHNP 115


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,809
Number of Sequences: 336
Number of extensions: 4363
Number of successful extensions: 9
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23348025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)