Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS30767
(763 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 29 0.16
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 27 0.63
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta... 26 1.5
AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein. 25 3.4
AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein. 25 3.4
AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein. 25 3.4
AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein. 25 3.4
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 3.4
AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr... 25 3.4
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 24 4.5
AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubu... 24 4.5
AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein ... 23 7.8
AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal ... 23 7.8
AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced ... 23 7.8
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 29.1 bits (62), Expect = 0.16
Identities = 16/46 (34%), Positives = 24/46 (52%)
Frame = +3
Query: 186 ETASEEDPDN*KRARPDTGVSHAVNGKLEEKEKALQNAESEVAALN 323
ETA ++ +N R T AV GKL+E A+Q+ S+ L+
Sbjct: 544 ETAKQKLQENANEERELTQTLRAVQGKLQESMAAMQSTRSQGKVLD 589
Score = 29.1 bits (62), Expect = 0.16
Identities = 12/61 (19%), Positives = 37/61 (60%)
Frame = +1
Query: 67 IKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQES 246
++++++ MKL + A + ++ +++ R + + + + ++ +QTIE +L +T+++
Sbjct: 968 LREELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQILQTIETKLQETKDT 1027
Query: 247 L 249
L
Sbjct: 1028 L 1028
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 27.1 bits (57), Expect = 0.63
Identities = 18/74 (24%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
Frame = +1
Query: 73 KKMQAMKLEKDNALDRAA--MCEQQAKDANLRAEKAEEEA--RQLQKKIQTIENELDQTQ 240
KK+Q L + L + A + E + ++ LR E +LQK I+ + +LDQ +
Sbjct: 754 KKLQQELLTNEQQLQQLAGVVFEGETEETTLREELEHSRTILAKLQKGIEEEQAKLDQVR 813
Query: 241 ESLMQLTESSKRRR 282
++ Q ++++ ++
Sbjct: 814 RTVQQEEQTAQAKK 827
>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative
TPR-containing phosphoprotein protein.
Length = 1200
Score = 25.8 bits (54), Expect = 1.5
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = +1
Query: 136 QQAKDANLRAEKAEEEARQLQKKIQTIENELDQTQESLMQLTESSKRR 279
QQA+ RA K +EE R L++K + E + Q + E +R+
Sbjct: 821 QQAQYHVSRARKIDEEERSLRQKQELEREEFKRRQAEDRRRMEEMRRK 868
Score = 24.2 bits (50), Expect = 4.5
Identities = 17/67 (25%), Positives = 27/67 (40%), Gaps = 5/67 (7%)
Frame = +2
Query: 275 EGEGSAER*VRSGCPEPTYPTAGGGPRE-----VRGASRDRHRQAVRGQPGRR*IRANTQ 439
EG G+ + R G +P GGG R+ RG+ D + G+ R+ +
Sbjct: 929 EGSGAPKERKRKGEKKPRKSQGGGGSRKRKEKARRGSGGDSDSEEEEGEGSRKRKKKGAS 988
Query: 440 GAGEPHQ 460
G + Q
Sbjct: 989 GGQKKRQ 995
>AY341195-1|AAR13759.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 381 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQATSFAEESDKKYEEVARK 560
A +L A + A+++ + N +A + Q+ +++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 561 LVLMEQDLERAEE 599
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341194-1|AAR13758.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 381 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQATSFAEESDKKYEEVARK 560
A +L A + A+++ + N +A + Q+ +++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 561 LVLMEQDLERAEE 599
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341193-1|AAR13757.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 381 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQATSFAEESDKKYEEVARK 560
A +L A + A+++ + N +A + Q+ +++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 561 LVLMEQDLERAEE 599
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AY341192-1|AAR13756.1| 294|Anopheles gambiae laminin protein.
Length = 294
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 381 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQATSFAEESDKKYEEVARK 560
A +L A + A+++ + N +A + Q+ +++ AEE+ + R+
Sbjct: 213 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 272
Query: 561 LVLMEQDLERAEE 599
+V L+RAEE
Sbjct: 273 IVNSRDLLQRAEE 285
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 24.6 bits (51), Expect = 3.4
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 5/70 (7%)
Frame = +1
Query: 73 KKMQAMKLEKDNALDRAAMC-----EQQAKDANLRAEKAEEEARQLQKKIQTIENELDQT 237
KK+Q K + +++ AM E+Q K+ R + E++ +KKIQ I +LD+
Sbjct: 968 KKLQDSKDKMSRNVNQKAMVLLEREEEQYKEVMRRKKVVEDD----KKKIQAIITDLDEE 1023
Query: 238 QESLMQLTES 267
++ +++ S
Sbjct: 1024 KKKKLKVAWS 1033
Score = 23.4 bits (48), Expect = 7.8
Identities = 11/42 (26%), Positives = 21/42 (50%)
Frame = +3
Query: 489 EAQLSQATSFAEESDKKYEEVARKLVLMEQDLERAEERAETK 614
E ++ S ES++K E +EQ+ + +ER +T+
Sbjct: 250 ERTIANLQSVIGESEQKIESNCATAQTLEQEAKELQERIDTE 291
>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
precursor protein.
Length = 1623
Score = 24.6 bits (51), Expect = 3.4
Identities = 17/73 (23%), Positives = 34/73 (46%)
Frame = +3
Query: 381 ATAKLSEASQAADESERIRKALENRTNMEDDRVAILEAQLSQATSFAEESDKKYEEVARK 560
A +L A + A+++ + N +A + Q+ +++ AEE+ + R+
Sbjct: 1352 ALKQLKYAKEQAEKAVAEGDGTLQKANYTYQTLAGFKNQVEESSRRAEEALNLVPNIERQ 1411
Query: 561 LVLMEQDLERAEE 599
+V L+RAEE
Sbjct: 1412 IVNSRDLLQRAEE 1424
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 24.2 bits (50), Expect = 4.5
Identities = 18/87 (20%), Positives = 36/87 (41%), Gaps = 10/87 (11%)
Frame = +1
Query: 70 KKKMQAMKLEKDNALDRAAMCEQQAKDANLRAEKAEEEARQLQK----------KIQTIE 219
+++ Q + E D ++ E K+ R + E+ R LQ+ K++ E
Sbjct: 618 RQEHQRLVRECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQTKMKVKRQE 677
Query: 220 NELDQTQESLMQLTESSKRRRRLCRTL 300
+ + L+ + E + R CRT+
Sbjct: 678 QKCKELTARLVNVDEEKVKFERSCRTI 704
>AJ438610-1|CAD27473.1| 838|Anopheles gambiae putative microtubule
binding protein protein.
Length = 838
Score = 24.2 bits (50), Expect = 4.5
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = -2
Query: 624 FAIALFRRVPPPSLGPAP*EQACAPPLRISCPTPRRMKLPVTVEPPR 484
F + R PP + AP A P P P+ M+ P V PPR
Sbjct: 156 FPAPISHRPPPIAHQQAPFAMDPARPNPGMPPGPQMMRPPGNVGPPR 202
>AY957503-1|AAY41942.1| 596|Anopheles gambiae vasa-like protein
protein.
Length = 596
Score = 23.4 bits (48), Expect = 7.8
Identities = 11/25 (44%), Positives = 13/25 (52%)
Frame = +2
Query: 524 GVGQEIRRGGAQACSYGAGPREGGG 598
G G RGG + G G R+GGG
Sbjct: 68 GRGGRGGRGGGRGRGRGRGGRDGGG 92
>AY187044-1|AAO39758.1| 87|Anopheles gambiae putative antennal
carrier protein AP-2 protein.
Length = 87
Score = 23.4 bits (48), Expect = 7.8
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 4/58 (6%)
Frame = +1
Query: 46 KTTKMDAIKKKMQAMKLEKDNALDRAAMCEQQAKDANLRAE----KAEEEARQLQKKI 207
K DA K L LD+ A+ KDA + E KA+++A ++ KK+
Sbjct: 24 KDAAKDATDKVKDKAALPDAPKLDKDAVTTPDPKDAAKKVEDAAGKAKDQAAEVGKKL 81
>AF080564-1|AAC31944.1| 372|Anopheles gambiae Sex combs reduced
homeotic protein protein.
Length = 372
Score = 23.4 bits (48), Expect = 7.8
Identities = 10/28 (35%), Positives = 15/28 (53%)
Frame = +2
Query: 428 ANTQGAGEPHQHGG*SRCHLGGSTVTGN 511
++ +G PH + R H+G STV N
Sbjct: 250 SSKKGGPPPHIYPWMKRVHIGQSTVNAN 277
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 635,703
Number of Sequences: 2352
Number of extensions: 13206
Number of successful extensions: 56
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 56
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79002570
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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